FFCP PHASE1:Mm9::chr17:34376649..34376663,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=48|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:34376649..34376663,-|id=chr17:34376649..34376663,-|ontology_enrichment_celltype=CL:0000553!1.12e-16!6;CL:0000556!1.12e-16!6;CL:0002031!2.14e-11!25;CL:0000050!4.91e-11!9;CL:0000988!1.62e-10!32;CL:0002032!1.62e-10!32;CL:0000037!1.62e-10!32;CL:0000566!1.62e-10!32;CL:0000837!1.62e-10!32;CL:0000414!5.61e-09!11;CL:0000839!1.50e-07!13;CL:0000049!6.37e-07!19;CL:0002320!8.47e-07!46;CL:0000134!8.47e-07!46|ontology_enrichment_celltype_v019_2=CL:0000553,8.48e-27,6;CL:0000556,8.48e-27,6;CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0000050,3.44e-18,9;CL:0000839,7.26e-13,13;CL:0002031,7.02e-12,25;CL:0000763,1.31e-10,16;CL:0000988,2.00e-09,32;CL:0002032,2.00e-09,32;CL:0000037,2.00e-09,32;CL:0000837,2.00e-09,32;CL:0000049,4.68e-09,19;CL:0002320,9.87e-07,46;CL:0000134,9.87e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!8.47e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.59e-18,1;UBERON:0001097,2.59e-18,1;UBERON:0003968,2.59e-18,1;UBERON:0001467,2.59e-18,1;UBERON:0002371,1.31e-10,16;UBERON:0001474,6.36e-08,22;UBERON:0004765,6.36e-08,22;UBERON:0001434,6.36e-08,22;UBERON:0002465,5.46e-07,3;UBERON:0002384,9.87e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,4.73193248037357,4.9361196098066,5.51706547337439,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2280433331755,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0,0.339956859987711,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr17:34376649..34376663,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:34376649..34376663,- | |||
|description=CAGE_peak_at_chr17:34376649..34376663,- | |||
|id=chr17:34376649..34376663,- | |||
|ontology_enrichment_celltype=CL:0000553!1.12e-16!6;CL:0000556!1.12e-16!6;CL:0002031!2.14e-11!25;CL:0000050!4.91e-11!9;CL:0000988!1.62e-10!32;CL:0002032!1.62e-10!32;CL:0000037!1.62e-10!32;CL:0000566!1.62e-10!32;CL:0000837!1.62e-10!32;CL:0000414!5.61e-09!11;CL:0000839!1.50e-07!13;CL:0000049!6.37e-07!19;CL:0002320!8.47e-07!46;CL:0000134!8.47e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.48e-27,6;CL:0000556,8.48e-27,6;CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0000050,3.44e-18,9;CL:0000839,7.26e-13,13;CL:0002031,7.02e-12,25;CL:0000763,1.31e-10,16;CL:0000988,2.00e-09,32;CL:0002032,2.00e-09,32;CL:0000037,2.00e-09,32;CL:0000837,2.00e-09,32;CL:0000049,4.68e-09,19;CL:0002320,9.87e-07,46;CL:0000134,9.87e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.47e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.59e-18,1;UBERON:0001097,2.59e-18,1;UBERON:0003968,2.59e-18,1;UBERON:0001467,2.59e-18,1;UBERON:0002371,1.31e-10,16;UBERON:0001474,6.36e-08,22;UBERON:0004765,6.36e-08,22;UBERON:0001434,6.36e-08,22;UBERON:0002465,5.46e-07,3;UBERON:0002384,9.87e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,4.73193248037357,4.9361196098066,5.51706547337439,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2280433331755,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0,0.339956859987711,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr17:34376649..34376663,- | |||
}} |
Latest revision as of 16:54, 4 August 2015
Short description: | p@chr17:34376649..34376663, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34376649..34376663, - |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.48e-27 | 6 |
megakaryocyte | 8.48e-27 | 6 |
lymphocyte of B lineage | 5.15e-19 | 1 |
B cell | 5.15e-19 | 1 |
pro-B cell | 5.15e-19 | 1 |
megakaryocyte-erythroid progenitor cell | 3.44e-18 | 9 |
myeloid lineage restricted progenitor cell | 7.26e-13 | 13 |
hematopoietic lineage restricted progenitor cell | 7.02e-12 | 25 |
myeloid cell | 1.31e-10 | 16 |
hematopoietic cell | 2.00e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.00e-09 | 32 |
hematopoietic stem cell | 2.00e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.00e-09 | 32 |
common myeloid progenitor | 4.68e-09 | 19 |
connective tissue cell | 9.87e-07 | 46 |
mesenchymal cell | 9.87e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.59e-18 | 1 |
axillary lymph node | 2.59e-18 | 1 |
peripheral lymph node | 2.59e-18 | 1 |
shoulder | 2.59e-18 | 1 |
bone marrow | 1.31e-10 | 16 |
bone element | 6.36e-08 | 22 |
skeletal element | 6.36e-08 | 22 |
skeletal system | 6.36e-08 | 22 |
lymphoid system | 5.46e-07 | 3 |
connective tissue | 9.87e-07 | 46 |