FFCP PHASE1:Hg19::chr7:116435806..116435810,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7029 | |||
|TSSclassifier=not | |||
|UniProt=A0PJF7 | |||
|association_with_transcript=0bp_to_BC027979_5end | |||
|description=CAGE_peak_10_at_MET_5end | |||
|id=chr7:116435806..116435810,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.07e-32!254;CL:0002076!6.84e-11!43;CL:0000223!2.48e-10!59;CL:0000220!3.19e-10!246;CL:0002321!6.91e-10!248;CL:0000077!1.90e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.55e-07;19!CL:0000317;7.28e-07;2!CL:1000448;7.28e-07;2!CL:0002308;7.28e-07;2!CL:0002140;7.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-14,253;CL:0000077,2.65e-07,19;CL:0000317,9.90e-07,2;CL:1000448,9.90e-07,2;CL:0002308,9.90e-07,2;CL:0002140,9.90e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.35e-07;29 | |||
|ontology_enrichment_disease=DOID:305!8.02e-26!106;DOID:0050687!6.52e-24!143;DOID:14566!3.42e-16!239;DOID:162!3.93e-14!235;DOID:299!3.46e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.16e-10;3!DOID:127;2.16e-10;3!DOID:0060072;6.99e-08;4!DOID:4468;7.08e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.51e-12,106;DOID:0050687,5.27e-11,143;DOID:0060084,2.95e-10,3;DOID:127,2.95e-10,3;DOID:14566,5.48e-10,239;DOID:162,4.05e-08,235;DOID:4468,7.88e-08,2;DOID:0060072,8.78e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.41e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.66e-12;9!UBERON:0001557;8.66e-12;9!UBERON:0000065;8.90e-08;44!UBERON:0000072;2.39e-07;37!UBERON:0002419;7.28e-07;2!UBERON:0007771;7.28e-07;2!UBERON:0003297;7.28e-07;2!UBERON:0001821;7.28e-07;2!UBERON:0003487;7.28e-07;2!UBERON:0001820;7.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.76e-12,9;UBERON:0000065,7.49e-08,54;UBERON:0008947,1.46e-07,38;UBERON:0003258,1.46e-07,38;UBERON:0001557,3.83e-07,19;UBERON:0000072,7.53e-07,47;UBERON:0002419,9.90e-07,2;UBERON:0007771,9.90e-07,2;UBERON:0003297,9.90e-07,2;UBERON:0001821,9.90e-07,2;UBERON:0003487,9.90e-07,2;UBERON:0001820,9.90e-07,2;UBERON:0005089,9.90e-07,2;UBERON:0005088,9.90e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0.286235987131057,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,1.10926203050036,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0.612167784741805,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0.43917392846563,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0.633152558322899,0,1.14734648299525,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0.211931901159562,1.20036438433761,0.206105058476878,0.515281080091258,0.37223371266318,1.85653965465393,0.389748020644795,0.504867548488229,0.0920498986422993,0.161646056818812,1.06502877754984,0.604512589365842,0.169560592310488,0.57978255948989,1.36373060295417,0,0,0,0.464775771478074,0,0,0,0,0,0,0.464367928031979,0,2.01121560067735,1.51726221070292,1.92808823906786,2.09558548191549,1.74303555273925,0.71181185733329,0.808987848960987,0.588664395376038,1.53898862778556,0,0,0,0,1.26755034821831,0,0,0,0.491953754172454,0.171567810298526,0.768251997860379,0,0.703702806881416,0.648119116109707,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0.567100388969546,0.626909658919938,0.871901815541886,0,0,0,0,0,0,1.07946420296687,0,0,0,0.308482478109971,0.901029173531752,2.00078502841405,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,1.43833425785268,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,2.3195768543631,0.788512075169673,0.702848489956279,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.581051892299796,0.362578348774867,1.80455823272956,2.20994373446151,0.229628896329213,0.728364672026868,0.131124414959424,0,0.693138033939733,0,0,0.949964660035881,0,0,0.647747748306418,0,0,1.00337954770971,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0,1.14853107599234,1.30012049207304,0,0,0.154048617114644,0,0.275673144969061,0.322260734604821,0.290033387828457,0.255679882248303,0,1.4875642382488,0.768760269460425,0.510450849978337,1.11273558941105,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,1.58510321173008,0,0,0.731140468893853,0,0,0,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0,0.633322905892992,0.329294892959902,0.379473173765715,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,1.19372242368845,0.890894042497916,2.45728561679386,0,0,0.222617410045812,0,0,0,0,0.251932747854276,0,0,0.622079175323615,0.988551862620595,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.796554137998498,0.762760950878299,1.18193840883968,0,0,0.520874984799877,0,0,0,0,0,0,0,0.697118721393016,0.230850775511391,0.341826167541004,0,0,0.54323685961004,2.23300811812344,0.732780747214898,2.66517388009317,0,0,0,0,0,0,0,0,11.6048935490415,2.12202650606892,0.424059214301822,0.432777279484182,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0.138674673013139,0.520679215005393,0.195984794828755,0.522355239482415,0,0.171986032471617,0.967563312890852,0.292357268344742,0.574808199372465,0,0,0,0.137041924646751,0.19871461170299,0,0,0.400794101257669,0.213452994739353,0.599428828746391,4.32271251462318,0,0,1.58460277786965,0.248505071130865,0,0.135904206073614,0,0.101998217636322,0.866851769704557,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.393709926058995,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0.211200673038813,0.537862017998534,0.383830394638891,0,0,0,1.08599920350743,3.45688596480507,2.61269888087527,0,0.082092520749339,0.851940108927109,0.339936274560377,0.293104467356165,0,0,0,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0.886068179966986,1.58634144372552,0.1251909307065,0,0,0,0.138348634936231,0,0.606596470166591,1.7127920012698,1.88212655758537,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.147855149989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| |||
|short_description=p10@MET | |||
}} |
Revision as of 18:57, 22 January 2014
Short description: | p10@MET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_MET_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC027979_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | A0PJF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-14 | 253 |
mesothelial cell | 2.65e-07 | 19 |
sebum secreting cell | 9.90e-07 | 2 |
epithelial cell of sweat gland | 9.90e-07 | 2 |
epithelial cell of skin gland | 9.90e-07 | 2 |
acinar cell of sebaceous gland | 9.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.76e-12 | 9 |
respiratory tract | 7.49e-08 | 54 |
respiratory primordium | 1.46e-07 | 38 |
endoderm of foregut | 1.46e-07 | 38 |
upper respiratory tract | 3.83e-07 | 19 |
segment of respiratory tract | 7.53e-07 | 47 |
skin gland | 9.90e-07 | 2 |
epidermis gland | 9.90e-07 | 2 |
gland of integumental system | 9.90e-07 | 2 |
sebaceous gland | 9.90e-07 | 2 |
skin sebaceous gland | 9.90e-07 | 2 |
sweat gland | 9.90e-07 | 2 |
sweat gland placode | 9.90e-07 | 2 |
sebaceous gland placode | 9.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.51e-12 | 106 |
cell type cancer | 5.27e-11 | 143 |
cell type benign neoplasm | 2.95e-10 | 3 |
leiomyoma | 2.95e-10 | 3 |
disease of cellular proliferation | 5.48e-10 | 239 |
cancer | 4.05e-08 | 235 |
clear cell adenocarcinoma | 7.88e-08 | 2 |
benign neoplasm | 8.78e-08 | 4 |