FFCP PHASE1:Mm9::chr19:4712204..4712218,+: Difference between revisions
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{{FFCP|EntrezGene=20743|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=-189bp_to_uc008gao.1_5end|description=CAGE_peak_10_at_Spnb3_5end|id=chr19:4712204..4712218,+|ontology_enrichment_celltype=CL:0000117!3.60e-15!23;CL:0000337!3.60e-15!23;CL:0000540!2.67e-09!33;CL:0000047!2.67e-09!33;CL:0000031!2.67e-09!33;CL:0000404!2.67e-09!33;CL:0000393!8.01e-07!39;CL:0000211!8.01e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-12,23;CL:0000337,1.64e-12,23;CL:0000540,5.29e-08,33;CL:0000047,5.29e-08,33;CL:0000031,5.29e-08,33;CL:0000404,5.29e-08,33;CL:0000120,1.22e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.86e-26!63;UBERON:0002346!1.39e-25!71;UBERON:0003075!1.39e-25!71;UBERON:0007284!1.39e-25!71;UBERON:0004121!2.80e-22!102;UBERON:0000924!2.80e-22!102;UBERON:0006601!2.80e-22!102;UBERON:0001049!1.21e-21!52;UBERON:0005068!1.21e-21!52;UBERON:0006241!1.21e-21!52;UBERON:0007135!1.21e-21!52;UBERON:0003056!1.22e-21!49;UBERON:0000955!1.86e-20!50;UBERON:0006238!1.86e-20!50;UBERON:0001017!2.63e-20!73;UBERON:0005743!2.63e-20!73;UBERON:0002616!1.80e-19!49;UBERON:0000073!2.60e-19!75;UBERON:0001016!2.60e-19!75;UBERON:0002020!1.51e-17!34;UBERON:0007811!1.51e-15!86;UBERON:0003080!1.18e-14!40;UBERON:0002791!6.16e-14!29;UBERON:0003528!6.16e-14!29;UBERON:0001893!6.16e-14!29;UBERON:0002780!9.73e-14!39;UBERON:0001890!9.73e-14!39;UBERON:0006240!9.73e-14!39;UBERON:0000153!1.25e-13!94;UBERON:0000970!1.74e-08!9;UBERON:0000019!1.74e-08!9;UBERON:0000047!1.74e-08!9;UBERON:0004088!1.74e-08!9;UBERON:0002104!1.74e-08!9;UBERON:0001456!1.74e-08!9;UBERON:0003072!1.74e-08!9;UBERON:0003071!1.74e-08!9;UBERON:0004128!1.74e-08!9;UBERON:0000956!5.05e-08!21;UBERON:0001869!5.05e-08!21;UBERON:0000203!5.05e-08!21;UBERON:0003076!7.02e-08!12;UBERON:0003057!7.02e-08!12;UBERON:0002420!8.08e-08!8;UBERON:0007245!8.08e-08!8;UBERON:0010009!8.08e-08!8;UBERON:0010011!8.08e-08!8;UBERON:0000454!8.08e-08!8;UBERON:0002298!5.46e-07!6;UBERON:0000020!6.76e-07!12;UBERON:0001032!6.76e-07!12;UBERON:0004456!6.76e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.96e-28,64;UBERON:0003075,3.96e-28,64;UBERON:0007284,3.96e-28,64;UBERON:0004121,7.21e-27,95;UBERON:0000924,7.21e-27,95;UBERON:0006601,7.21e-27,95;UBERON:0001017,1.14e-25,73;UBERON:0001016,8.14e-25,75;UBERON:0000073,2.00e-24,54;UBERON:0010371,6.85e-24,73;UBERON:0001049,1.85e-23,52;UBERON:0005068,1.85e-23,52;UBERON:0006241,1.85e-23,52;UBERON:0007135,1.85e-23,52;UBERON:0000955,5.47e-22,47;UBERON:0006238,5.47e-22,47;UBERON:0003056,2.94e-20,49;UBERON:0002616,3.45e-20,46;UBERON:0010314,1.16e-17,92;UBERON:0002020,2.56e-15,34;UBERON:0003080,1.59e-14,40;UBERON:0003528,5.91e-14,29;UBERON:0002791,5.91e-14,29;UBERON:0001893,5.91e-14,29;UBERON:0002780,5.96e-13,39;UBERON:0001890,5.96e-13,39;UBERON:0006240,5.96e-13,39;UBERON:0003076,3.40e-10,12;UBERON:0003057,3.40e-10,12;UBERON:0002021,7.60e-09,10;UBERON:0000411,7.60e-09,10;UBERON:0001950,7.60e-09,10;UBERON:0000956,3.26e-08,21;UBERON:0001869,3.26e-08,21;UBERON:0000203,3.26e-08,21;UBERON:0000025,9.37e-08,114;UBERON:0004733,9.55e-08,6;UBERON:0004732,9.55e-08,6;UBERON:0002028,9.55e-08,6;UBERON:0007277,9.55e-08,6;UBERON:0002420,1.51e-07,8;UBERON:0007245,1.51e-07,8;UBERON:0010009,1.51e-07,8;UBERON:0010011,1.51e-07,8;UBERON:0000454,1.51e-07,8;UBERON:0000970,6.24e-07,9;UBERON:0000019,6.24e-07,9;UBERON:0000047,6.24e-07,9;UBERON:0010312,6.24e-07,9;UBERON:0004088,6.24e-07,9;UBERON:0002104,6.24e-07,9;UBERON:0001456,6.24e-07,9;UBERON:0003072,6.24e-07,9;UBERON:0004128,6.24e-07,9;UBERON:0003071,6.24e-07,9;UBERON:0004111,6.69e-07,122|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,1.03689612308478,0.675029691658453,0,1.42825492201902,0.662605622854841,0.979926393719632,0.383381884072945,0,2.20231761998777,0.893811366596314,1.0752457327937,1.31886287730194,0.640413505216868,1.04182674111352,2.23346399201105,1.12552522006336,0.763991238884051,0.294628585473668,0.996601765593721,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,7.31951992528868,9.63454851341893,0,0,0,0,3.2953940669061,2.74500361691176,0.753926112677186,1.56441888173049,0.767146371990992,1.45451631191692,1.94689515681309,0,0,0,0.420883711772948,0.520481771850815,0.689706313300419,1.80062129805349,0.90422890701429,2.38127747029647,1.2811372028485,1.59292931751539,1.81092359517311,0.431135985865684,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.92614151141356,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.99259867206745,0,0,0,0,0,0,0,0,0,0.292255857911312,0,3.21321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.897099276263873,0.330916980914195,0.194451188344048,0.645799117388655,0.844780627453891,0.352071715937262,0.13020438484395,0.419437377702843,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.14579102687879,0.515559547031063,0,3.7769694869485,2.02506750069542,1.80128481289688,0.453142408984205,0,0.62272408550506,1.19707462020309,0.512200817262403,0,0,0,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0,0.229741875822453,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.999242311751784,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p10@Spnb3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20743 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-189bp_to_uc008gao.1_5end | |||
|cluster_id=chr19:4712204..4712218,+ | |||
|description=CAGE_peak_10_at_Spnb3_5end | |||
|id=chr19:4712204..4712218,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.60e-15!23;CL:0000337!3.60e-15!23;CL:0000540!2.67e-09!33;CL:0000047!2.67e-09!33;CL:0000031!2.67e-09!33;CL:0000404!2.67e-09!33;CL:0000393!8.01e-07!39;CL:0000211!8.01e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-12,23;CL:0000337,1.64e-12,23;CL:0000540,5.29e-08,33;CL:0000047,5.29e-08,33;CL:0000031,5.29e-08,33;CL:0000404,5.29e-08,33;CL:0000120,1.22e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.86e-26!63;UBERON:0002346!1.39e-25!71;UBERON:0003075!1.39e-25!71;UBERON:0007284!1.39e-25!71;UBERON:0004121!2.80e-22!102;UBERON:0000924!2.80e-22!102;UBERON:0006601!2.80e-22!102;UBERON:0001049!1.21e-21!52;UBERON:0005068!1.21e-21!52;UBERON:0006241!1.21e-21!52;UBERON:0007135!1.21e-21!52;UBERON:0003056!1.22e-21!49;UBERON:0000955!1.86e-20!50;UBERON:0006238!1.86e-20!50;UBERON:0001017!2.63e-20!73;UBERON:0005743!2.63e-20!73;UBERON:0002616!1.80e-19!49;UBERON:0000073!2.60e-19!75;UBERON:0001016!2.60e-19!75;UBERON:0002020!1.51e-17!34;UBERON:0007811!1.51e-15!86;UBERON:0003080!1.18e-14!40;UBERON:0002791!6.16e-14!29;UBERON:0003528!6.16e-14!29;UBERON:0001893!6.16e-14!29;UBERON:0002780!9.73e-14!39;UBERON:0001890!9.73e-14!39;UBERON:0006240!9.73e-14!39;UBERON:0000153!1.25e-13!94;UBERON:0000970!1.74e-08!9;UBERON:0000019!1.74e-08!9;UBERON:0000047!1.74e-08!9;UBERON:0004088!1.74e-08!9;UBERON:0002104!1.74e-08!9;UBERON:0001456!1.74e-08!9;UBERON:0003072!1.74e-08!9;UBERON:0003071!1.74e-08!9;UBERON:0004128!1.74e-08!9;UBERON:0000956!5.05e-08!21;UBERON:0001869!5.05e-08!21;UBERON:0000203!5.05e-08!21;UBERON:0003076!7.02e-08!12;UBERON:0003057!7.02e-08!12;UBERON:0002420!8.08e-08!8;UBERON:0007245!8.08e-08!8;UBERON:0010009!8.08e-08!8;UBERON:0010011!8.08e-08!8;UBERON:0000454!8.08e-08!8;UBERON:0002298!5.46e-07!6;UBERON:0000020!6.76e-07!12;UBERON:0001032!6.76e-07!12;UBERON:0004456!6.76e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.96e-28,64;UBERON:0003075,3.96e-28,64;UBERON:0007284,3.96e-28,64;UBERON:0004121,7.21e-27,95;UBERON:0000924,7.21e-27,95;UBERON:0006601,7.21e-27,95;UBERON:0001017,1.14e-25,73;UBERON:0001016,8.14e-25,75;UBERON:0000073,2.00e-24,54;UBERON:0010371,6.85e-24,73;UBERON:0001049,1.85e-23,52;UBERON:0005068,1.85e-23,52;UBERON:0006241,1.85e-23,52;UBERON:0007135,1.85e-23,52;UBERON:0000955,5.47e-22,47;UBERON:0006238,5.47e-22,47;UBERON:0003056,2.94e-20,49;UBERON:0002616,3.45e-20,46;UBERON:0010314,1.16e-17,92;UBERON:0002020,2.56e-15,34;UBERON:0003080,1.59e-14,40;UBERON:0003528,5.91e-14,29;UBERON:0002791,5.91e-14,29;UBERON:0001893,5.91e-14,29;UBERON:0002780,5.96e-13,39;UBERON:0001890,5.96e-13,39;UBERON:0006240,5.96e-13,39;UBERON:0003076,3.40e-10,12;UBERON:0003057,3.40e-10,12;UBERON:0002021,7.60e-09,10;UBERON:0000411,7.60e-09,10;UBERON:0001950,7.60e-09,10;UBERON:0000956,3.26e-08,21;UBERON:0001869,3.26e-08,21;UBERON:0000203,3.26e-08,21;UBERON:0000025,9.37e-08,114;UBERON:0004733,9.55e-08,6;UBERON:0004732,9.55e-08,6;UBERON:0002028,9.55e-08,6;UBERON:0007277,9.55e-08,6;UBERON:0002420,1.51e-07,8;UBERON:0007245,1.51e-07,8;UBERON:0010009,1.51e-07,8;UBERON:0010011,1.51e-07,8;UBERON:0000454,1.51e-07,8;UBERON:0000970,6.24e-07,9;UBERON:0000019,6.24e-07,9;UBERON:0000047,6.24e-07,9;UBERON:0010312,6.24e-07,9;UBERON:0004088,6.24e-07,9;UBERON:0002104,6.24e-07,9;UBERON:0001456,6.24e-07,9;UBERON:0003072,6.24e-07,9;UBERON:0004128,6.24e-07,9;UBERON:0003071,6.24e-07,9;UBERON:0004111,6.69e-07,122 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,1.03689612308478,0.675029691658453,0,1.42825492201902,0.662605622854841,0.979926393719632,0.383381884072945,0,2.20231761998777,0.893811366596314,1.0752457327937,1.31886287730194,0.640413505216868,1.04182674111352,2.23346399201105,1.12552522006336,0.763991238884051,0.294628585473668,0.996601765593721,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,7.31951992528868,9.63454851341893,0,0,0,0,3.2953940669061,2.74500361691176,0.753926112677186,1.56441888173049,0.767146371990992,1.45451631191692,1.94689515681309,0,0,0,0.420883711772948,0.520481771850815,0.689706313300419,1.80062129805349,0.90422890701429,2.38127747029647,1.2811372028485,1.59292931751539,1.81092359517311,0.431135985865684,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.92614151141356,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.99259867206745,0,0,0,0,0,0,0,0,0,0.292255857911312,0,3.21321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.897099276263873,0.330916980914195,0.194451188344048,0.645799117388655,0.844780627453891,0.352071715937262,0.13020438484395,0.419437377702843,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.14579102687879,0.515559547031063,0,3.7769694869485,2.02506750069542,1.80128481289688,0.453142408984205,0,0.62272408550506,1.19707462020309,0.512200817262403,0,0,0,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0,0.229741875822453,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.999242311751784,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p10@Spnb3 | |||
}} |
Revision as of 06:22, 4 August 2015
Short description: | p10@Spnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Spnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -189bp_to_uc008gao.1_5end |
EntrezGene: | 20743 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.64e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.64e-12 | 23 |
neuron | 5.29e-08 | 33 |
neuronal stem cell | 5.29e-08 | 33 |
neuroblast | 5.29e-08 | 33 |
electrically signaling cell | 5.29e-08 | 33 |
granule cell | 1.22e-07 | 3 |