FFCP PHASE1:Hg19::chr6:56484773..56484794,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56484773..56484794,- | |||
|id=chr6:56484773..56484794,- | |||
|ontology_enrichment_celltype=CL:0002076!1.17e-09!43;CL:0000066!4.96e-09!254;CL:0000223!2.37e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.40e-25;42!CL:0002623;3.93e-21;3!CL:0002251;1.48e-15;20!CL:0000622;6.74e-13;5!CL:0002368;1.80e-12;13!CL:0000154;7.90e-11;6!CL:0000240;1.84e-10;6!CL:0000311;1.84e-10;6!CL:0000079;1.84e-10;6!CL:0000237;1.84e-10;6!CL:0002231;5.61e-10;3!CL:0002166;1.94e-09;3!CL:0002336;3.67e-08;1!CL:0002261;3.67e-08;1!CL:0002170;3.67e-08;1!CL:0002327;1.54e-07;4!CL:0002159;1.62e-07;14!CL:0000150;2.31e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.43e-32,42;CL:0000223,1.38e-22,58;CL:0002623,4.06e-21,3;CL:0002251,1.44e-15,20;CL:0000622,6.88e-13,5;CL:0000066,1.28e-12,253;CL:0002368,2.08e-12,13;CL:0000154,8.03e-11,6;CL:0000240,1.59e-10,6;CL:0000311,1.59e-10,6;CL:0000079,1.59e-10,6;CL:0000237,1.59e-10,6;CL:0000036,1.59e-10,6;CL:0000357,1.59e-10,6;CL:0000114,1.59e-10,6;CL:0002231,5.25e-10,3;CL:0002166,1.94e-09,3;CL:0002336,3.55e-08,1;CL:0002261,3.55e-08,1;CL:0002170,3.55e-08,1;CL:0002159,1.51e-07,14;CL:0002327,1.54e-07,4;CL:0000150,2.33e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.29e-11;58!CL:0000357;1.84e-10;6!CL:0000114;1.84e-10;6 | |||
|ontology_enrichment_disease=DOID:305!1.48e-10!106;DOID:1749!1.58e-10!14;DOID:0050687!2.26e-09!143;DOID:14566!4.22e-07!239;DOID:162!6.33e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.16e-11;14!DOID:3112;8.23e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.70e-11,14;DOID:3112,8.51e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!9.45e-08!72;UBERON:0004119!2.48e-07!169;UBERON:0000925!2.48e-07!169;UBERON:0006595!2.48e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;7.90e-11;6!UBERON:0003293;7.90e-11;6!UBERON:0003294;7.90e-11;6!UBERON:0010047;7.90e-11;6!UBERON:0003408;7.90e-11;6!UBERON:0000167;7.90e-11;6!UBERON:0000165;8.23e-11;28!UBERON:0000161;1.17e-08;19!UBERON:0000166;1.17e-08;19!UBERON:0001911;1.54e-07;4!UBERON:0003343;1.73e-07;4!UBERON:0004785;1.73e-07;4!UBERON:0001708;2.75e-07;4!UBERON:0008895;2.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,8.03e-11,6;UBERON:0003293,8.03e-11,6;UBERON:0003294,8.03e-11,6;UBERON:0010047,8.03e-11,6;UBERON:0000167,8.03e-11,6;UBERON:0000161,1.17e-10,36;UBERON:0000165,2.24e-10,29;UBERON:0000930,2.24e-10,29;UBERON:0000166,2.60e-10,22;UBERON:0001004,1.03e-08,74;UBERON:0003102,1.06e-08,99;UBERON:0004119,2.27e-08,160;UBERON:0000925,2.27e-08,160;UBERON:0006595,2.27e-08,160;UBERON:0000033,4.72e-08,56;UBERON:0001911,1.54e-07,4;UBERON:0005333,1.54e-07,4;UBERON:0008425,1.54e-07,4;UBERON:0005311,1.54e-07,4;UBERON:0003343,1.70e-07,4;UBERON:0004785,1.70e-07,4;UBERON:0001708,2.75e-07,4;UBERON:0008895,2.75e-07,4;UBERON:0000153,3.89e-07,62;UBERON:0007811,3.89e-07,62 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.37223371266318,0.675105328965065,0,0.757301322732344,0,0,0.710019185033229,0,0.339121184620975,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.64625428112938,0,4.2222168412885,6.85154494173119,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,1.17587489739202,2.97727704209012,3.58234090811393,3.48760726216754,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,3.80962293576241,11.4180426280511,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0,0.650060246036521,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,3.96683796866347,3.45942121257191,3.06270509987002,5.6648357279108,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,1.08890984861323,0,0,0,0,6.20253180558791,0,0,0,0,0,0,0.540031437238115,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.296964680832639,1.53580351049616,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.568967241427498,0,0.236387681767936,0,0,0,0,0.482385754501632,0,0.331737779793674,0.591095237907095,0,0.10893846351899,2.23077990845765,0.153900517007594,0,0,0.269272933229316,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0.234264445725339,0,0.391329237864179,0.728341138602278,0,0,0,0,0,0.103688191397247,0,0,0,0,0,1.94144542218394,0,0.0979923974143777,0.435296032902013,0,0.51595809741485,0,0.146178634172371,0,0.193978032976839,0,0.225980740780532,0,0,0.126621591911757,0.782205530939212,0.0801588202515337,0,0.19980960958213,0.432271251462318,0.229073192331831,0.343189995723929,0,0.49701014226173,0.235694034616795,0.271808412147228,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0.295282444544246,0.0846733320657845,0,0.272406812223151,0.321506296930038,0,0.415440338029185,0.2249738915515,0,0.0607495566580247,0.335434687599266,0,0,0.211200673038813,0.896436696664224,0.383830394638891,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0.226624183040251,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0.414239055347196,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.221858103073705,0,1.10678907948985,0.74988244777264,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0.453692771289717,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0.761610424337591,0.406870733204662,0.181848659202559,0.322231671127465,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0.770479321629213,0,0,0.226705925512272,0,0.489473409012935,0.179088841081487,0,0.219284049578707,0.353378291891762,0.578742114812744,0.337884881306145,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0.699397538597222,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.807378228159255,0,1.37406805901436,0.235939446695481,10.272001517214,0.808679663052368,0,0,0,0.0752103283492573,0.20170506870352,0,0,2.29280684514135,0.295712172434091,0,0.781078098613847,0,0,1.09394961803644,0,0.992422356778588,0,2.55524855279191,0,0.672567444437648,0,0,0,0.230467975111559,0.171488009437418,0.1359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| |||
|short_description=p@chr6:56484773..56484794,- | |||
}} |
Revision as of 12:24, 22 January 2014
Short description: | p@chr6:56484773..56484794, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr6:56484773..56484794, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.43e-32 | 42 |
endodermal cell | 1.38e-22 | 58 |
acinar cell of salivary gland | 4.06e-21 | 3 |
epithelial cell of alimentary canal | 1.44e-15 | 20 |
acinar cell | 6.88e-13 | 5 |
epithelial cell | 1.28e-12 | 253 |
respiratory epithelial cell | 2.08e-12 | 13 |
protein secreting cell | 8.03e-11 | 6 |
stratified squamous epithelial cell | 1.59e-10 | 6 |
keratin accumulating cell | 1.59e-10 | 6 |
stratified epithelial cell | 1.59e-10 | 6 |
keratinizing barrier epithelial cell | 1.59e-10 | 6 |
epithelial fate stem cell | 1.59e-10 | 6 |
stratified epithelial stem cell | 1.59e-10 | 6 |
surface ectodermal cell | 1.59e-10 | 6 |
epithelial cell of prostate | 5.25e-10 | 3 |
epithelial cell of Malassez | 1.94e-09 | 3 |
buccal mucosa cell | 3.55e-08 | 1 |
endothelial cell of viscerocranial mucosa | 3.55e-08 | 1 |
keratinized cell of the oral mucosa | 3.55e-08 | 1 |
general ecto-epithelial cell | 1.51e-07 | 14 |
mammary gland epithelial cell | 1.54e-07 | 4 |
glandular epithelial cell | 2.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 8.03e-11 | 6 |
gland of oral region | 8.03e-11 | 6 |
gland of foregut | 8.03e-11 | 6 |
oral gland | 8.03e-11 | 6 |
oral cavity | 8.03e-11 | 6 |
orifice | 1.17e-10 | 36 |
mouth | 2.24e-10 | 29 |
stomodeum | 2.24e-10 | 29 |
oral opening | 2.60e-10 | 22 |
respiratory system | 1.03e-08 | 74 |
surface structure | 1.06e-08 | 99 |
endoderm-derived structure | 2.27e-08 | 160 |
endoderm | 2.27e-08 | 160 |
presumptive endoderm | 2.27e-08 | 160 |
head | 4.72e-08 | 56 |
mammary gland | 1.54e-07 | 4 |
mammary bud | 1.54e-07 | 4 |
mammary ridge | 1.54e-07 | 4 |
mammary placode | 1.54e-07 | 4 |
mucosa of oral region | 1.70e-07 | 4 |
respiratory system mucosa | 1.70e-07 | 4 |
jaw skeleton | 2.75e-07 | 4 |
splanchnocranium | 2.75e-07 | 4 |
anterior region of body | 3.89e-07 | 62 |
craniocervical region | 3.89e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.70e-11 | 14 |
papillary adenocarcinoma | 8.51e-08 | 1 |