FFCP PHASE1:Hg19::chr6:85474219..85474228,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11595 | |||
|TSSclassifier=strong | |||
|UniProt=O95935 | |||
|association_with_transcript=8bp_to_ENST00000369663_5end | |||
|description=CAGE_peak_10_at_TBX18_5end | |||
|id=chr6:85474219..85474228,- | |||
|ontology_enrichment_celltype=CL:0000055!2.36e-17!180;CL:0000057!7.63e-13!75;CL:0002620!3.14e-10!23;CL:0000153!5.84e-07!9;CL:0000447!5.84e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.29e-17;23!CL:0002551;1.08e-10;6!CL:0000746;2.05e-10;3!CL:0000594;8.95e-10;3!CL:0000737;5.13e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.44e-17,23;CL:0002551,1.03e-10,6;CL:0000746,2.31e-10,3;CL:0000513,2.31e-10,3;CL:0000594,5.49e-10,3;CL:0000737,5.60e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000513;2.05e-10;3!UBERON:0010115;5.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000948!1.39e-07!24;UBERON:0005498!1.39e-07!24;UBERON:0004140!1.39e-07!24;UBERON:0009881!1.39e-07!24;UBERON:0004141!1.39e-07!24;UBERON:0003084!1.39e-07!24;UBERON:0007005!1.39e-07!24;UBERON:0004139!1.39e-07!24;UBERON:0004291!1.39e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;5.97e-08;1!UBERON:0002134;5.97e-08;1!UBERON:0007195;5.97e-08;1!UBERON:0002426;5.97e-08;1!UBERON:0003831;5.97e-08;1!UBERON:0003898;5.97e-08;1!UBERON:0004830;5.97e-08;1!UBERON:0005208;5.97e-08;1!UBERON:0003830;5.97e-08;1!UBERON:0005175;5.97e-08;1!UBERON:0001774;5.97e-08;1!UBERON:0004145;5.97e-08;1!UBERON:0005946;5.97e-08;1!UBERON:0001103;5.97e-08;1!UBERON:0005965;5.97e-08;1!UBERON:0002078;5.97e-08;1!UBERON:0002067;2.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.69e-09,41;UBERON:0002426,4.40e-08,1;UBERON:0003831,4.40e-08,1;UBERON:0003898,4.40e-08,1;UBERON:0004830,4.40e-08,1;UBERON:0003830,4.40e-08,1;UBERON:0005175,4.40e-08,1;UBERON:0001774,4.40e-08,1;UBERON:0001103,4.40e-08,1;UBERON:0010084,4.40e-08,1;UBERON:0002199,4.82e-08,46;UBERON:0002416,4.82e-08,46;UBERON:0002363,5.05e-08,1;UBERON:0007645,5.05e-08,1;UBERON:0007647,5.05e-08,1;UBERON:0010115,5.05e-08,1;UBERON:0002134,5.40e-08,1;UBERON:0005208,5.40e-08,1;UBERON:0005946,5.40e-08,1;UBERON:0005965,5.40e-08,1;UBERON:0002078,5.40e-08,1;UBERON:0007195,8.12e-08,1;UBERON:0002329,8.62e-08,71;UBERON:0003059,8.62e-08,71;UBERON:0007282,8.62e-08,71;UBERON:0004290,8.62e-08,71;UBERON:0009618,8.62e-08,71;UBERON:0003077,1.17e-07,72;UBERON:0007285,1.17e-07,72;UBERON:0007524,1.57e-07,73;UBERON:0002067,2.70e-07,9;UBERON:0004016,2.70e-07,9;UBERON:0010083,2.70e-07,9;UBERON:0007503,6.07e-07,78 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,2.72285976512103,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.01210257911091,0.383587685530591,0.722878304769133,0.50133791063589,0.579386075843295,0.795285947051099,0.973269740605272,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.550236083880135,0,0,0,0,0,0,0.976248230192678,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0,1.8672662123986,0,0.326923806226917,0.908144565869588,0,0.468642863667593,0.624320153660641,0,0.747243402759005,1.64408298101271,2.10434827678571,1.12360645361799,0.408308342509787,0,0.516628905878827,0,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0,0,0.453728732640084,1.07633781413317,1.06778694409284,0,0,0,0,0.558350568994769,0.337552664482532,0.0974370051611986,1.26216887122057,0.276149695926898,1.61646056818812,1.06502877754984,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0.577465791044295,1.38895653772983,1.33177906564219,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0.87192013766656,0.4400297149257,0,7.15312891703765,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.977208552881205,0,0,0,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94459580125936,0,0,0,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0.521301686808497,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.577566499444116,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,1.50388342815583,1.74020032697074,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.744316738719335,1.2655176988749,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.921482106297696,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0,1.45329133145522,0.300646838828985,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0.677942222341597,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,1.43574604915363,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.298509605773748,0,0,0,1.0062716070103,0.889811221596536,0.228840068396924,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,2.14441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,0,0.636008701306837,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,1.79024599904647,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.271878931907327,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,2.40513409419076,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p10@TBX18 | |||
}} |
Revision as of 12:52, 22 January 2014
Short description: | p10@TBX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TBX18_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000369663_5end |
EntrezGene: | TBX18 |
HGNC: | 11595 |
UniProt: | O95935 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.44e-17 | 23 |
fibroblast of dermis | 1.03e-10 | 6 |
cardiac muscle cell | 2.31e-10 | 3 |
cardiac muscle myoblast | 2.31e-10 | 3 |
skeletal muscle satellite cell | 5.49e-10 | 3 |
striated muscle cell | 5.60e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.69e-09 | 41 |
chest muscle | 4.40e-08 | 1 |
respiratory system muscle | 4.40e-08 | 1 |
skeletal muscle of trunk | 4.40e-08 | 1 |
respiratory system skeletal muscle | 4.40e-08 | 1 |
thoracic segment muscle | 4.40e-08 | 1 |
chest organ | 4.40e-08 | 1 |
muscle of trunk | 4.40e-08 | 1 |
diaphragm | 4.40e-08 | 1 |
future diaphragm | 4.40e-08 | 1 |
integument | 4.82e-08 | 46 |
integumental system | 4.82e-08 | 46 |
dura mater | 5.05e-08 | 1 |
future meninx | 5.05e-08 | 1 |
ectomeninx | 5.05e-08 | 1 |
future dura mater | 5.05e-08 | 1 |
tricuspid valve | 5.40e-08 | 1 |
right atrium valve | 5.40e-08 | 1 |
outflow tract of atrium | 5.40e-08 | 1 |
outflow part of right atrium | 5.40e-08 | 1 |
right cardiac atrium | 5.40e-08 | 1 |
stroma of bone marrow | 8.12e-08 | 1 |
somite | 8.62e-08 | 71 |
presomitic mesoderm | 8.62e-08 | 71 |
presumptive segmental plate | 8.62e-08 | 71 |
dermomyotome | 8.62e-08 | 71 |
trunk paraxial mesoderm | 8.62e-08 | 71 |
paraxial mesoderm | 1.17e-07 | 72 |
presumptive paraxial mesoderm | 1.17e-07 | 72 |
dense mesenchyme tissue | 1.57e-07 | 73 |
dermis | 2.70e-07 | 9 |
dermatome | 2.70e-07 | 9 |
future dermis | 2.70e-07 | 9 |
epithelial vesicle | 6.07e-07 | 78 |