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FFCP PHASE1:Mm9::chr19:8831589..8831616,+: Difference between revisions

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{{FFCP|EntrezGene=53319|HGNC=|MCL_coexpression_id=327|UniProt=Q99JX7|association_with_transcript=0bp_to_ENSMUST00000010241,NM_016813,uc008gmr.1_5end|description=CAGE_peak_2_at_Nxf1_5end|id=chr19:8831589..8831616,+|ontology_enrichment_celltype=CL:0000542!1.50e-08!13;CL:0000051!1.50e-08!13;CL:0000838!4.46e-08!12;CL:0000791!1.64e-07!9;CL:0000789!1.64e-07!9;CL:0002420!1.64e-07!9;CL:0002419!1.64e-07!9;CL:0000790!1.64e-07!9;CL:0000084!1.91e-07!11;CL:0000827!1.91e-07!11;CL:0000624!7.24e-07!8|ontology_enrichment_celltype_v019_2=CL:0000542,1.50e-08,13;CL:0000051,1.50e-08,13;CL:0000838,4.46e-08,12;CL:0000791,1.64e-07,9;CL:0000789,1.64e-07,9;CL:0002420,1.64e-07,9;CL:0002419,1.64e-07,9;CL:0000790,1.64e-07,9;CL:0000084,1.91e-07,11;CL:0000827,1.91e-07,11;CL:0000624,7.24e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!2.17e-08!41;UBERON:0004177!5.83e-08!29;UBERON:0001004!6.95e-08!42;UBERON:0003081!1.21e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.73e-09,43;UBERON:0001048,6.31e-09,134;UBERON:0000065,2.17e-08,41;UBERON:0004177,5.83e-08,29;UBERON:0005057,5.83e-08,29;UBERON:0001004,6.95e-08,42;UBERON:0000077,1.84e-07,35;UBERON:0003081,3.15e-07,87;UBERON:0007811,3.36e-07,36;UBERON:0000926,6.24e-07,120;UBERON:0004120,6.24e-07,120;UBERON:0006603,6.24e-07,120|phase1_expression=33.7914067391115,18.8446720125255,12.2849794635175,19.3577095236371,26.0465779572101,18.9703577260435,23.5948767001481,93.8726561420259,166.975424471877,218.850332111064,84.0680223987229,78.256487974425,96.0436094914064,117.580441253551,29.646768801594,54.8707974626428,54.5658264939954,61.1996600794981,63.483982759457,50.5023685639656,41.6712121740242,34.3546691155063,40.7471671056739,21.2789922315231,17.6645146421721,7.46501553349526,9.47676391549965,17.0222273821852,14.0617330397717,12.3494763582366,12.4169085966971,43.1820857952549,45.5147942812582,15.8481681015439,20.7973166220918,24.1040235769814,25.5211695327961,30.5528090437943,20.3147189576188,30.8879008944541,41.176204162171,29.3709558532132,29.1306211818692,41.7977435678917,39.5370031756107,32.1206816282943,7.04152209913235,10.9012578190223,5.71184075109627,10.6936444490856,12.738764367908,4.31257693094915,72.9854336351153,66.0079549230323,76.6293862044818,17.7509010864803,20.3438742356517,18.0485232297105,37.4285452590256,35.4423956112262,32.3254015788151,6.77689064138264,10.6715375533337,21.1476433561129,19.7773272513395,17.0515227587064,11.085204089181,9.60545763303886,34.8397097356485,42.2568586978192,37.2275181591946,16.5677570954206,20.3199057675484,34.2974237801871,48.3061173931911,29.4150011715207,17.6185409599022,25.2820929408672,25.6522910537927,34.4223210975806,38.9737361746265,39.5894161623138,23.451371916116,26.449842671489,28.1148775909331,19.4454866412621,18.7930618654816,27.4007185363192,29.0031320466095,29.0194790810056,57.1033042742305,25.8127163094416,16.319312008986,12.4131734076698,15.5946340187441,16.5769948226014,23.4542181620026,34.9382161285018,27.5373164879041,26.5004680882755,27.323623436676,19.2489716121477,28.028576367731,0,14.9378818297738,21.2822286999083,13.6491600153991,20.895649988588,80.2707439306232,39.6340511303082,27.0637109755172,22.5304453950985,25.5983201954225,29.9938054699719,28.5740558339763,20.8606541607261,28.9218112249217,32.3902559500602,30.9613693182456,34.779872738693,29.1510804367719,37.8202697445473,22.3670113461747,43.0387771606974,37.4909605196085,20.4365644166873,37.0228734723294,20.9965955847693,32.1487674494854,40.4434726393021,38.4300506367646,38.3245773944236,30.5930803538407,29.6629930503183,32.4149349512914,30.3391161936707,27.4966282395854,35.9536145063169,22.9977710174644,26.3052319858092,45.0216732650955,35.8647282916218,41.5943519850357,44.1565116258645,39.6652790052241,49.0675548690975,38.7925139677277,39.0642089815914,41.1734866501729,49.9240051643043,49.0903636417417,38.7976446396807,50.6045993590588,38.3077383174383,42.8026843728522,32.8406540250514,34.4084461783485,35.5140111818307,30.689657934724,33.9686266958223,36.1170132370888,39.4335914599623,41.1935839918266,37.1884398002593,39.1838466733941,39.7633045523197,34.6072687805509,35.6134294219867,33.899329082177,38.5793540585874,34.0489000092594,29.9709974221931,31.8347667172023,30.0622378023233,38.9036404843635,35.7079004956117,23.7901523748335,21.1560453330835,49.4828741241743,40.1769442318559,37.6292987060513,29.6474781196314,22.0154263406422,28.914295169109,20.404749646414,19.2697777027093,20.1068167040216,21.4872989804443,26.5151158482003,17.0775687644302,30.2593269824572,23.6978115172697,38.1232480915694,33.2463171694311,32.6852433451933,33.6024690944769,31.2263504339877,28.7556861550306,30.1005916711465,34.3931644792473,31.2427468404336,26.4069930792653,25.4949259294948,39.5422900547143,37.5427680666218,44.0729740274313,34.0805003932685,40.517762838406,31.0643539173332,27.6188291952778,26.1037715107807,36.7912293672029,18.6898668485561,30.5155577088173,31.2037673114561,22.7320990152401,19.19552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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:53319
|HGNC=
|MCL_coexpression_id=327
|TSSclassifier=NA
|UniProt=uniprot:Q99JX7
|association_with_transcript=0bp_to_ENSMUST00000010241,NM_016813,uc008gmr.1_5end
|cluster_id=chr19:8831589..8831616,+
|description=CAGE_peak_2_at_Nxf1_5end
|id=chr19:8831589..8831616,+
|ontology_enrichment_celltype=CL:0000542!1.50e-08!13;CL:0000051!1.50e-08!13;CL:0000838!4.46e-08!12;CL:0000791!1.64e-07!9;CL:0000789!1.64e-07!9;CL:0002420!1.64e-07!9;CL:0002419!1.64e-07!9;CL:0000790!1.64e-07!9;CL:0000084!1.91e-07!11;CL:0000827!1.91e-07!11;CL:0000624!7.24e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000542,1.50e-08,13;CL:0000051,1.50e-08,13;CL:0000838,4.46e-08,12;CL:0000791,1.64e-07,9;CL:0000789,1.64e-07,9;CL:0002420,1.64e-07,9;CL:0002419,1.64e-07,9;CL:0000790,1.64e-07,9;CL:0000084,1.91e-07,11;CL:0000827,1.91e-07,11;CL:0000624,7.24e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!2.17e-08!41;UBERON:0004177!5.83e-08!29;UBERON:0001004!6.95e-08!42;UBERON:0003081!1.21e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.73e-09,43;UBERON:0001048,6.31e-09,134;UBERON:0000065,2.17e-08,41;UBERON:0004177,5.83e-08,29;UBERON:0005057,5.83e-08,29;UBERON:0001004,6.95e-08,42;UBERON:0000077,1.84e-07,35;UBERON:0003081,3.15e-07,87;UBERON:0007811,3.36e-07,36;UBERON:0000926,6.24e-07,120;UBERON:0004120,6.24e-07,120;UBERON:0006603,6.24e-07,120
|phase1_expression=33.7914067391115,18.8446720125255,12.2849794635175,19.3577095236371,26.0465779572101,18.9703577260435,23.5948767001481,93.8726561420259,166.975424471877,218.850332111064,84.0680223987229,78.256487974425,96.0436094914064,117.580441253551,29.646768801594,54.8707974626428,54.5658264939954,61.1996600794981,63.483982759457,50.5023685639656,41.6712121740242,34.3546691155063,40.7471671056739,21.2789922315231,17.6645146421721,7.46501553349526,9.47676391549965,17.0222273821852,14.0617330397717,12.3494763582366,12.4169085966971,43.1820857952549,45.5147942812582,15.8481681015439,20.7973166220918,24.1040235769814,25.5211695327961,30.5528090437943,20.3147189576188,30.8879008944541,41.176204162171,29.3709558532132,29.1306211818692,41.7977435678917,39.5370031756107,32.1206816282943,7.04152209913235,10.9012578190223,5.71184075109627,10.6936444490856,12.738764367908,4.31257693094915,72.9854336351153,66.0079549230323,76.6293862044818,17.7509010864803,20.3438742356517,18.0485232297105,37.4285452590256,35.4423956112262,32.3254015788151,6.77689064138264,10.6715375533337,21.1476433561129,19.7773272513395,17.0515227587064,11.085204089181,9.60545763303886,34.8397097356485,42.2568586978192,37.2275181591946,16.5677570954206,20.3199057675484,34.2974237801871,48.3061173931911,29.4150011715207,17.6185409599022,25.2820929408672,25.6522910537927,34.4223210975806,38.9737361746265,39.5894161623138,23.451371916116,26.449842671489,28.1148775909331,19.4454866412621,18.7930618654816,27.4007185363192,29.0031320466095,29.0194790810056,57.1033042742305,25.8127163094416,16.319312008986,12.4131734076698,15.5946340187441,16.5769948226014,23.4542181620026,34.9382161285018,27.5373164879041,26.5004680882755,27.323623436676,19.2489716121477,28.028576367731,0,14.9378818297738,21.2822286999083,13.6491600153991,20.895649988588,80.2707439306232,39.6340511303082,27.0637109755172,22.5304453950985,25.5983201954225,29.9938054699719,28.5740558339763,20.8606541607261,28.9218112249217,32.3902559500602,30.9613693182456,34.779872738693,29.1510804367719,37.8202697445473,22.3670113461747,43.0387771606974,37.4909605196085,20.4365644166873,37.0228734723294,20.9965955847693,32.1487674494854,40.4434726393021,38.4300506367646,38.3245773944236,30.5930803538407,29.6629930503183,32.4149349512914,30.3391161936707,27.4966282395854,35.9536145063169,22.9977710174644,26.3052319858092,45.0216732650955,35.8647282916218,41.5943519850357,44.1565116258645,39.6652790052241,49.0675548690975,38.7925139677277,39.0642089815914,41.1734866501729,49.9240051643043,49.0903636417417,38.7976446396807,50.6045993590588,38.3077383174383,42.8026843728522,32.8406540250514,34.4084461783485,35.5140111818307,30.689657934724,33.9686266958223,36.1170132370888,39.4335914599623,41.1935839918266,37.1884398002593,39.1838466733941,39.7633045523197,34.6072687805509,35.6134294219867,33.899329082177,38.5793540585874,34.0489000092594,29.9709974221931,31.8347667172023,30.0622378023233,38.9036404843635,35.7079004956117,23.7901523748335,21.1560453330835,49.4828741241743,40.1769442318559,37.6292987060513,29.6474781196314,22.0154263406422,28.914295169109,20.404749646414,19.2697777027093,20.1068167040216,21.4872989804443,26.5151158482003,17.0775687644302,30.2593269824572,23.6978115172697,38.1232480915694,33.2463171694311,32.6852433451933,33.6024690944769,31.2263504339877,28.7556861550306,30.1005916711465,34.3931644792473,31.2427468404336,26.4069930792653,25.4949259294948,39.5422900547143,37.5427680666218,44.0729740274313,34.0805003932685,40.517762838406,31.0643539173332,27.6188291952778,26.1037715107807,36.7912293672029,18.6898668485561,30.5155577088173,31.2037673114561,22.7320990152401,19.1955232468446,19.7801843758981,49.3291017744834,36.0033682363921,48.2376330268397,36.1557032701151,42.0095544436419,41.7090581030121,34.992415210244,34.5386556708304,51.2314218345121,43.8500085504574,48.1553401345611,54.5664838003408,44.2073553576693,45.5644534531761,31.6661696272472,20.668415985111,26.0635064700089,30.0771053472158,33.5550733074485,31.5299436933027,19.0164536636943,28.2767438468898,29.6577726251281,27.7211508450613,38.3453647964382,32.7387253194996,35.8705865272655,29.7230357328274,33.5992882390162,30.1023533648651,41.1099289064384,51.4114106274891,40.7368044547731,35.4350551297838,24.59593086239,44.7069033255571,19.9117707509944,27.1914312493579,22.0696196584268,21.3123740124165,22.4429438589387,30.1286444985049,29.4608254211772,25.8108947929029,24.9548164869305,27.8112346983518,13.7044191147498,13.4076206222643,54.1298973148523,40.1536239689822,36.867224878085,27.863814554107,40.2562330367961,28.1822731811271,36.0362355118645,26.7929155220847,26.752574719263,31.1393144169816,22.0528398054962,33.1421368412375,36.3294960065787,38.1780814795227,32.4692775688531,39.7220977383048,27.399198643206,28.740921811629,39.9837861066975,24.9728110235499,41.6687686581851,52.3664310473041,50.9869469399424,45.526856468098,43.3444996484331,48.0033481470147,43.6711917221979,36.2774834845743,37.327647242574,40.0539350239892,31.6455648607878,31.7814209941992,28.6054958507493,29.9398848974302,27.0276800221848,25.9138382564189,29.422598937237,24.853572523477,74.4074679063131,36.4820372347308,28.9552358299921,32.8622508301441,24.7986861077244,38.6909527373882,31.5690971957078,29.5563953595767,42.3631751479872,66.1940491063257,65.6708414267933,66.9943575731738,22.9079493277886,31.3268419352723,40.7951384150276,36.8794993075012,46.2927556640347,47.7175934594276,48.8852334947851,59.0653732196664,50.6775264255749,59.2857968604622,56.2331971868371,56.4763510428734,58.3215741886029,31.9689840897448,26.6383144048878,32.5661299492397,26.0221155364322,41.3425731228888,29.0907836949332,34.2493537379786,34.9420457898877,33.6053309703693,24.2843292325339,27.1591889539234,18.3326564300607,19.7631159695241,24.6629707117431,25.6833925112498,24.9758325085768,33.3237690385923,22.203978040226,21.7459330935764,44.0058353756909,58.2576315165505,35.3418563911058,39.1401814479953,24.9439663527299,20.7743164548516,32.0035288034326,28.2268028417285,31.1291633304061,31.8398486822385,34.2197054851824,33.3868624253355,33.3363766592781,31.5003749831957,32.680781835744,32.8642646985321,30.5934620494418,30.2867476128017,31.3185284610513,36.9469289537337,27.0866709384478,27.1537983423786,26.9432894640473,29.3599761597304,33.2206112866117,31.392019527812,28.7196917410253,31.5683653725411,32.0497708676234,33.1073940278066,28.4724043498018,28.4677954065378,31.5107903240661,33.0015471726108,25.4636726495107,31.4761328201812,34.6218780499204,33.5198844315345,24.484906504812,30.4416158384931,26.6648010963485
|short_description=p2@Nxf1
}}

Revision as of 13:49, 4 August 2015

Short description:p2@Nxf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nxf1_5end
Coexpression cluster:MCL_coexpression_mm9:327
Association with transcript: 0bp_to_ENSMUST00000010241, NM_016813, uc008gmr.1_5end
EntrezGene:53319
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Nxf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G733.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.97
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.59
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E993.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7166.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2218.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E684.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F178.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E496.04
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8117.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A129.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A354.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A554.57
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A261.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A463.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A650.50
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A341.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H234.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I940.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.66
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I217.02
Ileum epithelium, pool1.CNhs13199.10252-104B914.06
Ileum epithelium, pool2.CNhs13232.10253-104C112.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G645.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F624.10
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H120.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H229.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D841.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D939.54
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B332.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A272.99
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I966.01
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A176.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.05
Mouse Granule cells, donor1.CNhs12131.11713-123C337.43
Mouse Granule cells, donor2.CNhs12357.11731-123E335.44
Mouse Granule cells, donor3.CNhs12108.11636-122C732.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C721.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.05
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F542.26
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D937.23
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.32
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D234.30
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F248.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D629.42
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.65
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F438.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D839.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.40
Mouse Schwann, donor1.CNhs12507.11728-123D929.00
Mouse Schwann, donor2.CNhs12573.11746-123F929.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G357.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F725.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C416.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I734.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.50
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.94
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G221.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.90
accessory axillary lymph node, adult.CNhs10475.1063-29H980.27
adrenal gland, adult.CNhs10508.49-24D739.63
adrenal gland, embryo E14.CNhs11038.406-44C527.06
adrenal gland, embryo E16.CNhs11004.1254-43D622.53
adrenal gland, embryo E17.CNhs11043.1263-45I125.60
adrenal gland, embryo E18.CNhs11026.1262-18F529.99
adrenal gland, neonate N00.CNhs11191.1311-23C128.57
adrenal gland, neonate N25.CNhs11223.1377-27I320.86
amnion, adult pregnant day17.5.CNhs10488.583-22A828.92
aorta, adult.CNhs10498.46-23H132.39
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F534.78
bone (os femoris), neonate N16.CNhs11225.1525-43A629.15
bone (os femoris), neonate N20.CNhs11195.1350-25C337.82
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B243.04
cerebellum, neonate N30.CNhs11135.1395-42I237.49
colon, adult.CNhs10468.36-18H720.44
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C737.02
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D432.15
corpora quadrigemina, adult.CNhs10501.16-22A440.44
corpus striatum, adult.CNhs10487.19-21D838.43
corpus striatum, neonate N00.CNhs11226.630-43F138.32
cortex, adult.CNhs10473.12-14D530.59
cortex, neonate N30.CNhs11107.1392-42F229.66
diencephalon, adult.CNhs10482.20-12F232.41
diencephalon, neonate N30.CNhs11201.1388-42B230.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A235.95
epididymis, adult.CNhs10490.58-23B223.00
eyeball, adult.CNhs10484.31-12G426.31
eyeball, embryo E12.CNhs11016.345-16C645.02
eyeball, embryo E14.CNhs10521.399-16E235.86
eyeball, embryo E15.CNhs10593.426-16C941.59
eyeball, embryo E17.CNhs11023.1261-18D444.16
eyeball, neonate N00.CNhs11207.633-15C639.67
eyeball, neonate N01.CNhs11140.1532-43E749.07
eyeball, neonate N02.CNhs11205.1551-44G838.79
eyeball, neonate N16.CNhs11188.777-19A239.06
forelimb, embryo E11.CNhs10596.335-25E241.17
forelimb, embryo E12.CNhs10600.359-14H249.92
forelimb, embryo E13.CNhs10589.384-1E249.09
forelimb, embryo E14.CNhs10577.413-26A838.80
forelimb, embryo E15.CNhs11007.437-20E750.60
forelimb, embryo E17.CNhs10598.1517-43C438.31
forelimb, embryo E18.CNhs11008.1520-43B542.80
gonad, embryo E13.CNhs11044.1564-45I632.84
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C834.41
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D235.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D530.69
heart, embryo E11.CNhs10586.331-24E933.97
heart, embryo E12.CNhs11015.353-12F536.12
heart, embryo E13.CNhs11013.376-3I939.43
heart, embryo E14.CNhs10597.403-26D441.19
heart, embryo E15.CNhs11017.431-16C837.19
heart, embryo E16.CNhs11021.457-17C639.18
heart, embryo E17.CNhs11025.479-18E539.76
heart, embryo E18.CNhs11030.1283-20G334.61
heart, neonate N00.CNhs11213.639-21E335.61
heart, neonate N03.CNhs11221.1349-25I233.90
heart, neonate N10.CNhs11118.749-24G138.58
heart, neonate N16.CNhs11209.782-15G134.05
heart, neonate N20.CNhs11127.821-26I629.97
heart, neonate N25.CNhs11196.1351-25D331.83
heart, neonate N30.CNhs11202.1390-42D230.06
hippocampus, adult.CNhs10478.13-16E838.90
hippocampus, neonate N00.CNhs11228.627-43G135.71
intestinal mucosa, adult.CNhs10506.860-29I323.79
intestine, adult.CNhs10496.178-9A321.16
intestine, embryo E12.CNhs11019.1251-16I549.48
intestine, embryo E13.CNhs11010.381-16D540.18
intestine, embryo E15.CNhs10602.976-16D837.63
intestine, embryo E16.CNhs10585.463-22H429.65
intestine, embryo E17.CNhs10582.482-18D322.02
intestine, embryo E18.CNhs10526.1289-20F728.91
intestine, neonate N00.CNhs11126.644-26D120.40
intestine, neonate N01.CNhs11192.1322-23E919.27
intestine, neonate N06.CNhs11102.688-20B820.11
intestine, neonate N07.CNhs11095.720-20F221.49
intestine, neonate N10.CNhs11098.755-23A526.52
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E330.26
intestine, neonate N30.CNhs11131.1384-42G123.70
kidney, embryo E14.CNhs10606.411-4I938.12
kidney, embryo E15.CNhs10997.434-16F833.25
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I233.60
kidney, embryo E18.CNhs11001.1288-20C731.23
kidney, neonate N00.CNhs11214.646-21G728.76
kidney, neonate N10.CNhs11206.758-6D530.10
kidney, neonate N20.CNhs11113.832-19I134.39
kidney, neonate N25.CNhs11122.1353-25F331.24
kidney, neonate N30.CNhs11203.1385-42H126.41
liver, adult pregnant day01.CNhs10466.508-5B225.49
liver, embryo E12.CNhs10601.355-15F839.54
liver, embryo E13.CNhs10524.378-3H637.54
liver, embryo E14.CNhs10594.409-16E144.07
liver, embryo E15.CNhs10520.433-16D734.08
liver, embryo E16.CNhs10523.462-17F540.52
liver, embryo E17.CNhs10510.481-18A331.06
liver, embryo E18.CNhs10579.499-43G427.62
liver, neonate N00.CNhs11117.641-24F426.10
liver, neonate N03.CNhs11123.1345-25G236.79
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H230.52
liver, neonate N10.CNhs11115.751-24B931.20
liver, neonate N20.CNhs11220.823-25A322.73
liver, neonate N25.CNhs11198.1368-26H119.20
liver, neonate N30.CNhs11106.1382-42D119.78
lung, adult.CNhs10474.28-22B149.33
lung, embryo E12.CNhs10522.354-16G236.00
lung, embryo E14.CNhs10604.404-26F848.24
lung, embryo E15.CNhs11020.432-17C536.16
lung, embryo E16.CNhs10998.458-17B642.01
lung, embryo E17.CNhs10605.480-44A641.71
lung, embryo E18.CNhs10583.1287-20I634.99
lung, neonate N00.CNhs11224.640-42C634.54
lung, neonate N06.CNhs11212.683-20E551.23
lung, neonate N07.CNhs11111.715-19A343.85
lung, neonate N10.CNhs11219.750-23E648.16
lung, neonate N20.CNhs11109.822-18A454.57
lung, neonate N25.CNhs11119.1359-25C744.21
lung, neonate N30.CNhs11133.1394-42H245.56
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A131.67
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A120.67
mammary gland, adult lactating day02.CNhs10480.595-22B626.06
mammary gland, adult pregnant day19.CNhs10476.588-5H230.08
medulla oblongata, adult.CNhs10477.17-12C233.56
medulla oblongata, neonate N30.CNhs11200.1396-42A331.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.66
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.72
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.35
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D835.87
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D433.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.10
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D641.11
olfactory brain, adult.CNhs10489.18-22I951.41
ovary, adult.CNhs10507.91-2I740.74
ovary, embryo E18.CNhs11040.505-44H735.44
ovary, neonate N00.CNhs11217.1299-22I424.60
oviduct, adult pregnant day01.CNhs10500.988-6G644.71
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F427.19
pancreas, embryo E15.CNhs11042.1556-45F222.07
pancreas, embryo E16.CNhs11003.460-26E521.31
pancreas, embryo E17.CNhs10599.1558-45G322.44
pancreas, embryo E18.CNhs10580.1535-43I730.13
pancreas, neonate N00.CNhs11105.645-26G929.46
pancreas, neonate N01.CNhs11138.1531-43D725.81
pancreas, neonate N02.CNhs11139.1539-43D824.95
pancreas, neonate N16.CNhs11136.787-43B627.81
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G854.13
pituitary gland, embryo E12.CNhs11018.346-16E640.15
pituitary gland, embryo E13.CNhs11009.370-44C736.87
pituitary gland, embryo E14.CNhs11037.398-44A527.86
pituitary gland, embryo E15.CNhs10592.427-16B940.26
pituitary gland, embryo E16.CNhs11036.449-43F628.18
pituitary gland, embryo E17.CNhs11039.1265-44F536.04
pituitary gland, neonate N00.CNhs11190.1308-22E926.79
placenta, adult pregnant day10.CNhs10472.539-13I726.75
placenta, adult pregnant day17.CNhs10464.577-18G331.14
prostate, adult.CNhs10470.859-1F822.05
skin, adult.CNhs10492.30-1C333.14
skin, neonate N00.CNhs11124.650-25G436.33
skin, neonate N03.CNhs11215.662-22H338.18
skin, neonate N06.CNhs11097.693-20I532.47
skin, neonate N10.CNhs11108.762-6C439.72
small intestine, neonate N16.CNhs11114.790-21I127.40
spinal cord, adult.CNhs10505.24-13C928.74
spleen, adult.CNhs10465.25-2G239.98
spleen, embryo E16.CNhs11035.461-43C124.97
spleen, embryo E18.CNhs11011.1271-21F241.67
spleen, neonate N10.CNhs11116.752-24D152.37
spleen, neonate N20.CNhs11112.824-19H150.99
spleen, neonate N25.CNhs11099.1354-25G345.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C948.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D343.67
stomach, adult.CNhs10503.33-1H636.28
stomach, embryo E12.CNhs10588.356-43E337.33
stomach, embryo E15.CNhs10603.1252-16G840.05
stomach, embryo E16.CNhs11022.459-17D431.65
stomach, embryo E17.CNhs11006.1035-18D531.78
stomach, embryo E18.CNhs10999.1286-20C628.61
stomach, neonate N03.CNhs11193.1340-24B829.94
stomach, neonate N07.CNhs11210.718-18A927.03
stomach, neonate N25.CNhs11104.1355-25E425.91
stomach, neonate N30.CNhs11134.1386-42I129.42
submandibular gland, adult.CNhs10469.59-29C124.85
testis, adult.CNhs10504.57-7G574.41
testis, embryo E13.CNhs11031.389-23F536.48
testis, embryo E15.CNhs11034.443-27C528.96
testis, embryo E16.CNhs11033.470-26G532.86
testis, embryo E17.CNhs11029.486-18I524.80
testis, embryo E18.CNhs11027.503-18G538.69
testis, neonate N00.CNhs11189.1300-22B731.57
testis, neonate N07.CNhs11222.726-26I429.56
testis, neonate N10.CNhs11204.763-44D942.36
testis, neonate N20.CNhs11110.839-18H366.19
testis, neonate N30.CNhs11130.1391-42E265.67
thymus, adult.CNhs10471.38-12B566.99
thymus, embryo E14.CNhs11041.402-44I422.91
thymus, embryo E15.CNhs11005.430-45I231.33
thymus, embryo E16.CNhs11002.456-26C540.80
thymus, embryo E17.CNhs10581.478-18C136.88
thymus, embryo E18.CNhs10595.1273-19G446.29
thymus, neonate N02.CNhs11181.1541-43F847.72
thymus, neonate N03.CNhs11137.2104-43C748.89
thymus, neonate N06.CNhs11197.681-26C459.07
thymus, neonate N07.CNhs11211.713-19D350.68
thymus, neonate N10.CNhs11194.748-24E459.29
thymus, neonate N20.CNhs11186.820-7A256.23
thymus, neonate N25.CNhs11125.1362-25G756.48
thymus, neonate N30.CNhs11132.1393-42G258.32
tongue, adult.CNhs10499.32-1B431.97
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F732.57
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.02
urinary bladder, adult.CNhs10481.879-12E441.34
uterus, adult pregnant day19.CNhs10497.590-15F529.09
uterus, adult.CNhs10509.92-27E534.25
vagina, adult.CNhs10502.89-27D534.94
vesicular gland, adult.CNhs10491.51-27F833.61
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I844.01
whole body, embryo E12.CNhs10587.857-27C958.26
whole body, embryo E13.CNhs10512.372-23H235.34
whole body, embryo E14.5.CNhs10578.420-27D239.14
whole body, embryo E14.CNhs10519.395-14B124.94
whole body, embryo E16.CNhs10514.453-14F220.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G532.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G531.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G531.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G534.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.39
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G533.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G532.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.29
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.32
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G536.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G526.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.72
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G531.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G533.11
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.47
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G531.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.00
whole body, embryo E17.5.CNhs10513.490-9F925.46
whole body, embryo E17.CNhs10517.475-3I531.48
whole body, embryo E18.CNhs10516.493-3B334.62
whole body, neonate N00.CNhs10525.657-19C233.52
whole body, neonate N01.CNhs10576.659-23C624.48
whole body, neonate N06.CNhs10515.692-21D130.44
whole body, neonate N10.CNhs10518.761-6B426.66





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anterior region of body1.73e-0943
primordium6.31e-09134
respiratory tract2.17e-0841
hemopoietic organ5.83e-0829
immune organ5.83e-0829
respiratory system6.95e-0842
mixed endoderm/mesoderm-derived structure1.84e-0735
lateral plate mesoderm3.15e-0787
craniocervical region3.36e-0736
mesoderm6.24e-07120
mesoderm-derived structure6.24e-07120
presumptive mesoderm6.24e-07120
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