FFCP PHASE1:Mm9::chr17:31702626..31702636,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:31702626..31702636,-|id=chr17:31702626..31702636,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000815,5.15e-19,1;CL:0000792,5.15e-19,1;CL:0000213,7.74e-19,1;CL:0002078,7.74e-19,1;CL:0000115,7.74e-19,1;CL:0002262,7.74e-19,1;CL:1000398,7.74e-19,1;CL:0000624,8.03e-10,8;CL:0000791,7.68e-09,9;CL:0000789,7.68e-09,9;CL:0002420,7.68e-09,9;CL:0002419,7.68e-09,9;CL:0000790,7.68e-09,9;CL:0000084,2.08e-07,11;CL:0000827,2.08e-07,11;CL:0000215,3.64e-07,3;CL:0002293,4.77e-07,3;CL:0000838,7.23e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.74e-19,1;UBERON:0001281,7.74e-19,1;UBERON:0000353,7.74e-19,1;UBERON:0003497,7.74e-19,1;UBERON:0003909,7.74e-19,1;UBERON:0003928,7.74e-19,1;UBERON:0003835,7.74e-19,1;UBERON:0003513,7.74e-19,1;UBERON:0001280,7.74e-19,1;UBERON:0004647,7.74e-19,1;UBERON:0002294,7.74e-19,1;UBERON:0001173,7.74e-19,1;UBERON:0004912,7.74e-19,1;UBERON:0005171,7.74e-19,1;UBERON:0000077,1.37e-08,35;UBERON:0002370,1.53e-07,23;UBERON:0000974,1.53e-07,23;UBERON:0004807,1.53e-07,23;UBERON:0005058,1.53e-07,23;UBERON:0003351,1.53e-07,23;UBERON:0009113,1.53e-07,23;UBERON:0003295,1.53e-07,23;UBERON:0009722,1.53e-07,23;UBERON:0005562,1.53e-07,23;UBERON:0007690,1.53e-07,23;UBERON:0006562,2.94e-07,24;UBERON:0003408,2.94e-07,24;UBERON:0001557,2.94e-07,24;UBERON:0001042,2.94e-07,24;UBERON:0008814,2.94e-07,24;UBERON:0009145,2.94e-07,24|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,0,0,0,0.0797721589953364,0.856003649656029,1.39872643870396,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509235257325564,0.234690248288502,0,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0,0,0,1.01362607645082,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0.382576664137687,0,0|short_description=p@chr17:31702626..31702636,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:31702626..31702636,- | |||
|description=CAGE_peak_at_chr17:31702626..31702636,- | |||
|id=chr17:31702626..31702636,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.15e-19,1;CL:0000792,5.15e-19,1;CL:0000213,7.74e-19,1;CL:0002078,7.74e-19,1;CL:0000115,7.74e-19,1;CL:0002262,7.74e-19,1;CL:1000398,7.74e-19,1;CL:0000624,8.03e-10,8;CL:0000791,7.68e-09,9;CL:0000789,7.68e-09,9;CL:0002420,7.68e-09,9;CL:0002419,7.68e-09,9;CL:0000790,7.68e-09,9;CL:0000084,2.08e-07,11;CL:0000827,2.08e-07,11;CL:0000215,3.64e-07,3;CL:0002293,4.77e-07,3;CL:0000838,7.23e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.74e-19,1;UBERON:0001281,7.74e-19,1;UBERON:0000353,7.74e-19,1;UBERON:0003497,7.74e-19,1;UBERON:0003909,7.74e-19,1;UBERON:0003928,7.74e-19,1;UBERON:0003835,7.74e-19,1;UBERON:0003513,7.74e-19,1;UBERON:0001280,7.74e-19,1;UBERON:0004647,7.74e-19,1;UBERON:0002294,7.74e-19,1;UBERON:0001173,7.74e-19,1;UBERON:0004912,7.74e-19,1;UBERON:0005171,7.74e-19,1;UBERON:0000077,1.37e-08,35;UBERON:0002370,1.53e-07,23;UBERON:0000974,1.53e-07,23;UBERON:0004807,1.53e-07,23;UBERON:0005058,1.53e-07,23;UBERON:0003351,1.53e-07,23;UBERON:0009113,1.53e-07,23;UBERON:0003295,1.53e-07,23;UBERON:0009722,1.53e-07,23;UBERON:0005562,1.53e-07,23;UBERON:0007690,1.53e-07,23;UBERON:0006562,2.94e-07,24;UBERON:0003408,2.94e-07,24;UBERON:0001557,2.94e-07,24;UBERON:0001042,2.94e-07,24;UBERON:0008814,2.94e-07,24;UBERON:0009145,2.94e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,0,0,0,0.0797721589953364,0.856003649656029,1.39872643870396,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509235257325564,0.234690248288502,0,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0,0,0,1.01362607645082,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr17:31702626..31702636,- | |||
}} |
Latest revision as of 14:45, 4 August 2015
Short description: | p@chr17:31702626..31702636, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:31702626..31702636, - |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.15e-19 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.15e-19 | 1 |
lining cell | 7.74e-19 | 1 |
meso-epithelial cell | 7.74e-19 | 1 |
endothelial cell | 7.74e-19 | 1 |
endothelial cell of sinusoid | 7.74e-19 | 1 |
endothelial cell of hepatic sinusoid | 7.74e-19 | 1 |
CD4-positive, alpha-beta T cell | 8.03e-10 | 8 |
mature alpha-beta T cell | 7.68e-09 | 9 |
alpha-beta T cell | 7.68e-09 | 9 |
immature T cell | 7.68e-09 | 9 |
mature T cell | 7.68e-09 | 9 |
immature alpha-beta T cell | 7.68e-09 | 9 |
T cell | 2.08e-07 | 11 |
pro-T cell | 2.08e-07 | 11 |
barrier cell | 3.64e-07 | 3 |
epithelial cell of thymus | 4.77e-07 | 3 |
lymphoid lineage restricted progenitor cell | 7.23e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
bile duct | 7.74e-19 | 1 |
hepatic sinusoid | 7.74e-19 | 1 |
parenchyma | 7.74e-19 | 1 |
abdomen blood vessel | 7.74e-19 | 1 |
sinusoid | 7.74e-19 | 1 |
digestive system duct | 7.74e-19 | 1 |
abdominal segment blood vessel | 7.74e-19 | 1 |
trunk blood vessel | 7.74e-19 | 1 |
liver parenchyma | 7.74e-19 | 1 |
liver lobule | 7.74e-19 | 1 |
biliary system | 7.74e-19 | 1 |
biliary tree | 7.74e-19 | 1 |
biliary bud | 7.74e-19 | 1 |
hepatic duct | 7.74e-19 | 1 |
mixed endoderm/mesoderm-derived structure | 1.37e-08 | 35 |
thymus | 1.53e-07 | 23 |
neck | 1.53e-07 | 23 |
respiratory system epithelium | 1.53e-07 | 23 |
hemolymphoid system gland | 1.53e-07 | 23 |
pharyngeal epithelium | 1.53e-07 | 23 |
thymic region | 1.53e-07 | 23 |
pharyngeal gland | 1.53e-07 | 23 |
entire pharyngeal arch endoderm | 1.53e-07 | 23 |
thymus primordium | 1.53e-07 | 23 |
early pharyngeal endoderm | 1.53e-07 | 23 |
pharynx | 2.94e-07 | 24 |
gland of gut | 2.94e-07 | 24 |
upper respiratory tract | 2.94e-07 | 24 |
chordate pharynx | 2.94e-07 | 24 |
pharyngeal arch system | 2.94e-07 | 24 |
pharyngeal region of foregut | 2.94e-07 | 24 |