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FFCP PHASE1:Mm9::chr1:65003381..65003392,-: Difference between revisions

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{{FFCP|EntrezGene=241075|HGNC=|UniProt=Q8BM47|association_with_transcript=5bp_to_ENSMUST00000097713,ENSMUST00000139649,NM_001039493,uc007bha.1,uc011wmh.1_5end|description=CAGE_peak_4_at_Plekhm3_5end|id=chr1:65003381..65003392,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.60e-07,6;CL:0000677,2.60e-07,6;CL:0000584,2.60e-07,6;CL:0002476,6.66e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.09e-08!71;UBERON:0003075!3.09e-08!71;UBERON:0007284!3.09e-08!71;UBERON:0003056!4.84e-08!49;UBERON:0004121!1.11e-07!102;UBERON:0000924!1.11e-07!102;UBERON:0006601!1.11e-07!102;UBERON:0000033!2.46e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.88e-18,9;UBERON:0000019,4.88e-18,9;UBERON:0000047,4.88e-18,9;UBERON:0010312,4.88e-18,9;UBERON:0004088,4.88e-18,9;UBERON:0002104,4.88e-18,9;UBERON:0001456,4.88e-18,9;UBERON:0003072,4.88e-18,9;UBERON:0004128,4.88e-18,9;UBERON:0003071,4.88e-18,9;UBERON:0001444,1.68e-14,11;UBERON:0000020,3.56e-13,12;UBERON:0001032,3.56e-13,12;UBERON:0004456,3.56e-13,12;UBERON:0000033,4.72e-12,13;UBERON:0005085,4.72e-12,13|phase1_expression=0.160148847104794,3.14077866875425,2.27499619694768,1.20985684522732,2.00358291978539,0.16787927191189,0.700837921786577,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0,0.333109761815663,0,0,0.788655413395594,0.411343300817216,0.84877930359606,0.17008658030214,0,0,0.47997726838022,0,2.29692785646008,0.430761996159075,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.912392380975631,0.917733760808408,0,0.218025156380447,0.659058548203415,0.58328969722285,0.139986421625363,0,0.671130424230945,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.606949382578793,0.528990979272033,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,0,0,0.857435594504678,0.575072826109418,0,0,0.510749352340751,0.307213066512487,0.659431438650969,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.37863096666592,0.529000920747499,1.44932244350839,0,0.679971333707751,0.539703191637817,0,0,0,0,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,0,1.03575153458869,0.593768556259299,0.693941307064543,0.608930956624282,0.922461989024234,0.301445281105245,1.29347577849275,0.628332956648377,0.988779870937496,0.289198713839823,0,0,0.220841518460394,0,1.86391761218122,0.292780797011547,1.04723353406728,1.78819938646014,0.239630249011841,0,0.127070227073065,0.898743836428936,0.915001205637253,1.00523481690292,0.869121600961382,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,0.124406970610093,0.252722758433675,1.26265113531884,0.520481771850815,1.37941262660084,1.26043490863744,2.26057226753573,2.72145996605311,3.97152532883034,2.62364828767241,2.84573707812917,0.431135985865684,0.189106080167819,0.175951124163949,0,0.278047249225598,1.0447564995665,1.23469281844766,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0,0.402619256281115,0.210289948564127,0.514523061896422,5.28670052774077,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,1.79763881730844,1.29682829924817,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.561086559122548,0.189709611372772,0.442830443938806,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.983179888294428,0.172684981865896,0.578596234326046,10.5553898757491,4.35124547054968,0,0,0.321101179975584,0.468846746368813,0.163934945376675,0.252470927204373,0,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0.963963949265421,0.283880170416537,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0,0,0.363533729477506,0,0,1.05418608574999,0,0.340439605753788,0.540183282093931,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0.304464949114599,0.469343416127421,0.63549621259146,0.441056796109924,0.32977250588296,1.61464426695906,1.02531972377865,1.07435109602823,0.984845398470368,0.582961673259701,0.927126510052548,0.683483523191411,0,0,0.188368457004691,0.27338845544205,0,0.679913719975421,0.419854356970974,0.690999869022119,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.337912250981556,0.352071715937262,0.39061315453185,1.15345278868282,0.483168241652012,0,0,0.405450430580328,0.513554785824136,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0.201932899896295,0.304827226619999,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0.906921534460845,0,0.538283139656854,0,0.19318959403219,0,0,0.428736758158132,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,1.35942722695261,0.51776031175182,0.207574695168353,0.798049746802062,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.448176066834085,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,0,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.25384382367503,0.548783918618318,0,0,0,0.711810108745045,0.788035859004508,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p4@Plekhm3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:241075
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8BM47
|association_with_transcript=5bp_to_ENSMUST00000097713,ENSMUST00000139649,NM_001039493,uc007bha.1,uc011wmh.1_5end
|cluster_id=chr1:65003381..65003392,-
|description=CAGE_peak_4_at_Plekhm3_5end
|id=chr1:65003381..65003392,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,2.60e-07,6;CL:0000677,2.60e-07,6;CL:0000584,2.60e-07,6;CL:0002476,6.66e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.09e-08!71;UBERON:0003075!3.09e-08!71;UBERON:0007284!3.09e-08!71;UBERON:0003056!4.84e-08!49;UBERON:0004121!1.11e-07!102;UBERON:0000924!1.11e-07!102;UBERON:0006601!1.11e-07!102;UBERON:0000033!2.46e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.88e-18,9;UBERON:0000019,4.88e-18,9;UBERON:0000047,4.88e-18,9;UBERON:0010312,4.88e-18,9;UBERON:0004088,4.88e-18,9;UBERON:0002104,4.88e-18,9;UBERON:0001456,4.88e-18,9;UBERON:0003072,4.88e-18,9;UBERON:0004128,4.88e-18,9;UBERON:0003071,4.88e-18,9;UBERON:0001444,1.68e-14,11;UBERON:0000020,3.56e-13,12;UBERON:0001032,3.56e-13,12;UBERON:0004456,3.56e-13,12;UBERON:0000033,4.72e-12,13;UBERON:0005085,4.72e-12,13
|phase1_expression=0.160148847104794,3.14077866875425,2.27499619694768,1.20985684522732,2.00358291978539,0.16787927191189,0.700837921786577,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0,0.333109761815663,0,0,0.788655413395594,0.411343300817216,0.84877930359606,0.17008658030214,0,0,0.47997726838022,0,2.29692785646008,0.430761996159075,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.912392380975631,0.917733760808408,0,0.218025156380447,0.659058548203415,0.58328969722285,0.139986421625363,0,0.671130424230945,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.606949382578793,0.528990979272033,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,0,0,0.857435594504678,0.575072826109418,0,0,0.510749352340751,0.307213066512487,0.659431438650969,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.37863096666592,0.529000920747499,1.44932244350839,0,0.679971333707751,0.539703191637817,0,0,0,0,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0,0,1.03575153458869,0.593768556259299,0.693941307064543,0.608930956624282,0.922461989024234,0.301445281105245,1.29347577849275,0.628332956648377,0.988779870937496,0.289198713839823,0,0,0.220841518460394,0,1.86391761218122,0.292780797011547,1.04723353406728,1.78819938646014,0.239630249011841,0,0.127070227073065,0.898743836428936,0.915001205637253,1.00523481690292,0.869121600961382,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,0.124406970610093,0.252722758433675,1.26265113531884,0.520481771850815,1.37941262660084,1.26043490863744,2.26057226753573,2.72145996605311,3.97152532883034,2.62364828767241,2.84573707812917,0.431135985865684,0.189106080167819,0.175951124163949,0,0.278047249225598,1.0447564995665,1.23469281844766,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0,0.402619256281115,0.210289948564127,0.514523061896422,5.28670052774077,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,1.79763881730844,1.29682829924817,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.561086559122548,0.189709611372772,0.442830443938806,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.983179888294428,0.172684981865896,0.578596234326046,10.5553898757491,4.35124547054968,0,0,0.321101179975584,0.468846746368813,0.163934945376675,0.252470927204373,0,0.780877488593277,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0.963963949265421,0.283880170416537,0.178065603667255,0.325773918707152,0.494910368917606,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0,0,0.363533729477506,0,0,1.05418608574999,0,0.340439605753788,0.540183282093931,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0.304464949114599,0.469343416127421,0.63549621259146,0.441056796109924,0.32977250588296,1.61464426695906,1.02531972377865,1.07435109602823,0.984845398470368,0.582961673259701,0.927126510052548,0.683483523191411,0,0,0.188368457004691,0.27338845544205,0,0.679913719975421,0.419854356970974,0.690999869022119,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.337912250981556,0.352071715937262,0.39061315453185,1.15345278868282,0.483168241652012,0,0,0.405450430580328,0.513554785824136,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0.201932899896295,0.304827226619999,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0.906921534460845,0,0.538283139656854,0,0.19318959403219,0,0,0.428736758158132,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,1.35942722695261,0.51776031175182,0.207574695168353,0.798049746802062,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.448176066834085,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,0,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.25384382367503,0.548783918618318,0,0,0,0.711810108745045,0.788035859004508,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p4@Plekhm3
}}

Revision as of 21:10, 5 August 2015

Short description:p4@Plekhm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Plekhm3_5end
Coexpression cluster:NA
Association with transcript: 5bp_to_ENSMUST00000097713, ENSMUST00000139649, NM_001039493, uc007bha.1, uc011wmh.1_5end
EntrezGene:241075
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Plekhm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell2.60e-076
gut absorptive cell2.60e-076
enterocyte2.60e-076
bone marrow macrophage6.66e-072

Uber anatomy
Ontology termp-valuen
eye4.88e-189
camera-type eye4.88e-189
simple eye4.88e-189
immature eye4.88e-189
ocular region4.88e-189
visual system4.88e-189
face4.88e-189
optic cup4.88e-189
optic vesicle4.88e-189
eye primordium4.88e-189
subdivision of head1.68e-1411
sense organ3.56e-1312
sensory system3.56e-1312
entire sense organ system3.56e-1312
head4.72e-1213
ectodermal placode4.72e-1213
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