FFCP PHASE1:Hg19::chr5:66300389..66300404,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375449 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19037 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-43bp_to_ENST00000261569,uc003juv.2,uc010ixa.2_5end | |||
|description=CAGE_peak_8_at_MAST4_5end | |||
|id=chr5:66300389..66300404,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.15e-08!43;CL:0000066!1.05e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.83e-12;42!CL:0002368;7.19e-10;13!CL:0002251;4.42e-08;20!CL:0000622;4.32e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.65e-15,42;CL:0000066,1.61e-12,253;CL:0002368,4.56e-10,13;CL:0000223,9.32e-10,58;CL:0002251,3.83e-08,20;CL:0000622,4.37e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.82e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.00e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.96e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.36e-11!169;UBERON:0000925!1.36e-11!169;UBERON:0006595!1.36e-11!169;UBERON:0001007!3.84e-10!155;UBERON:0001555!3.84e-10!155;UBERON:0007026!3.84e-10!155;UBERON:0001444!4.78e-10!48;UBERON:0000161!4.94e-10!35;UBERON:0000165!2.52e-09!28;UBERON:0000930!2.52e-09!28;UBERON:0001004!2.46e-08!72;UBERON:0000481!3.72e-08!347;UBERON:0000166!4.19e-08!21;UBERON:0000477!2.01e-07!286;UBERON:0003102!3.61e-07!95;UBERON:0000475!7.65e-07!365;UBERON:0000078!9.77e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;6.06e-13;28!UBERON:0000161;6.01e-10;19!UBERON:0000166;6.01e-10;19!UBERON:0001444;5.24e-09;48!UBERON:0007811;9.22e-09;52!UBERON:0000033;1.40e-08;50!UBERON:0000153;1.46e-08;54!UBERON:0001044;2.30e-08;6!UBERON:0003293;2.30e-08;6!UBERON:0003294;2.30e-08;6!UBERON:0010047;2.30e-08;6!UBERON:0003408;2.30e-08;6!UBERON:0000167;2.30e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.55e-16,160;UBERON:0000925,2.55e-16,160;UBERON:0006595,2.55e-16,160;UBERON:0000153,3.13e-14,62;UBERON:0007811,3.13e-14,62;UBERON:0001444,5.46e-14,49;UBERON:0001007,8.92e-14,145;UBERON:0001555,8.92e-14,145;UBERON:0007026,8.92e-14,145;UBERON:0001004,9.72e-14,74;UBERON:0000165,1.01e-13,29;UBERON:0000930,1.01e-13,29;UBERON:0000161,1.47e-13,36;UBERON:0000033,3.15e-13,56;UBERON:0000166,5.65e-13,22;UBERON:0004921,5.96e-10,118;UBERON:0003102,3.45e-09,99;UBERON:0001044,1.36e-08,6;UBERON:0003293,1.36e-08,6;UBERON:0003294,1.36e-08,6;UBERON:0010047,1.36e-08,6;UBERON:0000167,1.36e-08,6;UBERON:0003408,6.64e-08,10;UBERON:0000065,6.71e-08,54;UBERON:0001041,1.11e-07,87 | |||
|phase1_expression=0.726713517082227,0,1.40954404095971,0,0,0,0,0,0.783556884599516,0.245733936501509,0,0.436882744260345,0,0.74259811776028,0,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,0.492484232307152,0.612002073732759,0.313454721478088,0.572471974262113,1.23186982565596,0.376627918784408,0,0,0,0.786728553697808,0,0,0,2.10844143144775,1.47901604066715,0,0,0.880801318004542,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0.526768169550154,0,1.17903228824749,0.616804496998528,1.33749196312542,0,0.473447805734733,0,2.1167986808183,1.17842362989935,1.99380505125259,0.541607727530031,1.66518715643378,1.56071217071854,0.657751618414705,1.10540007114339,0.869409257205157,0.444859689486181,0.535081656179426,0,1.35971211237079,0.766440987203842,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0,0,0.50133791063589,0.434539556882471,0.795285947051099,0.486634870302636,3.59232305223458,4.21285855178871,5.27008714158756,1.11332214173056,6.19301990097322,4.44941331341315,0,0,0,0.238490624305342,0,0,1.19257444420023,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,0.626984899610432,1.03366703667732,1.06729878806013,1.00416183829401,0.402829317109147,0,1.70843440283719,0.367663080345869,1.62028389576352,0.803697554556718,1.12264686313085,0.112611480483322,0,0,0.366403487860815,0,0,9.15797509499322,0,0.379891534993739,1.05927344650575,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0.576175924479999,0,0,1.1409436430889,0.448346041655403,0.23486899728753,0,0.561803226808994,0.408308342509787,0.61417158655884,0,0,0.247266929278557,0,0,1.0100166837244,1.12606667884768,1.38532057742091,0.877955241761676,0,0.751190294532984,0.453728732640084,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0.292311015483596,0.504867548488229,0.368199594569197,0.484938170456436,0.710019185033229,0,0.169560592310488,3.09217365061275,3.54569956768085,2.86804595389004,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,1.02940686179115,2.85350742062426,3.37205259772859,1.00528972411631,4.62942225792648,0,0,1.44331342025273,0.463721619900307,2.81780866165972,0.866198686566443,2.31492756288305,2.09279567458058,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,2.18376766658517,1.55952606966625,2.95543124919399,7.55648240136301,1.53353071666084,10.3459279958148,0.44024217006613,0.414656231081544,1.44119953416961,0.50496973370552,0,0,0,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0,0.22001485746285,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0.958499421966331,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0.431255149719035,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0,0.623912584592421,0.713715955188647,0.157702415033935,0.585707074963566,0.902838299183157,0,0,0,0.368738337083406,0.60818530127658,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0.767309866440312,0.280660094433074,0.512556597022804,0.511707249066704,0.160853921143607,0,0.308419387605311,0.532685175939381,0.492762936082855,0,0.581051892299796,0.483437798366489,3.20810352485256,7.4585601038076,0.459257792658427,0,0.131124414959424,1.35359883872224,1.30926073077505,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0,0,0.541892875087706,0,1.01950509218015,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0.984043937099117,0,1.854738209659,0.0915694648183434,0,2.29706215198469,1.30012049207304,0,0.290012154876366,0.462145851343933,0.307007349452259,0.275673144969061,0.214840489736547,0,0.255679882248303,0.178064071293475,3.14041339185858,2.30628080838127,15.1859127868555,1.51736671283325,0,0,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.286249773483982,0.744316738719335,1.2655176988749,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0.899362287916574,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,0.731140468893853,0,0,0.565621727814851,0,0,1.32687795048244,0.438450885253763,0.578775534266688,1.31178950409327,1.82619339266434,0.6196469961995,0.563391205064483,0.143411352204052,0.196498082026242,0.7133421029625,0.709522128141196,0.844430541190656,0.329294892959902,0,0.349934720244983,2.59799704358883,3.35151137767894,2.17781969722645,2.07116361708914,2.58303223602738,0,4.87773168890343,4.36474460393223,0,0,0,0.2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| |||
|short_description=p8@MAST4 | |||
}} |
Revision as of 05:43, 22 January 2014
Short description: | p8@MAST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MAST4_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000261569, uc003juv.2, uc010ixa.2_5end |
EntrezGene: | MAST4 |
HGNC: | 19037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.65e-15 | 42 |
epithelial cell | 1.61e-12 | 253 |
respiratory epithelial cell | 4.56e-10 | 13 |
endodermal cell | 9.32e-10 | 58 |
epithelial cell of alimentary canal | 3.83e-08 | 20 |
acinar cell | 4.37e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.55e-16 | 160 |
endoderm | 2.55e-16 | 160 |
presumptive endoderm | 2.55e-16 | 160 |
anterior region of body | 3.13e-14 | 62 |
craniocervical region | 3.13e-14 | 62 |
subdivision of head | 5.46e-14 | 49 |
digestive system | 8.92e-14 | 145 |
digestive tract | 8.92e-14 | 145 |
primitive gut | 8.92e-14 | 145 |
respiratory system | 9.72e-14 | 74 |
mouth | 1.01e-13 | 29 |
stomodeum | 1.01e-13 | 29 |
orifice | 1.47e-13 | 36 |
head | 3.15e-13 | 56 |
oral opening | 5.65e-13 | 22 |
subdivision of digestive tract | 5.96e-10 | 118 |
surface structure | 3.45e-09 | 99 |
saliva-secreting gland | 1.36e-08 | 6 |
gland of oral region | 1.36e-08 | 6 |
gland of foregut | 1.36e-08 | 6 |
oral gland | 1.36e-08 | 6 |
oral cavity | 1.36e-08 | 6 |
gland of gut | 6.64e-08 | 10 |
respiratory tract | 6.71e-08 | 54 |
foregut | 1.11e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.96e-12 | 14 |