FFCP PHASE1:Hg19::chr6:18264659..18264671,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2768 | |||
|TSSclassifier=strong | |||
|UniProt=B4DFG0 | |||
|association_with_transcript=94bp_to_ENST00000505224_5end | |||
|description=CAGE_peak_6_at_DEK_5end | |||
|id=chr6:18264659..18264671,- | |||
|ontology_enrichment_celltype=CL:0000037!2.38e-15!172;CL:0000566!2.38e-15!172;CL:0002032!7.93e-15!165;CL:0000837!7.93e-15!165;CL:0002087!1.48e-14!119;CL:0000738!2.10e-14!140;CL:0000988!2.35e-14!182;CL:0000860!5.40e-14!45;CL:0002031!1.11e-13!124;CL:0002009!9.19e-13!65;CL:0002057!1.10e-12!42;CL:0000557!2.96e-12!71;CL:0002194!4.94e-12!63;CL:0000576!4.94e-12!63;CL:0000040!4.94e-12!63;CL:0000559!4.94e-12!63;CL:0000763!8.30e-12!112;CL:0000049!8.30e-12!112;CL:0000839!1.75e-10!70;CL:0000766!1.80e-10!76;CL:0000219!9.97e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-11;33!CL:0002057;1.48e-11;33!CL:0000473;4.07e-09;39!CL:0000234;4.07e-09;39!CL:0000576;1.25e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.02e-16,168;CL:0000738,2.01e-15,136;CL:0002032,2.07e-15,161;CL:0000837,2.07e-15,161;CL:0000988,2.53e-15,177;CL:0002087,3.18e-15,115;CL:0002031,5.05e-14,120;CL:0000860,1.18e-13,42;CL:0002057,1.18e-13,42;CL:0002009,4.03e-13,61;CL:0000473,9.06e-13,48;CL:0000234,9.06e-13,48;CL:0000557,2.25e-12,67;CL:0002194,2.98e-12,59;CL:0000576,2.98e-12,59;CL:0000040,2.98e-12,59;CL:0000559,2.98e-12,59;CL:0000763,5.51e-12,108;CL:0000049,5.51e-12,108;CL:0000766,7.15e-11,72;CL:0000839,3.84e-10,66;CL:0000219,1.11e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.56e-09;42 | |||
|ontology_enrichment_disease=DOID:162!1.13e-14!235;DOID:14566!5.19e-14!239;DOID:0050687!3.40e-10!143;DOID:305!8.86e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.40e-16,235;DOID:14566,3.32e-16,239;DOID:0050687,1.15e-10,143;DOID:305,5.31e-10,106;DOID:0050686,5.66e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001474!3.81e-11!86;UBERON:0002371!6.02e-10!80;UBERON:0002390!6.19e-10!102;UBERON:0003061!6.19e-10!102;UBERON:0004765!8.11e-10!101;UBERON:0001434!8.11e-10!101;UBERON:0002193!4.42e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.63e-07;9!UBERON:0001557;1.63e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.37e-12,82;UBERON:0002390,5.52e-11,98;UBERON:0003061,5.52e-11,98;UBERON:0002371,8.59e-11,76;UBERON:0004765,1.53e-09,90;UBERON:0001434,4.52e-09,100;UBERON:0002193,3.90e-08,108;UBERON:0002405,6.12e-08,93;UBERON:0001737,1.75e-07,9 | |||
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| |||
|short_description=p6@DEK | |||
}} |
Revision as of 10:19, 22 January 2014
Short description: | p6@DEK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DEK_5end |
Coexpression cluster: | NA |
Association with transcript: | 94bp_to_ENST00000505224_5end |
EntrezGene: | DEK |
HGNC: | 2768 |
UniProt: | B4DFG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.02e-16 | 168 |
leukocyte | 2.01e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.07e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-15 | 161 |
hematopoietic cell | 2.53e-15 | 177 |
nongranular leukocyte | 3.18e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 5.05e-14 | 120 |
classical monocyte | 1.18e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-13 | 42 |
macrophage dendritic cell progenitor | 4.03e-13 | 61 |
defensive cell | 9.06e-13 | 48 |
phagocyte | 9.06e-13 | 48 |
granulocyte monocyte progenitor cell | 2.25e-12 | 67 |
monopoietic cell | 2.98e-12 | 59 |
monocyte | 2.98e-12 | 59 |
monoblast | 2.98e-12 | 59 |
promonocyte | 2.98e-12 | 59 |
myeloid cell | 5.51e-12 | 108 |
common myeloid progenitor | 5.51e-12 | 108 |
myeloid leukocyte | 7.15e-11 | 72 |
myeloid lineage restricted progenitor cell | 3.84e-10 | 66 |
motile cell | 1.11e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.37e-12 | 82 |
hematopoietic system | 5.52e-11 | 98 |
blood island | 5.52e-11 | 98 |
bone marrow | 8.59e-11 | 76 |
skeletal element | 1.53e-09 | 90 |
skeletal system | 4.52e-09 | 100 |
hemolymphoid system | 3.90e-08 | 108 |
immune system | 6.12e-08 | 93 |
larynx | 1.75e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.40e-16 | 235 |
disease of cellular proliferation | 3.32e-16 | 239 |
cell type cancer | 1.15e-10 | 143 |
carcinoma | 5.31e-10 | 106 |
organ system cancer | 5.66e-07 | 137 |