FFCP PHASE1:Hg19::chr5:167181917..167181979,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57451 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29943 | |||
|TSSclassifier=strong | |||
|UniProt=G3V106 | |||
|association_with_transcript=0bp_to_ENST00000519204_5end | |||
|coexpression_cluster_id=C1955 | |||
|description=CAGE_peak_1_at_ODZ2_5end | |||
|id=chr5:167181917..167181979,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.68e-14!180;CL:0000057!1.43e-13!75;CL:0002620!5.50e-12!23;CL:0000077!1.54e-07!19;CL:0000221!4.57e-07!71;CL:0000220!8.42e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.93e-16;23!CL:0000077;8.32e-08;19!CL:0000057;2.03e-07;73!CL:0002559;2.35e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.39e-16,23;CL:0000057,3.51e-14,76;CL:0000062,4.27e-08,11;CL:0000375,4.27e-08,11;CL:0000335,4.27e-08,11;CL:0000221,6.27e-08,72;CL:0000077,8.05e-08,19;CL:0002559,2.40e-07,5;CL:0000076,9.89e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000335;4.32e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.36e-08;5!DOID:450;2.36e-08;5!DOID:66;2.36e-08;5!DOID:423;2.36e-08;5!DOID:0080000;2.36e-08;5!DOID:11722;2.36e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.37e-08,5;DOID:450,2.37e-08,5;DOID:66,2.37e-08,5;DOID:423,2.37e-08,5;DOID:0080000,2.37e-08,5;DOID:11722,2.37e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000033!4.78e-17!123;UBERON:0000475!2.48e-15!365;UBERON:0000153!4.14e-15!129;UBERON:0007811!4.14e-15!129;UBERON:0000924!1.12e-13!173;UBERON:0006601!1.12e-13!173;UBERON:0002097!2.82e-13!40;UBERON:0004121!2.26e-12!169;UBERON:0002346!2.23e-11!90;UBERON:0002199!1.53e-10!45;UBERON:0002416!1.53e-10!45;UBERON:0000955!2.23e-10!69;UBERON:0006238!2.23e-10!69;UBERON:0003102!5.69e-10!95;UBERON:0003075!5.79e-10!86;UBERON:0007284!5.79e-10!86;UBERON:0002616!5.34e-09!59;UBERON:0001017!5.91e-09!82;UBERON:0005743!2.56e-08!86;UBERON:0003056!3.65e-08!61;UBERON:0000073!5.20e-08!94;UBERON:0001016!5.20e-08!94;UBERON:0001869!1.74e-07!32;UBERON:0001049!2.08e-07!57;UBERON:0005068!2.08e-07!57;UBERON:0006241!2.08e-07!57;UBERON:0007135!2.08e-07!57;UBERON:0002020!3.09e-07!34;UBERON:0003528!3.09e-07!34;UBERON:0000064!6.79e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.83e-15;41!UBERON:0003102;1.25e-11;50!UBERON:0002199;2.01e-11;46!UBERON:0002416;2.01e-11;46!UBERON:0010371;1.11e-10;31!UBERON:0001801;1.52e-08;14!UBERON:0002073;2.35e-07;5!UBERON:0007625;2.57e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.25e-20,41;UBERON:0002199,4.58e-17,46;UBERON:0002416,4.58e-17,46;UBERON:0003102,4.85e-15,99;UBERON:0005085,1.24e-08,31;UBERON:0001801,1.49e-08,14;UBERON:0002073,2.40e-07,5;UBERON:0005086,2.40e-07,5;UBERON:0007625,2.55e-07,11;UBERON:0004121,3.12e-07,171;UBERON:0000924,3.12e-07,171;UBERON:0006601,3.12e-07,171;UBERON:0000033,4.73e-07,56;UBERON:0001444,4.78e-07,49 | |||
|phase1_expression=0.363356758541113,1.92690471501885,0.845726424575827,5.00366491765652,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,62.0530132707011,33.048111981569,55.4814857016215,1.71741592278634,3.01123735160345,0.251085279189606,0,0,0,0,0,0,1.83884244895785,2.71085326900425,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06014813338393,28.5762609062457,3.62116297402059,3.1811437882044,1.94653948121054,66.836115734996,36.8070799787856,32.6745402778429,0.392937226493138,34.6080523877915,32.9998154078142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15797509499322,0,0.25326102332916,1.32409180813219,0,2.83734705758686,1.12135520028461,1.06748995729705,3.94668077467456,0,0,0,10.1409476522104,4.03323147135999,0.937285727335186,0,0,0.597794722207204,3.05329696473789,2.5899671098901,3.37081936085396,0,0.122834317311768,0,7.12801714369232,5.68713937340681,0,0,0,0,0.554128230968366,18.876037697876,12.5659996277598,2.55404700141215,0.567160915800105,389.993067987586,157.178238170466,92.1903770044094,175.253200113291,94.9113794286022,148.400951066282,51.1821354911872,271.89867124068,71.9085098089646,241.074254403129,121.782015903762,1.2931684545505,382.345331140394,89.4678632261446,19.1603469310851,5.21804303540901,29.4565810238101,9.17774705244812,0,0,0,0.10366105501537,0,0,64.1443082552245,56.6052025609739,22.1015874163969,32.9701228902705,18.7688665234092,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,74.117294048963,11.7432805387229,0,0,6.29601427078001,0,0,17.3197610430328,10.6655972577071,63.6355122758153,0,0,0,0,0,0,0,0,0,118.259418251997,23.2511159477514,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.411309970813294,0,0,0.448524337381443,0,0.66004457238855,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,66.0152235760494,19.1737360892065,106.671181591255,0,0,0,0,0,1.42636905040718,1.15825045334063,0.205476322550383,7.34149949283572,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.713715955188647,0,0,7.22270639346525,0,0,3.32112799267718,3.87175253937577,1.12948698808508,0.195801157462741,0,0,0,0,0,0,0,1.73675465473144,52.1770709179412,10.1037633995906,1.28139149255701,15.3512174720011,0.482561763430822,0,0,0,0.410635780069046,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0,0,0,0.863663664408557,0,0.541892875087706,2.50844886927427,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,14.92582276539,10.3136874900735,7.46545199395024,1.30012049207304,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0,0,0.852266274161009,0.0890320356467374,16.6937764514588,14.414255052383,12.5060458244692,0.809262246844399,0,1.25924938732256,0,0,0.532306030317022,0,0,0,1.116475108079,0.632758849437452,0.762520775695299,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,1.44333169088268,3.35151137767894,1.08890984861323,0,6.45758059006845,6.73885902670502,4.87773168890343,2.98640420269047,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.703347082052564,9.90647474703862,0,0,0,0,0,54.1001330436399,0,4.3545542272653,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,2.33283690706603,0.347249989866585,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0.658156191461918,0,0.139423744278603,0.153900517007594,111.093504450826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,6.66348302417768,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,57.4205664269886,3.57686301065381,1.13959432720582,0,0.801588202515337,0,3.39676336289621,0,0,0,0,0.248505071130865,0,19.8420140867476,20.1883493382803,1.52997326454483,2.60055530911367,0.600420288709789,0,0,3.86788897277961,0,0,0,0,0,0,0,0,13.3310956910689,0,0,0,0,0,0,3.97614844904652,0.681017030557878,0,0,0,0,0,4.13096985274568,17.7780384427611,1.10327990218877,5.29791340163481,0,0,0,0,0,81.3659320495199,0,0,0,46.6947747093701,0,51.1164065356265,0.113312091520126,0,0,0.129282956361551,1.05786081394152,0,0,0,0,0,0,0,0,8.29843635101236,0,0,0,0,0,0,1.83039397352945,1.251909307065,0,0.110929051536852,0.496771223531068,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0.453692771289717,0,0.147855149989634,1.75226443880073,0,6.52104418880289,0,3.45594228925393,12.5218814834816,30.0515217994437,109.291095892444,8.13741466409323,0,9.88177124790894,0,5.17524655308201,0,0.343395705182793,0.336749488765919,1.26184898228651,5.20073542099719,1.50109113962448,151.898677923753,17.0029444134204,3.47283711485751,0,0.71635536432595,129.696607807608,9.64849818146311,85.3408574918606,67.7128274330911,0.337884881306145,0,0.34543034173119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| |||
|short_description=p1@ODZ2 | |||
}} |
Revision as of 08:53, 22 January 2014
Short description: | p1@ODZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ODZ2_5end |
Coexpression cluster: | C1955_Fibroblast_osteoclastoma_Mallassezderived_mesothelioma_pagetoid_mesenchymal_Mesothelial |
Association with transcript: | 0bp_to_ENST00000519204_5end |
EntrezGene: | ODZ2 |
HGNC: | 29943 |
UniProt: | G3V106 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.39e-16 | 23 |
fibroblast | 3.51e-14 | 76 |
osteoblast | 4.27e-08 | 11 |
osteoprogenitor cell | 4.27e-08 | 11 |
mesenchyme condensation cell | 4.27e-08 | 11 |
ectodermal cell | 6.27e-08 | 72 |
mesothelial cell | 8.05e-08 | 19 |
hair follicle cell | 2.40e-07 | 5 |
squamous epithelial cell | 9.89e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.25e-20 | 41 |
integument | 4.58e-17 | 46 |
integumental system | 4.58e-17 | 46 |
surface structure | 4.85e-15 | 99 |
ectodermal placode | 1.24e-08 | 31 |
anterior segment of eyeball | 1.49e-08 | 14 |
hair follicle | 2.40e-07 | 5 |
hair follicle placode | 2.40e-07 | 5 |
pigment epithelium of eye | 2.55e-07 | 11 |
ectoderm-derived structure | 3.12e-07 | 171 |
ectoderm | 3.12e-07 | 171 |
presumptive ectoderm | 3.12e-07 | 171 |
head | 4.73e-07 | 56 |
subdivision of head | 4.78e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.37e-08 | 5 |
myotonic disease | 2.37e-08 | 5 |
muscle tissue disease | 2.37e-08 | 5 |
myopathy | 2.37e-08 | 5 |
muscular disease | 2.37e-08 | 5 |
myotonic dystrophy | 2.37e-08 | 5 |