FFCP PHASE1:Mm9::chr17:70318415..70318426,+: Difference between revisions
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{{FFCP|EntrezGene=224997|HGNC=|MCL_coexpression_id=1|UniProt=Q9D415|association_with_transcript=2bp_to_ENSMUST00000133983_5end|description=CAGE_peak_10_at_Dlgap1_5end|id=chr17:70318415..70318426,+|ontology_enrichment_celltype=CL:0000117!1.54e-15!23;CL:0000337!1.54e-15!23;CL:0000540!1.89e-11!33;CL:0000047!1.89e-11!33;CL:0000031!1.89e-11!33;CL:0000404!1.89e-11!33;CL:0000393!1.82e-08!39;CL:0000211!1.82e-08!39;CL:0002319!1.27e-07!43;CL:0000221!2.80e-07!44;CL:0000133!2.80e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.95e-17,23;CL:0000337,3.95e-17,23;CL:0000540,7.07e-11,33;CL:0000047,7.07e-11,33;CL:0000031,7.07e-11,33;CL:0000404,7.07e-11,33;CL:0000393,1.10e-08,39;CL:0000211,1.10e-08,39;CL:0002612,1.08e-07,3;CL:0002319,1.43e-07,43;CL:0000221,2.53e-07,44;CL:0000133,2.53e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.96e-29!52;UBERON:0005068!2.96e-29!52;UBERON:0006241!2.96e-29!52;UBERON:0007135!2.96e-29!52;UBERON:0002020!1.87e-28!34;UBERON:0002346!4.66e-26!71;UBERON:0003075!4.66e-26!71;UBERON:0007284!4.66e-26!71;UBERON:0001017!9.11e-26!73;UBERON:0005743!9.11e-26!73;UBERON:0000955!1.86e-25!50;UBERON:0006238!1.86e-25!50;UBERON:0000073!1.45e-24!75;UBERON:0001016!1.45e-24!75;UBERON:0002616!2.25e-24!49;UBERON:0002791!2.33e-23!29;UBERON:0003528!2.33e-23!29;UBERON:0001893!2.33e-23!29;UBERON:0000033!2.55e-22!63;UBERON:0003080!7.03e-22!40;UBERON:0002780!5.15e-21!39;UBERON:0001890!5.15e-21!39;UBERON:0006240!5.15e-21!39;UBERON:0003056!5.20e-20!49;UBERON:0004121!3.11e-19!102;UBERON:0000924!3.11e-19!102;UBERON:0006601!3.11e-19!102;UBERON:0000956!7.87e-17!21;UBERON:0001869!7.87e-17!21;UBERON:0000203!7.87e-17!21;UBERON:0002619!6.18e-14!17;UBERON:0007811!4.46e-12!86;UBERON:0002021!4.90e-11!10;UBERON:0000411!4.90e-11!10;UBERON:0001950!4.90e-11!10;UBERON:0000153!8.34e-10!94;UBERON:0003076!9.19e-08!12;UBERON:0003057!9.19e-08!12;UBERON:0002420!1.23e-07!8;UBERON:0007245!1.23e-07!8;UBERON:0010009!1.23e-07!8;UBERON:0010011!1.23e-07!8;UBERON:0000454!1.23e-07!8;UBERON:0002240!6.27e-07!6;UBERON:0005174!6.27e-07!6;UBERON:0001137!6.27e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.61e-42,54;UBERON:0001049,1.34e-41,52;UBERON:0005068,1.34e-41,52;UBERON:0006241,1.34e-41,52;UBERON:0007135,1.34e-41,52;UBERON:0002020,2.00e-41,34;UBERON:0001017,6.29e-36,73;UBERON:0001016,9.50e-35,75;UBERON:0000955,9.18e-33,47;UBERON:0006238,9.18e-33,47;UBERON:0002346,2.52e-32,64;UBERON:0003075,2.52e-32,64;UBERON:0007284,2.52e-32,64;UBERON:0003528,2.07e-31,29;UBERON:0002791,2.07e-31,29;UBERON:0001893,2.07e-31,29;UBERON:0002616,8.67e-31,46;UBERON:0003080,1.70e-28,40;UBERON:0010371,2.29e-27,73;UBERON:0002780,6.94e-27,39;UBERON:0001890,6.94e-27,39;UBERON:0006240,6.94e-27,39;UBERON:0004121,1.11e-25,95;UBERON:0000924,1.11e-25,95;UBERON:0006601,1.11e-25,95;UBERON:0003056,4.17e-22,49;UBERON:0002021,1.38e-21,10;UBERON:0000411,1.38e-21,10;UBERON:0001950,1.38e-21,10;UBERON:0000956,3.84e-21,21;UBERON:0001869,3.84e-21,21;UBERON:0000203,3.84e-21,21;UBERON:0002619,3.64e-20,17;UBERON:0010314,4.40e-20,92;UBERON:0000025,1.11e-14,114;UBERON:0004111,3.35e-13,122;UBERON:0003076,4.40e-13,12;UBERON:0003057,4.40e-13,12;UBERON:0002240,6.46e-13,6;UBERON:0005174,6.46e-13,6;UBERON:0001137,6.46e-13,6;UBERON:0001948,1.77e-11,5;UBERON:0002315,1.77e-11,5;UBERON:0002420,2.79e-11,8;UBERON:0007245,2.79e-11,8;UBERON:0010009,2.79e-11,8;UBERON:0010011,2.79e-11,8;UBERON:0000454,2.79e-11,8;UBERON:0011216,3.01e-08,194;UBERON:0002950,3.06e-08,4;UBERON:0001891,3.06e-08,4;UBERON:0009616,3.06e-08,4;UBERON:0010286,3.06e-08,4;UBERON:0002257,1.08e-07,3;UBERON:0000483,6.41e-07,174;UBERON:0000119,9.41e-07,176|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,0,0,0,0,0,0,0,0,0.518448061542388,1.4850653216486,0.630974884054146,3.14216082844184,2.65042249141936,1.5923803897944,0.766763768145891,0.919218786610021,0,1.91531007127782,1.53606533256243,1.71452174049252,0.914876436024097,1.04182674111352,1.67509799400829,1.68828783009504,1.68078072554491,2.94628585473668,3.27454865837937,4.84638559145781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,1.79748767285787,2.28750301409313,1.63350657746724,4.17178368461463,6.39288643325826,2.70124457927428,4.05603157669394,0,0,0,0,0,0,0,0,0.340182495756639,0.384341160854549,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,2.6755199218614,0,0,0,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,0.820481806145422,0,0,0,0,0.430846795465598,0,0,0,0.404810701674894,0,0,9.96096080907602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.68260189205742,1.71868654031819,3.43706364687375,4.11049511862385,4.5323633843382,2.70009000092722,1.80128481289688,3.62513927187364,5.1776031175182,0,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.883193520806384,1.02860775715625,0.177475806159338,0.238436189947321,1.16277133305863,0.470546902076653,0.423073039458382,1.09756783723664,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.689531376628944,0.409231043169689,0.77468420592983,0.771626443924566,1.49886346762768,0,0.644613162144895,0.191288332068843,0.220591419119515,0|short_description=p10@Dlgap1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:224997 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D415 | |||
|association_with_transcript=2bp_to_ENSMUST00000133983_5end | |||
|cluster_id=chr17:70318415..70318426,+ | |||
|description=CAGE_peak_10_at_Dlgap1_5end | |||
|id=chr17:70318415..70318426,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-15!23;CL:0000337!1.54e-15!23;CL:0000540!1.89e-11!33;CL:0000047!1.89e-11!33;CL:0000031!1.89e-11!33;CL:0000404!1.89e-11!33;CL:0000393!1.82e-08!39;CL:0000211!1.82e-08!39;CL:0002319!1.27e-07!43;CL:0000221!2.80e-07!44;CL:0000133!2.80e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.95e-17,23;CL:0000337,3.95e-17,23;CL:0000540,7.07e-11,33;CL:0000047,7.07e-11,33;CL:0000031,7.07e-11,33;CL:0000404,7.07e-11,33;CL:0000393,1.10e-08,39;CL:0000211,1.10e-08,39;CL:0002612,1.08e-07,3;CL:0002319,1.43e-07,43;CL:0000221,2.53e-07,44;CL:0000133,2.53e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.96e-29!52;UBERON:0005068!2.96e-29!52;UBERON:0006241!2.96e-29!52;UBERON:0007135!2.96e-29!52;UBERON:0002020!1.87e-28!34;UBERON:0002346!4.66e-26!71;UBERON:0003075!4.66e-26!71;UBERON:0007284!4.66e-26!71;UBERON:0001017!9.11e-26!73;UBERON:0005743!9.11e-26!73;UBERON:0000955!1.86e-25!50;UBERON:0006238!1.86e-25!50;UBERON:0000073!1.45e-24!75;UBERON:0001016!1.45e-24!75;UBERON:0002616!2.25e-24!49;UBERON:0002791!2.33e-23!29;UBERON:0003528!2.33e-23!29;UBERON:0001893!2.33e-23!29;UBERON:0000033!2.55e-22!63;UBERON:0003080!7.03e-22!40;UBERON:0002780!5.15e-21!39;UBERON:0001890!5.15e-21!39;UBERON:0006240!5.15e-21!39;UBERON:0003056!5.20e-20!49;UBERON:0004121!3.11e-19!102;UBERON:0000924!3.11e-19!102;UBERON:0006601!3.11e-19!102;UBERON:0000956!7.87e-17!21;UBERON:0001869!7.87e-17!21;UBERON:0000203!7.87e-17!21;UBERON:0002619!6.18e-14!17;UBERON:0007811!4.46e-12!86;UBERON:0002021!4.90e-11!10;UBERON:0000411!4.90e-11!10;UBERON:0001950!4.90e-11!10;UBERON:0000153!8.34e-10!94;UBERON:0003076!9.19e-08!12;UBERON:0003057!9.19e-08!12;UBERON:0002420!1.23e-07!8;UBERON:0007245!1.23e-07!8;UBERON:0010009!1.23e-07!8;UBERON:0010011!1.23e-07!8;UBERON:0000454!1.23e-07!8;UBERON:0002240!6.27e-07!6;UBERON:0005174!6.27e-07!6;UBERON:0001137!6.27e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.61e-42,54;UBERON:0001049,1.34e-41,52;UBERON:0005068,1.34e-41,52;UBERON:0006241,1.34e-41,52;UBERON:0007135,1.34e-41,52;UBERON:0002020,2.00e-41,34;UBERON:0001017,6.29e-36,73;UBERON:0001016,9.50e-35,75;UBERON:0000955,9.18e-33,47;UBERON:0006238,9.18e-33,47;UBERON:0002346,2.52e-32,64;UBERON:0003075,2.52e-32,64;UBERON:0007284,2.52e-32,64;UBERON:0003528,2.07e-31,29;UBERON:0002791,2.07e-31,29;UBERON:0001893,2.07e-31,29;UBERON:0002616,8.67e-31,46;UBERON:0003080,1.70e-28,40;UBERON:0010371,2.29e-27,73;UBERON:0002780,6.94e-27,39;UBERON:0001890,6.94e-27,39;UBERON:0006240,6.94e-27,39;UBERON:0004121,1.11e-25,95;UBERON:0000924,1.11e-25,95;UBERON:0006601,1.11e-25,95;UBERON:0003056,4.17e-22,49;UBERON:0002021,1.38e-21,10;UBERON:0000411,1.38e-21,10;UBERON:0001950,1.38e-21,10;UBERON:0000956,3.84e-21,21;UBERON:0001869,3.84e-21,21;UBERON:0000203,3.84e-21,21;UBERON:0002619,3.64e-20,17;UBERON:0010314,4.40e-20,92;UBERON:0000025,1.11e-14,114;UBERON:0004111,3.35e-13,122;UBERON:0003076,4.40e-13,12;UBERON:0003057,4.40e-13,12;UBERON:0002240,6.46e-13,6;UBERON:0005174,6.46e-13,6;UBERON:0001137,6.46e-13,6;UBERON:0001948,1.77e-11,5;UBERON:0002315,1.77e-11,5;UBERON:0002420,2.79e-11,8;UBERON:0007245,2.79e-11,8;UBERON:0010009,2.79e-11,8;UBERON:0010011,2.79e-11,8;UBERON:0000454,2.79e-11,8;UBERON:0011216,3.01e-08,194;UBERON:0002950,3.06e-08,4;UBERON:0001891,3.06e-08,4;UBERON:0009616,3.06e-08,4;UBERON:0010286,3.06e-08,4;UBERON:0002257,1.08e-07,3;UBERON:0000483,6.41e-07,174;UBERON:0000119,9.41e-07,176 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,0,0,0,0,0,0,0,0,0.518448061542388,1.4850653216486,0.630974884054146,3.14216082844184,2.65042249141936,1.5923803897944,0.766763768145891,0.919218786610021,0,1.91531007127782,1.53606533256243,1.71452174049252,0.914876436024097,1.04182674111352,1.67509799400829,1.68828783009504,1.68078072554491,2.94628585473668,3.27454865837937,4.84638559145781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,1.17112318804619,2.09446706813455,0,0,0,0,1.79748767285787,2.28750301409313,1.63350657746724,4.17178368461463,6.39288643325826,2.70124457927428,4.05603157669394,0,0,0,0,0,0,0,0,0.340182495756639,0.384341160854549,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,2.6755199218614,0,0,0,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,0.820481806145422,0,0,0,0,0.430846795465598,0,0,0,0.404810701674894,0,0,9.96096080907602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.68260189205742,1.71868654031819,3.43706364687375,4.11049511862385,4.5323633843382,2.70009000092722,1.80128481289688,3.62513927187364,5.1776031175182,0,0,0.170733605754134,0.729320151204882,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.883193520806384,1.02860775715625,0.177475806159338,0.238436189947321,1.16277133305863,0.470546902076653,0.423073039458382,1.09756783723664,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.689531376628944,0.409231043169689,0.77468420592983,0.771626443924566,1.49886346762768,0,0.644613162144895,0.191288332068843,0.220591419119515,0 | |||
|short_description=p10@Dlgap1 | |||
}} |
Revision as of 06:39, 5 August 2015
Short description: | p10@Dlgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Dlgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 2bp_to_ENSMUST00000133983_5end |
EntrezGene: | 224997 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.95e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.95e-17 | 23 |
neuron | 7.07e-11 | 33 |
neuronal stem cell | 7.07e-11 | 33 |
neuroblast | 7.07e-11 | 33 |
electrically signaling cell | 7.07e-11 | 33 |
electrically responsive cell | 1.10e-08 | 39 |
electrically active cell | 1.10e-08 | 39 |
neuron of the ventral spinal cord | 1.08e-07 | 3 |
neural cell | 1.43e-07 | 43 |
ectodermal cell | 2.53e-07 | 44 |
neurectodermal cell | 2.53e-07 | 44 |