FFCP PHASE1:Mm9::chr1:182129687..182129717,-: Difference between revisions
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{{FFCP|EntrezGene=67426|HGNC=|MCL_coexpression_id=18|UniProt=E0CYT4|association_with_transcript=15bp_to_ENSMUST00000161743_5end|description=CAGE_peak_4_at_Adck3_5end|id=chr1:182129687..182129717,-|ontology_enrichment_celltype=CL:0000553!5.67e-10!6;CL:0000556!5.67e-10!6;CL:0002031!2.79e-08!25;CL:0000988!1.42e-07!32;CL:0002032!1.42e-07!32;CL:0000037!1.42e-07!32;CL:0000566!1.42e-07!32;CL:0000837!1.42e-07!32|ontology_enrichment_celltype_v019_2=CL:0000553,1.64e-26,6;CL:0000556,1.64e-26,6;CL:0000050,1.58e-17,9;CL:0002027,1.08e-13,3;CL:0002006,1.08e-13,3;CL:0002024,1.08e-13,3;CL:0002031,5.38e-13,25;CL:0000988,4.29e-12,32;CL:0002032,4.29e-12,32;CL:0000037,4.29e-12,32;CL:0000837,4.29e-12,32;CL:0000839,5.57e-12,13;CL:0000049,1.29e-10,19;CL:0000763,1.24e-09,16;CL:0002320,6.24e-08,46;CL:0000134,6.24e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.63e-12!48;UBERON:0002390!3.45e-09!45;UBERON:0003061!3.45e-09!45|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.95e-13,3;UBERON:0002193,3.04e-11,48;UBERON:0002405,3.04e-11,48;UBERON:0002371,1.24e-09,16;UBERON:0001962,2.94e-09,2;UBERON:0001961,2.94e-09,2;UBERON:0001744,2.94e-09,2;UBERON:0002384,6.24e-08,46;UBERON:0002106,3.85e-07,6;UBERON:0004457,3.85e-07,6;UBERON:0000042,3.85e-07,6;UBERON:0004854,3.85e-07,6;UBERON:0009034,3.85e-07,6;UBERON:0002095,3.85e-07,6;UBERON:0004782,3.85e-07,6;UBERON:0003281,3.85e-07,6;UBERON:0009664,3.85e-07,6;UBERON:0002296,3.85e-07,6;UBERON:0005602,3.85e-07,6;UBERON:0001179,3.85e-07,6;UBERON:0006293,3.85e-07,6;UBERON:0003887,5.16e-07,10;UBERON:0001474,7.44e-07,22;UBERON:0004765,7.44e-07,22;UBERON:0001434,7.44e-07,22|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.84473233291,0.234064526321993,0,0,0.171200729931206,0.174840804837995,4.66353666541928,3.84703008040669,2.79824751251259,32.8080651972567,28.7940310572051,24.6145998042858,0.0850432901510698,0.297872853602656,0,2.55987876469451,2.06468352960453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,50.3347818173209,1.45072428402269,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,22.5275958773039,0,0,0,0,0,0,0,0,0.289198713839823,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0,1.1981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.491589944147214,1.20879487306127,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,0,4.44264290074417,0,0.185194527369712,0.753473828018764,2.87057878214153,4.80434163733698,2.37969801991397,2.6590775941495,0.967399816630967,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0.295379054349154,0.201932899896295,0,0,0.38983152295901,0,0.116876902181569,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p4@Adck3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67426 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CYT4 | |||
|association_with_transcript=15bp_to_ENSMUST00000161743_5end | |||
|cluster_id=chr1:182129687..182129717,- | |||
|description=CAGE_peak_4_at_Adck3_5end | |||
|id=chr1:182129687..182129717,- | |||
|ontology_enrichment_celltype=CL:0000553!5.67e-10!6;CL:0000556!5.67e-10!6;CL:0002031!2.79e-08!25;CL:0000988!1.42e-07!32;CL:0002032!1.42e-07!32;CL:0000037!1.42e-07!32;CL:0000566!1.42e-07!32;CL:0000837!1.42e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.64e-26,6;CL:0000556,1.64e-26,6;CL:0000050,1.58e-17,9;CL:0002027,1.08e-13,3;CL:0002006,1.08e-13,3;CL:0002024,1.08e-13,3;CL:0002031,5.38e-13,25;CL:0000988,4.29e-12,32;CL:0002032,4.29e-12,32;CL:0000037,4.29e-12,32;CL:0000837,4.29e-12,32;CL:0000839,5.57e-12,13;CL:0000049,1.29e-10,19;CL:0000763,1.24e-09,16;CL:0002320,6.24e-08,46;CL:0000134,6.24e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.63e-12!48;UBERON:0002390!3.45e-09!45;UBERON:0003061!3.45e-09!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.95e-13,3;UBERON:0002193,3.04e-11,48;UBERON:0002405,3.04e-11,48;UBERON:0002371,1.24e-09,16;UBERON:0001962,2.94e-09,2;UBERON:0001961,2.94e-09,2;UBERON:0001744,2.94e-09,2;UBERON:0002384,6.24e-08,46;UBERON:0002106,3.85e-07,6;UBERON:0004457,3.85e-07,6;UBERON:0000042,3.85e-07,6;UBERON:0004854,3.85e-07,6;UBERON:0009034,3.85e-07,6;UBERON:0002095,3.85e-07,6;UBERON:0004782,3.85e-07,6;UBERON:0003281,3.85e-07,6;UBERON:0009664,3.85e-07,6;UBERON:0002296,3.85e-07,6;UBERON:0005602,3.85e-07,6;UBERON:0001179,3.85e-07,6;UBERON:0006293,3.85e-07,6;UBERON:0003887,5.16e-07,10;UBERON:0001474,7.44e-07,22;UBERON:0004765,7.44e-07,22;UBERON:0001434,7.44e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.84473233291,0.234064526321993,0,0,0.171200729931206,0.174840804837995,4.66353666541928,3.84703008040669,2.79824751251259,32.8080651972567,28.7940310572051,24.6145998042858,0.0850432901510698,0.297872853602656,0,2.55987876469451,2.06468352960453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,50.3347818173209,1.45072428402269,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,22.5275958773039,0,0,0,0,0,0,0,0,0.289198713839823,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0,1.1981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.491589944147214,1.20879487306127,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,0,4.44264290074417,0,0.185194527369712,0.753473828018764,2.87057878214153,4.80434163733698,2.37969801991397,2.6590775941495,0.967399816630967,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0.295379054349154,0.201932899896295,0,0,0.38983152295901,0,0.116876902181569,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p4@Adck3 | |||
}} |
Revision as of 09:50, 5 August 2015
Short description: | p4@Adck3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Adck3_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 15bp_to_ENSMUST00000161743_5end |
EntrezGene: | 67426 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.64e-26 | 6 |
megakaryocyte | 1.64e-26 | 6 |
megakaryocyte-erythroid progenitor cell | 1.58e-17 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.08e-13 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.08e-13 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.08e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 5.38e-13 | 25 |
hematopoietic cell | 4.29e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.29e-12 | 32 |
hematopoietic stem cell | 4.29e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.29e-12 | 32 |
myeloid lineage restricted progenitor cell | 5.57e-12 | 13 |
common myeloid progenitor | 1.29e-10 | 19 |
myeloid cell | 1.24e-09 | 16 |
connective tissue cell | 6.24e-08 | 46 |
mesenchymal cell | 6.24e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.95e-13 | 3 |
hemolymphoid system | 3.04e-11 | 48 |
immune system | 3.04e-11 | 48 |
bone marrow | 1.24e-09 | 16 |
gut-associated lymphoid tissue | 2.94e-09 | 2 |
mucosa-associated lymphoid tissue | 2.94e-09 | 2 |
lymphoid tissue | 2.94e-09 | 2 |
connective tissue | 6.24e-08 | 46 |
spleen | 3.85e-07 | 6 |
cavity lining | 3.85e-07 | 6 |
serous membrane | 3.85e-07 | 6 |
gastrointestinal system mesentery | 3.85e-07 | 6 |
stomach region | 3.85e-07 | 6 |
mesentery | 3.85e-07 | 6 |
gastrointestinal system serosa | 3.85e-07 | 6 |
mesentery of stomach | 3.85e-07 | 6 |
gut mesentery | 3.85e-07 | 6 |
dorsal mesentery | 3.85e-07 | 6 |
dorsal mesogastrium | 3.85e-07 | 6 |
peritoneal cavity | 3.85e-07 | 6 |
spleen primordium | 3.85e-07 | 6 |
intraembryonic coelom | 5.16e-07 | 10 |
bone element | 7.44e-07 | 22 |
skeletal element | 7.44e-07 | 22 |
skeletal system | 7.44e-07 | 22 |