FFCP PHASE1:Mm9::chr2:160787107..160787116,-: Difference between revisions
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{{FFCP|EntrezGene=71389|HGNC=|MCL_coexpression_id=173|UniProt=|association_with_transcript=140bp_to_ENSMUST00000143081,uc008nro.1_5end|description=CAGE_peak_6_at_Chd6_5end|id=chr2:160787107..160787116,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.34e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.64e-20!14;UBERON:0003918!1.64e-20!14;UBERON:0005095!1.64e-20!14;UBERON:0007687!1.64e-20!14;UBERON:0006554!9.14e-18!16;UBERON:0001008!1.24e-16!17;UBERON:0000489!3.49e-13!21;UBERON:0003103!4.65e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.80e-15,14;UBERON:0003918,7.80e-15,14;UBERON:0011143,7.80e-15,14;UBERON:0005095,7.80e-15,14;UBERON:0007687,7.80e-15,14;UBERON:0006554,9.50e-12,18;UBERON:0001008,3.53e-11,19;UBERON:0000489,3.37e-10,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,1.4255592949172,0.969762435838129,1.05203729835478,0.632365371242573,0.295220295959204,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Chd6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71389 | |||
|HGNC= | |||
|MCL_coexpression_id=173 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=140bp_to_ENSMUST00000143081,uc008nro.1_5end | |||
|cluster_id=chr2:160787107..160787116,- | |||
|description=CAGE_peak_6_at_Chd6_5end | |||
|id=chr2:160787107..160787116,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.34e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.64e-20!14;UBERON:0003918!1.64e-20!14;UBERON:0005095!1.64e-20!14;UBERON:0007687!1.64e-20!14;UBERON:0006554!9.14e-18!16;UBERON:0001008!1.24e-16!17;UBERON:0000489!3.49e-13!21;UBERON:0003103!4.65e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.80e-15,14;UBERON:0003918,7.80e-15,14;UBERON:0011143,7.80e-15,14;UBERON:0005095,7.80e-15,14;UBERON:0007687,7.80e-15,14;UBERON:0006554,9.50e-12,18;UBERON:0001008,3.53e-11,19;UBERON:0000489,3.37e-10,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,1.4255592949172,0.969762435838129,1.05203729835478,0.632365371242573,0.295220295959204,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Chd6 | |||
}} |
Revision as of 10:47, 4 August 2015
Short description: | p6@Chd6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Chd6_5end |
Coexpression cluster: | MCL_coexpression_mm9:173 |
Association with transcript: | 140bp_to_ENSMUST00000143081, uc008nro.1_5end |
EntrezGene: | 71389 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
kidney | 7.80e-15 | 14 |
kidney mesenchyme | 7.80e-15 | 14 |
upper urinary tract | 7.80e-15 | 14 |
kidney rudiment | 7.80e-15 | 14 |
kidney field | 7.80e-15 | 14 |
urinary system structure | 9.50e-12 | 18 |
renal system | 3.53e-11 | 19 |
cavitated compound organ | 3.37e-10 | 21 |