FFCP PHASE1:Mm9::chr2:109757796..109757813,+: Difference between revisions
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{{FFCP|EntrezGene=107515|HGNC=|UniProt=A2ARI4,A2ARI3,Q8BZR7|association_with_transcript=0bp_to_ENSMUST00000046548,ENSMUST00000111037,NM_172671,uc008lmq.1_5end|description=CAGE_peak_2_at_Lgr4_5end|id=chr2:109757796..109757813,+|ontology_enrichment_celltype=CL:0000066!4.25e-08!25;CL:0002563!3.21e-07!9;CL:0002251!3.21e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,4.56e-08,25;CL:0002563,2.93e-07,9;CL:0002251,2.93e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.20e-16!43;UBERON:0005409!3.54e-14!59;UBERON:0000344!1.26e-09!15;UBERON:0001242!6.55e-09!13;UBERON:0000060!6.55e-09!13;UBERON:0001262!6.55e-09!13;UBERON:0004786!6.55e-09!13;UBERON:0000485!6.77e-08!11;UBERON:0003350!3.21e-07!9;UBERON:0004808!3.21e-07!9;UBERON:0001277!3.21e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.61e-15,31;UBERON:0005409,8.58e-13,47;UBERON:0000344,1.11e-09,15;UBERON:0001242,5.83e-09,13;UBERON:0001262,5.83e-09,13;UBERON:0004786,5.83e-09,13;UBERON:0000485,6.13e-08,11;UBERON:0003350,2.93e-07,9;UBERON:0004808,2.93e-07,9;UBERON:0001277,2.93e-07,9|phase1_expression=10.7299727560212,25.8241801653127,28.6649520815408,29.0365642854557,33.5600139064053,30.8897860317877,19.8570744506197,0,0.140788722151667,0.468129052643987,0.34243593645101,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,6.80346321208558,0,0,13.5993559374396,9.86459908588831,18.9496548157957,26.2764817657036,20.4697671051595,26.6032787238923,41.5849714103886,17.0732493204585,5.08024538767705,3.69038872550742,0,28.0186071158736,20.4468613790946,27.3586937391575,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,0,0.485510353031154,1.51076181570693,1.4192770370732,1.46837401729345,1.56478268869608,1.09012578190223,1.31811709640683,2.13872888981712,1.95980990275508,2.87505128729943,0,0.725362142011344,0,3.60163210450326,6.30373567865265,6.70373719960675,1.82084814773638,1.5869729378161,1.90149421051854,0.338844532069132,7.11435836888911,0,0,0.7104801149461,2.09720077362883,3.45796474789399,0,0.135005938331691,0,3.14216082844184,3.97563373712904,0.61245399607477,0.287536413054709,0,2.20231761998777,4.08599481872601,2.4577045320999,1.45074916503213,1.55528994124096,0.52091337055676,1.95428099300967,5.06486349028512,3.20876320331301,5.00868595305235,4.6982654663704,2.42319279572891,7.34544075331885,5.97015324843606,1.44932244350839,8.60423876981386,0.679971333707751,20.5087212822371,11.0461990966104,10.7526452903361,6.74133216632409,8.52151612890289,4.1565760736459,4.59341446863442,12.5350643601246,17.9657068380045,20.3844191765317,35.5533351576666,1.94841936910093,1.52015919285059,1.01104889002957,16.0999270403875,0.258937883647172,11.7269289861212,4.51061849591953,3.95805121805784,7.14908041493781,11.6056433225519,10.5829836422134,17.9703225601436,8.65182387070309,2.16899035379867,1.76922110389975,7.27950824763341,2.87093973998512,2.90925151881133,5.59175283654366,3.22058876712702,4.39838084308256,16.0937944781413,0.239630249011841,0,0.508280908292259,1.3481157546434,0,0.879580464790051,1.56441888173049,2.55715457330331,2.49345653471472,1.78465389374533,5.29564692021645,4.47865094196335,2.27450482590307,4.62972082950243,12.1012011955314,10.8053989083732,8.82304436046211,7.53524089178575,11.0899493616664,5.50888997224854,9.46387418053261,4.13925393182425,3.01795190105979,5.67318240503458,6.862093842394,6.57587197282724,5.83899223373756,4.179025998266,2.46938563689532,9.55364480728767,0.702213187313235,0,0.568326998791185,6.21377317606506,3.98694301967864,8.10279276574567,5.68187365404505,6.49321964766433,8.33042409591843,4.65067889500816,8.31647544338819,9.80828875884224,5.59503489705834,4.43252153013557,4.86412857275134,8.18719929581861,3.07370161407471,4.56301823785264,2.52347938276953,1.02904612379284,5.94753809370836,10.0491215332147,10.2378360256912,8.82499353069666,12.7578786708872,11.6976444281539,8.89512175379481,8.3699275489526,13.2868137232463,10.8701310117847,11.3100843960121,11.3405189063456,9.55324026883689,13.4822911298133,16.2103537406021,16.7278669533668,5.31070122668629,12.9100819248994,13.5249282807697,14.6628956048626,16.2920089220806,26.5814757384307,19.919509194141,24.6508947125936,26.6897837330337,35.7851775373221,12.7474629647474,3.50374722003798,2.75182593158484,3.14806957338795,3.04290182082754,3.85883455603867,3.8193877767213,3.74004978686054,5.0261920300261,4.66754402419738,1.43768206527355,7.44281895337007,5.61667811606209,7.32478746046624,6.63770430031075,15.4381926836277,0.739012760666419,3.03186258832776,0.977789858652155,1.69745085775188,0.234690248288502,1.34005005953453,0.476087281772027,0.780534591431195,0.315270288212382,1.32878813789265,1.43509291791738,1.63863314715738,0.690739927463582,0.867894351489069,0,0,12.2941068254759,26.4899276452543,1.76605648986571,2.22702204525186,2.78689407140348,5.04941854408746,3.78609863299508,5.0757036758563,5.38558494331997,1.19484398976276,3.34198011123591,2.26461224631066,2.42886421004937,2.92255857911312,1.97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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107515 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ARI4,uniprot:A2ARI3,uniprot:Q8BZR7 | |||
|association_with_transcript=0bp_to_ENSMUST00000046548,ENSMUST00000111037,NM_172671,uc008lmq.1_5end | |||
|cluster_id=chr2:109757796..109757813,+ | |||
|description=CAGE_peak_2_at_Lgr4_5end | |||
|id=chr2:109757796..109757813,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.25e-08!25;CL:0002563!3.21e-07!9;CL:0002251!3.21e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.56e-08,25;CL:0002563,2.93e-07,9;CL:0002251,2.93e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.20e-16!43;UBERON:0005409!3.54e-14!59;UBERON:0000344!1.26e-09!15;UBERON:0001242!6.55e-09!13;UBERON:0000060!6.55e-09!13;UBERON:0001262!6.55e-09!13;UBERON:0004786!6.55e-09!13;UBERON:0000485!6.77e-08!11;UBERON:0003350!3.21e-07!9;UBERON:0004808!3.21e-07!9;UBERON:0001277!3.21e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.61e-15,31;UBERON:0005409,8.58e-13,47;UBERON:0000344,1.11e-09,15;UBERON:0001242,5.83e-09,13;UBERON:0001262,5.83e-09,13;UBERON:0004786,5.83e-09,13;UBERON:0000485,6.13e-08,11;UBERON:0003350,2.93e-07,9;UBERON:0004808,2.93e-07,9;UBERON:0001277,2.93e-07,9 | |||
|phase1_expression=10.7299727560212,25.8241801653127,28.6649520815408,29.0365642854557,33.5600139064053,30.8897860317877,19.8570744506197,0,0.140788722151667,0.468129052643987,0.34243593645101,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,6.80346321208558,0,0,13.5993559374396,9.86459908588831,18.9496548157957,26.2764817657036,20.4697671051595,26.6032787238923,41.5849714103886,17.0732493204585,5.08024538767705,3.69038872550742,0,28.0186071158736,20.4468613790946,27.3586937391575,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,0,0.485510353031154,1.51076181570693,1.4192770370732,1.46837401729345,1.56478268869608,1.09012578190223,1.31811709640683,2.13872888981712,1.95980990275508,2.87505128729943,0,0.725362142011344,0,3.60163210450326,6.30373567865265,6.70373719960675,1.82084814773638,1.5869729378161,1.90149421051854,0.338844532069132,7.11435836888911,0,0,0.7104801149461,2.09720077362883,3.45796474789399,0,0.135005938331691,0,3.14216082844184,3.97563373712904,0.61245399607477,0.287536413054709,0,2.20231761998777,4.08599481872601,2.4577045320999,1.45074916503213,1.55528994124096,0.52091337055676,1.95428099300967,5.06486349028512,3.20876320331301,5.00868595305235,4.6982654663704,2.42319279572891,7.34544075331885,5.97015324843606,1.44932244350839,8.60423876981386,0.679971333707751,20.5087212822371,11.0461990966104,10.7526452903361,6.74133216632409,8.52151612890289,4.1565760736459,4.59341446863442,12.5350643601246,17.9657068380045,20.3844191765317,35.5533351576666,1.94841936910093,1.52015919285059,1.01104889002957,16.0999270403875,0.258937883647172,11.7269289861212,4.51061849591953,3.95805121805784,7.14908041493781,11.6056433225519,10.5829836422134,17.9703225601436,8.65182387070309,2.16899035379867,1.76922110389975,7.27950824763341,2.87093973998512,2.90925151881133,5.59175283654366,3.22058876712702,4.39838084308256,16.0937944781413,0.239630249011841,0,0.508280908292259,1.3481157546434,0,0.879580464790051,1.56441888173049,2.55715457330331,2.49345653471472,1.78465389374533,5.29564692021645,4.47865094196335,2.27450482590307,4.62972082950243,12.1012011955314,10.8053989083732,8.82304436046211,7.53524089178575,11.0899493616664,5.50888997224854,9.46387418053261,4.13925393182425,3.01795190105979,5.67318240503458,6.862093842394,6.57587197282724,5.83899223373756,4.179025998266,2.46938563689532,9.55364480728767,0.702213187313235,0,0.568326998791185,6.21377317606506,3.98694301967864,8.10279276574567,5.68187365404505,6.49321964766433,8.33042409591843,4.65067889500816,8.31647544338819,9.80828875884224,5.59503489705834,4.43252153013557,4.86412857275134,8.18719929581861,3.07370161407471,4.56301823785264,2.52347938276953,1.02904612379284,5.94753809370836,10.0491215332147,10.2378360256912,8.82499353069666,12.7578786708872,11.6976444281539,8.89512175379481,8.3699275489526,13.2868137232463,10.8701310117847,11.3100843960121,11.3405189063456,9.55324026883689,13.4822911298133,16.2103537406021,16.7278669533668,5.31070122668629,12.9100819248994,13.5249282807697,14.6628956048626,16.2920089220806,26.5814757384307,19.919509194141,24.6508947125936,26.6897837330337,35.7851775373221,12.7474629647474,3.50374722003798,2.75182593158484,3.14806957338795,3.04290182082754,3.85883455603867,3.8193877767213,3.74004978686054,5.0261920300261,4.66754402419738,1.43768206527355,7.44281895337007,5.61667811606209,7.32478746046624,6.63770430031075,15.4381926836277,0.739012760666419,3.03186258832776,0.977789858652155,1.69745085775188,0.234690248288502,1.34005005953453,0.476087281772027,0.780534591431195,0.315270288212382,1.32878813789265,1.43509291791738,1.63863314715738,0.690739927463582,0.867894351489069,0,0,12.2941068254759,26.4899276452543,1.76605648986571,2.22702204525186,2.78689407140348,5.04941854408746,3.78609863299508,5.0757036758563,5.38558494331997,1.19484398976276,3.34198011123591,2.26461224631066,2.42886421004937,2.92255857911312,1.97643888973262,6.10510501201433,4.5420827266646,3.5613120733451,5.86393053672874,4.12425307431339,5.30980553359851,5.09839335925461,4.23252979750651,6.41257271170054,3.2483208216885,8.60818414242997,9.30341855405596,9.81541069589265,9.62542921638748,8.21695570633122,7.37930260024991,12.3762651897824,5.10659408630682,12.0640933000978,9.83125996748934,17.361299837559,11.7044554203901,10.3453914209201,9.3792941743209,7.00269382963578,1.40803024838226,4.02480934641258,4.6310963591542,6.43056386471772,5.9741837877485,10.9769523369244,10.7435109602823,8.69946768648825,11.659233465194,2.03967832211561,0.512612642393558,2.88941615148511,1.29636169158798,0.376736914009382,0.136694227721025,0,1.5298058699447,0.69975726161829,0.967399816630967,8.59203556213602,7.27572785236611,10.5726122905961,12.0965981720417,8.57262013659322,8.7345025498471,8.22672512947406,11.323523434371,14.3965768091216,16.7203315546413,5.59205381778233,0.56369293868419,14.353588420222,12.4093867842823,5.63908446197738,6.32883135040882,5.57555214119568,7.04143431874524,5.33837977860195,5.87212328783981,2.17425708743405,2.30424005006292,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| |||
|short_description=p2@Lgr4 | |||
}} |
Revision as of 08:32, 6 August 2015
Short description: | p2@Lgr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lgr4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000046548, ENSMUST00000111037, NM_172671, uc008lmq.1_5end |
EntrezGene: | 107515 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.56e-08 | 25 |
intestinal epithelial cell | 2.93e-07 | 9 |
epithelial cell of alimentary canal | 2.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.61e-15 | 31 |
gastrointestinal system | 8.58e-13 | 47 |
mucosa | 1.11e-09 | 15 |
intestinal mucosa | 5.83e-09 | 13 |
wall of intestine | 5.83e-09 | 13 |
gastrointestinal system mucosa | 5.83e-09 | 13 |
simple columnar epithelium | 6.13e-08 | 11 |
epithelium of mucosa | 2.93e-07 | 9 |
gastrointestinal system epithelium | 2.93e-07 | 9 |
intestinal epithelium | 2.93e-07 | 9 |