FFCP PHASE1:Hg19::chr6:152011695..152011709,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3467 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T5H8,P03372 | |||
|association_with_transcript=64bp_to_ENST00000404742,ENST00000440973,NM_001122742,uc003qom.3_5end | |||
|description=CAGE_peak_6_at_ESR1_5end | |||
|id=chr6:152011695..152011709,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.45e-13!119;CL:0000945!2.40e-11!24;CL:0000826!2.40e-11!24;CL:0000542!3.48e-11!53;CL:0000051!3.48e-11!53;CL:0002031!5.35e-11!124;CL:0000838!1.01e-10!52;CL:0000738!1.12e-10!140;CL:0000236!6.70e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.99e-13;24!CL:0000236;3.72e-13;13!CL:0000817;3.56e-08;1!CL:1000306;9.12e-08;4!CL:0002547;9.12e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.45e-13,24;CL:0000826,2.45e-13,24;CL:0000236,1.73e-12,14;CL:1000306,1.05e-07,4;CL:0002547,1.05e-07,4;CL:0000838,2.00e-07,52;CL:0000542,2.90e-07,53;CL:0000051,2.90e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;5.40e-17;4!DOID:1612;5.40e-17;4!DOID:3371;9.77e-09;1!DOID:4549;9.77e-09;1!DOID:5861;9.77e-09;1!DOID:6496;9.77e-09;1!DOID:0060060;3.56e-08;1!DOID:4960;3.56e-08;1!DOID:0060061;3.56e-08;1!DOID:0070004;3.56e-08;1!DOID:8691;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.43e-17,4;DOID:1612,5.43e-17,4;DOID:3371,9.79e-09,1;DOID:4549,9.79e-09,1;DOID:5861,9.79e-09,1;DOID:6496,9.79e-09,1;DOID:0060060,2.02e-08,1;DOID:0060061,2.02e-08,1;DOID:8691,2.02e-08,1;DOID:4960,7.16e-08,1;DOID:0070004,7.16e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.26e-08;1!UBERON:0005795;3.56e-08;1!UBERON:0004797;9.12e-08;4!UBERON:0000415;9.12e-08;4!UBERON:0007240;9.12e-08;4!UBERON:0005742;9.12e-08;4!UBERON:0005734;9.12e-08;4!UBERON:0004664;9.12e-08;4!UBERON:0004663;9.12e-08;4!UBERON:0000310;4.46e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.31e-08,1;UBERON:0000415,1.05e-07,4;UBERON:0007240,1.05e-07,4;UBERON:0005742,1.05e-07,4;UBERON:0005734,1.05e-07,4;UBERON:0004664,1.05e-07,4;UBERON:0004663,1.05e-07,4;UBERON:0000310,4.46e-07,10 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.410502947249729,0.550975469195755,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,1.10799081706375,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0.709446689665756,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0.65156653411535,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.570025487482497,0.19891667719909,0,3.51992488922645,0.546138611262131,1.77901850772711,0,0.400395987036012,0.574752439954483,1.32208974556972,1.90810750907073,0,0.587237189370939,0.382273228125229,0,0,0.526768169550154,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0.541607727530031,0,0,0.328875809207352,0,1.15921234294021,0.14828656316206,0.535081656179426,1.04535523804977,0.339928028092699,0,0.68725489096526,2.78321661221453,0.637130828648193,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,1.45990461090791,0,0,0,0.785874452986276,0,0,0,0.522389211897802,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.19168262731897,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,5.15091697256924,0.492434012174795,0.468008530278475,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,1.73123055571734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,5.72941074387513,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,2.23155749661011,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,8.64910041576703,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.458320848023367,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0.496166021811951,1.18566979138767,1.09613338542806,0,0.544017803369474,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.947015026375446,0.251567901752575,0.889811221596536,0,0.151230923763239,0,0,0,0,0.465788870628778,0,0,0,0,0,1.22061219961398,0.545545977607678,0,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,1.79988656269437,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0529445968896,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.91064876540519,0,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0.647428837187895,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0.490296643507811,0,0,0,0,0,0,0,1.19929387109915,0,0,0,0,0.917458566809082,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.852935927603924,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,3.30051899293739,1.22068853494722,0,0.603821380773079,0 | |||
|short_description=p6@ESR1 | |||
}} |
Revision as of 14:39, 22 January 2014
Short description: | p6@ESR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ESR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000404742, ENST00000440973, NM_001122742, uc003qom.3_5end |
EntrezGene: | ESR1 |
HGNC: | 3467 |
UniProt: | Q5T5H8P03372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.45e-13 | 24 |
pro-B cell | 2.45e-13 | 24 |
B cell | 1.73e-12 | 14 |
fibroblast of tunica adventitia of artery | 1.05e-07 | 4 |
fibroblast of the aortic adventitia | 1.05e-07 | 4 |
lymphoid lineage restricted progenitor cell | 2.00e-07 | 52 |
lymphocyte | 2.90e-07 | 53 |
common lymphoid progenitor | 2.90e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.31e-08 | 1 |
artery wall | 1.05e-07 | 4 |
tunica adventitia of artery | 1.05e-07 | 4 |
adventitia | 1.05e-07 | 4 |
tunica adventitia of blood vessel | 1.05e-07 | 4 |
aorta tunica adventitia | 1.05e-07 | 4 |
aorta wall | 1.05e-07 | 4 |
breast | 4.46e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.43e-17 | 4 |
breast cancer | 5.43e-17 | 4 |
chondrosarcoma | 9.79e-09 | 1 |
extraosseous chondrosarcoma | 9.79e-09 | 1 |
myxoid chondrosarcoma | 9.79e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 9.79e-09 | 1 |
non-Hodgkin lymphoma | 2.02e-08 | 1 |
cutaneous T cell lymphoma | 2.02e-08 | 1 |
mycosis fungoides | 2.02e-08 | 1 |
bone marrow cancer | 7.16e-08 | 1 |
myeloma | 7.16e-08 | 1 |