FFCP PHASE1:Mm9::chr1:134603881..134603894,-: Difference between revisions
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{{FFCP|EntrezGene=269116|HGNC=|MCL_coexpression_id=293|UniProt=E9Q171,Q6P6Q1,Q6ZQ54|association_with_transcript=8bp_to_ENSMUST00000043189,NM_001160318,uc007cpd.2_5end|description=CAGE_peak_3_at_Nfasc_5end|id=chr1:134603881..134603894,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.90e-08,23;CL:0000337,1.90e-08,23;CL:0002319,1.40e-07,43;CL:0002610,2.44e-07,3;CL:0000221,2.45e-07,44;CL:0000133,2.45e-07,44;CL:0002614,3.47e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.72e-21!102;UBERON:0000924!5.72e-21!102;UBERON:0006601!5.72e-21!102;UBERON:0000033!2.40e-20!63;UBERON:0000073!1.11e-19!75;UBERON:0001016!1.11e-19!75;UBERON:0001049!8.05e-19!52;UBERON:0005068!8.05e-19!52;UBERON:0006241!8.05e-19!52;UBERON:0007135!8.05e-19!52;UBERON:0002346!1.12e-18!71;UBERON:0003075!1.12e-18!71;UBERON:0007284!1.12e-18!71;UBERON:0001017!1.03e-17!73;UBERON:0005743!1.03e-17!73;UBERON:0000955!1.26e-17!50;UBERON:0006238!1.26e-17!50;UBERON:0002616!1.06e-16!49;UBERON:0002020!4.67e-16!34;UBERON:0002021!4.61e-14!10;UBERON:0000411!4.61e-14!10;UBERON:0001950!4.61e-14!10;UBERON:0003056!6.28e-13!49;UBERON:0007811!4.15e-12!86;UBERON:0002791!5.35e-12!29;UBERON:0003528!5.35e-12!29;UBERON:0001893!5.35e-12!29;UBERON:0000153!5.38e-11!94;UBERON:0003080!5.86e-11!40;UBERON:0002619!3.70e-10!17;UBERON:0002780!4.03e-10!39;UBERON:0001890!4.03e-10!39;UBERON:0006240!4.03e-10!39;UBERON:0003076!1.23e-09!12;UBERON:0003057!1.23e-09!12;UBERON:0000956!4.66e-09!21;UBERON:0001869!4.66e-09!21;UBERON:0000203!4.66e-09!21;UBERON:0002298!5.75e-09!6;UBERON:0002240!3.87e-07!6;UBERON:0005174!3.87e-07!6;UBERON:0001137!3.87e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.94e-33,75;UBERON:0000073,1.32e-32,54;UBERON:0001017,5.63e-30,73;UBERON:0001049,2.15e-29,52;UBERON:0005068,2.15e-29,52;UBERON:0006241,2.15e-29,52;UBERON:0007135,2.15e-29,52;UBERON:0004121,1.80e-26,95;UBERON:0000924,1.80e-26,95;UBERON:0006601,1.80e-26,95;UBERON:0002346,1.17e-24,64;UBERON:0003075,1.17e-24,64;UBERON:0007284,1.17e-24,64;UBERON:0002020,5.61e-23,34;UBERON:0000955,1.59e-22,47;UBERON:0006238,1.59e-22,47;UBERON:0002021,1.43e-21,10;UBERON:0000411,1.43e-21,10;UBERON:0001950,1.43e-21,10;UBERON:0002616,3.94e-21,46;UBERON:0010371,8.82e-21,73;UBERON:0003528,1.86e-16,29;UBERON:0002791,1.86e-16,29;UBERON:0001893,1.86e-16,29;UBERON:0003080,2.71e-16,40;UBERON:0003076,3.10e-15,12;UBERON:0003057,3.10e-15,12;UBERON:0010314,4.32e-15,92;UBERON:0002780,5.80e-15,39;UBERON:0001890,5.80e-15,39;UBERON:0006240,5.80e-15,39;UBERON:0002619,2.79e-14,17;UBERON:0003056,4.08e-14,49;UBERON:0000956,3.23e-13,21;UBERON:0001869,3.23e-13,21;UBERON:0000203,3.23e-13,21;UBERON:0002240,8.68e-11,6;UBERON:0005174,8.68e-11,6;UBERON:0001137,8.68e-11,6;UBERON:0000025,7.72e-10,114;UBERON:0002950,5.61e-09,4;UBERON:0001891,5.61e-09,4;UBERON:0009616,5.61e-09,4;UBERON:0010286,5.61e-09,4;UBERON:0004111,9.01e-09,122;UBERON:0001948,1.27e-08,5;UBERON:0002315,1.27e-08,5;UBERON:0011216,4.09e-08,194;UBERON:0004684,2.44e-07,3;UBERON:0002275,2.44e-07,3;UBERON:0002038,3.47e-07,3;UBERON:0009663,3.47e-07,3;UBERON:0009661,3.47e-07,3;UBERON:0000125,3.47e-07,3;UBERON:0002308,3.47e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39680088414724,7.30014780110954,0,0,0,39.9911378165325,35.7807036341614,0,0,0,4.40463523997555,7.91661496128164,6.45147439676223,0,0,0,6.70039197603314,6.19038871034848,5.65353516774197,7.95497180778903,10.3931326983345,0,7.04253597998612,7.02815508993105,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,1.46390398505774,6.49284791121711,0,0,0,0,4.49371918214468,6.8625090422794,0.251308704225729,3.82413504423008,12.5300574091862,7.68815764870372,22.5515355664183,0,0,0,0,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.187403449119458,7.76110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,7.70642831941401,28.0135930955366,0,0.504941854408746,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,12.0526446306831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,9.03602948187307,13.3494318587081,16.0410743763031,12.2015759464018,6.85082519770642,8.3093328712867,6.07520250208625,2.2516060161211,2.71885445390523,3.62432218226274,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,1.54413993383661,3.2461496986859|short_description=p3@Nfasc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269116 | |||
|HGNC= | |||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q171,uniprot:Q6P6Q1,uniprot:Q6ZQ54 | |||
|association_with_transcript=8bp_to_ENSMUST00000043189,NM_001160318,uc007cpd.2_5end | |||
|cluster_id=chr1:134603881..134603894,- | |||
|description=CAGE_peak_3_at_Nfasc_5end | |||
|id=chr1:134603881..134603894,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.90e-08,23;CL:0000337,1.90e-08,23;CL:0002319,1.40e-07,43;CL:0002610,2.44e-07,3;CL:0000221,2.45e-07,44;CL:0000133,2.45e-07,44;CL:0002614,3.47e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.72e-21!102;UBERON:0000924!5.72e-21!102;UBERON:0006601!5.72e-21!102;UBERON:0000033!2.40e-20!63;UBERON:0000073!1.11e-19!75;UBERON:0001016!1.11e-19!75;UBERON:0001049!8.05e-19!52;UBERON:0005068!8.05e-19!52;UBERON:0006241!8.05e-19!52;UBERON:0007135!8.05e-19!52;UBERON:0002346!1.12e-18!71;UBERON:0003075!1.12e-18!71;UBERON:0007284!1.12e-18!71;UBERON:0001017!1.03e-17!73;UBERON:0005743!1.03e-17!73;UBERON:0000955!1.26e-17!50;UBERON:0006238!1.26e-17!50;UBERON:0002616!1.06e-16!49;UBERON:0002020!4.67e-16!34;UBERON:0002021!4.61e-14!10;UBERON:0000411!4.61e-14!10;UBERON:0001950!4.61e-14!10;UBERON:0003056!6.28e-13!49;UBERON:0007811!4.15e-12!86;UBERON:0002791!5.35e-12!29;UBERON:0003528!5.35e-12!29;UBERON:0001893!5.35e-12!29;UBERON:0000153!5.38e-11!94;UBERON:0003080!5.86e-11!40;UBERON:0002619!3.70e-10!17;UBERON:0002780!4.03e-10!39;UBERON:0001890!4.03e-10!39;UBERON:0006240!4.03e-10!39;UBERON:0003076!1.23e-09!12;UBERON:0003057!1.23e-09!12;UBERON:0000956!4.66e-09!21;UBERON:0001869!4.66e-09!21;UBERON:0000203!4.66e-09!21;UBERON:0002298!5.75e-09!6;UBERON:0002240!3.87e-07!6;UBERON:0005174!3.87e-07!6;UBERON:0001137!3.87e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.94e-33,75;UBERON:0000073,1.32e-32,54;UBERON:0001017,5.63e-30,73;UBERON:0001049,2.15e-29,52;UBERON:0005068,2.15e-29,52;UBERON:0006241,2.15e-29,52;UBERON:0007135,2.15e-29,52;UBERON:0004121,1.80e-26,95;UBERON:0000924,1.80e-26,95;UBERON:0006601,1.80e-26,95;UBERON:0002346,1.17e-24,64;UBERON:0003075,1.17e-24,64;UBERON:0007284,1.17e-24,64;UBERON:0002020,5.61e-23,34;UBERON:0000955,1.59e-22,47;UBERON:0006238,1.59e-22,47;UBERON:0002021,1.43e-21,10;UBERON:0000411,1.43e-21,10;UBERON:0001950,1.43e-21,10;UBERON:0002616,3.94e-21,46;UBERON:0010371,8.82e-21,73;UBERON:0003528,1.86e-16,29;UBERON:0002791,1.86e-16,29;UBERON:0001893,1.86e-16,29;UBERON:0003080,2.71e-16,40;UBERON:0003076,3.10e-15,12;UBERON:0003057,3.10e-15,12;UBERON:0010314,4.32e-15,92;UBERON:0002780,5.80e-15,39;UBERON:0001890,5.80e-15,39;UBERON:0006240,5.80e-15,39;UBERON:0002619,2.79e-14,17;UBERON:0003056,4.08e-14,49;UBERON:0000956,3.23e-13,21;UBERON:0001869,3.23e-13,21;UBERON:0000203,3.23e-13,21;UBERON:0002240,8.68e-11,6;UBERON:0005174,8.68e-11,6;UBERON:0001137,8.68e-11,6;UBERON:0000025,7.72e-10,114;UBERON:0002950,5.61e-09,4;UBERON:0001891,5.61e-09,4;UBERON:0009616,5.61e-09,4;UBERON:0010286,5.61e-09,4;UBERON:0004111,9.01e-09,122;UBERON:0001948,1.27e-08,5;UBERON:0002315,1.27e-08,5;UBERON:0011216,4.09e-08,194;UBERON:0004684,2.44e-07,3;UBERON:0002275,2.44e-07,3;UBERON:0002038,3.47e-07,3;UBERON:0009663,3.47e-07,3;UBERON:0009661,3.47e-07,3;UBERON:0000125,3.47e-07,3;UBERON:0002308,3.47e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39680088414724,7.30014780110954,0,0,0,39.9911378165325,35.7807036341614,0,0,0,4.40463523997555,7.91661496128164,6.45147439676223,0,0,0,6.70039197603314,6.19038871034848,5.65353516774197,7.95497180778903,10.3931326983345,0,7.04253597998612,7.02815508993105,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,1.46390398505774,6.49284791121711,0,0,0,0,4.49371918214468,6.8625090422794,0.251308704225729,3.82413504423008,12.5300574091862,7.68815764870372,22.5515355664183,0,0,0,0,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.187403449119458,7.76110112217047,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,7.70642831941401,28.0135930955366,0,0.504941854408746,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,12.0526446306831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,9.03602948187307,13.3494318587081,16.0410743763031,12.2015759464018,6.85082519770642,8.3093328712867,6.07520250208625,2.2516060161211,2.71885445390523,3.62432218226274,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,1.54413993383661,3.2461496986859 | |||
|short_description=p3@Nfasc | |||
}} |
Revision as of 19:06, 4 August 2015
Short description: | p3@Nfasc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nfasc_5end |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | 8bp_to_ENSMUST00000043189, NM_001160318, uc007cpd.2_5end |
EntrezGene: | 269116 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.90e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.90e-08 | 23 |
neural cell | 1.40e-07 | 43 |
raphe nuclei neuron | 2.44e-07 | 3 |
ectodermal cell | 2.45e-07 | 44 |
neurectodermal cell | 2.45e-07 | 44 |
neuron of the substantia nigra | 3.47e-07 | 3 |