FFCP PHASE1:Hg19::chr7:105603672..105603679,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222256 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26308 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZTQ4 | |||
|association_with_transcript=-5bp_to_ENST00000317716_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_12_at_CDHR3_5end | |||
|id=chr7:105603672..105603679,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.03e-10;29 | |||
|ontology_enrichment_disease=DOID:0050619!5.75e-09!1;DOID:1357!5.75e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!5.79e-24!3;UBERON:0005290!5.79e-24!3;UBERON:0010096!5.79e-24!3;UBERON:0007023!8.60e-21!115;UBERON:0000341!7.30e-17!2;UBERON:0001301!2.04e-09!1;UBERON:0002336!2.40e-09!1;UBERON:0001018!2.40e-09!1;UBERON:0002473!2.40e-09!1;UBERON:0005340!2.40e-09!1;UBERON:0002316!2.40e-09!1;UBERON:0003544!2.40e-09!1;UBERON:0001020!2.40e-09!1;UBERON:0005970!2.40e-09!1;UBERON:0002437!2.40e-09!1;UBERON:0002298!2.46e-09!8;UBERON:0006834!4.19e-09!1;UBERON:0001764!5.75e-09!1;UBERON:0001825!5.75e-09!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0000369!1.83e-08!4;UBERON:0002435!1.83e-08!4;UBERON:0000204!1.83e-08!4;UBERON:0010082!1.83e-08!4;UBERON:0001049!1.89e-07!57;UBERON:0005068!1.89e-07!57;UBERON:0006241!1.89e-07!57;UBERON:0007135!1.89e-07!57;UBERON:0002616!3.63e-07!59;UBERON:0000349!5.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.61e-34;2!UBERON:0001896;3.66e-23;3!UBERON:0005290;3.66e-23;3!UBERON:0002298;2.59e-12;6!UBERON:0003126;8.16e-11;7!UBERON:0001005;8.16e-11;7!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.61e-34,2;UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0002298,2.74e-12,6;UBERON:0003126,8.16e-11,7;UBERON:0001005,8.16e-11,7;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.741412462787447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,1.72924735609633,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,1.14681839138014,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.639701945702943,0.476128862927481,0,0,0,0,0,0,0,0,2.15166616178029,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p12@CDHR3 | |||
}} |
Revision as of 18:37, 22 January 2014
Short description: | p12@CDHR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CDHR3_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | -5bp_to_ENST00000317716_5end |
EntrezGene: | CDHR3 |
HGNC: | 26308 |
UniProt: | Q6ZTQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.61e-34 | 2 |
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
brainstem | 2.74e-12 | 6 |
trachea | 8.16e-11 | 7 |
respiratory airway | 8.16e-11 | 7 |
thoracic cavity element | 6.54e-09 | 34 |
thoracic cavity | 6.54e-09 | 34 |
thoracic segment organ | 1.09e-08 | 35 |
respiratory primordium | 4.36e-08 | 38 |
endoderm of foregut | 4.36e-08 | 38 |
segmental subdivision of hindbrain | 8.38e-07 | 12 |
hindbrain | 8.38e-07 | 12 |
presumptive hindbrain | 8.38e-07 | 12 |