FFCP PHASE1:Hg19::chr5:146614679..146614697,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=202374 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28317 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z9H7 | |||
|association_with_transcript=0bp_to_ENST00000398523_5end | |||
|description=CAGE_peak_3_at_STK32A_5end | |||
|id=chr5:146614679..146614697,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.50e-08;10!CL:0000167;5.57e-07;1!CL:0000164;5.57e-07;1!CL:0000502;5.57e-07;1!CL:0000172;5.57e-07;1!CL:0000173;5.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.15e-08,10;CL:0000541,2.15e-08,10;CL:0000167,5.58e-07,1;CL:0000164,5.58e-07,1;CL:0000502,5.58e-07,1;CL:0000172,5.58e-07,1;CL:0000173,5.58e-07,1;CL:0002351,5.58e-07,1;CL:0002368,9.29e-07,13 | |||
|ontology_enrichment_development_v019=CL:0002351;5.57e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;3.67e-08;3!DOID:4430;5.57e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,3.43e-08,3;DOID:4430,5.58e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.38e-25!82;UBERON:0005743!3.30e-25!86;UBERON:0001049!5.47e-24!57;UBERON:0005068!5.47e-24!57;UBERON:0006241!5.47e-24!57;UBERON:0007135!5.47e-24!57;UBERON:0000073!1.63e-23!94;UBERON:0001016!1.63e-23!94;UBERON:0007023!2.93e-20!115;UBERON:0003075!5.29e-19!86;UBERON:0007284!5.29e-19!86;UBERON:0002616!2.44e-18!59;UBERON:0000955!5.09e-18!69;UBERON:0006238!5.09e-18!69;UBERON:0002346!1.50e-17!90;UBERON:0002780!9.32e-16!41;UBERON:0001890!9.32e-16!41;UBERON:0006240!9.32e-16!41;UBERON:0003080!3.39e-15!42;UBERON:0004121!1.16e-12!169;UBERON:0000924!5.39e-12!173;UBERON:0006601!5.39e-12!173;UBERON:0002020!3.20e-11!34;UBERON:0003528!3.20e-11!34;UBERON:0001893!8.23e-11!34;UBERON:0003076!1.90e-10!15;UBERON:0003057!1.90e-10!15;UBERON:0002791!3.64e-10!33;UBERON:0003056!6.29e-10!61;UBERON:0001869!3.07e-09!32;UBERON:0002298!6.40e-09!8;UBERON:0000033!2.01e-08!123;UBERON:0000025!3.59e-08!194;UBERON:0000153!4.67e-08!129;UBERON:0007811!4.67e-08!129;UBERON:0001894!2.59e-07!7;UBERON:0006222!2.59e-07!7;UBERON:0004733!2.60e-07!12;UBERON:0002028!2.60e-07!12;UBERON:0007277!2.60e-07!12;UBERON:0002308!5.21e-07!9;UBERON:0000125!5.21e-07!9;UBERON:0000483!6.07e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.82e-21;6!UBERON:0000988;5.57e-16;3!UBERON:0004733;7.77e-15;12!UBERON:0002028;7.77e-15;12!UBERON:0004732;1.19e-13;13!UBERON:0002148;2.40e-11;2!UBERON:0006331;2.40e-11;2!UBERON:0009662;2.40e-11;2!UBERON:0000007;5.22e-11;2!UBERON:0002680;3.06e-09;9!UBERON:0001895;3.06e-09;9!UBERON:0001896;7.63e-08;3!UBERON:0005290;7.63e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,3.22e-21,6;UBERON:0000988,1.04e-15,3;UBERON:0004733,7.61e-15,12;UBERON:0002028,7.61e-15,12;UBERON:0007277,7.61e-15,12;UBERON:0004732,1.16e-13,13;UBERON:0003076,9.15e-12,15;UBERON:0003057,9.15e-12,15;UBERON:0002148,3.84e-11,2;UBERON:0006331,3.84e-11,2;UBERON:0009662,3.84e-11,2;UBERON:0000007,5.80e-11,2;UBERON:0002680,3.65e-09,9;UBERON:0001895,3.65e-09,9;UBERON:0010092,3.65e-09,9;UBERON:0001896,5.60e-08,3;UBERON:0005290,5.60e-08,3;UBERON:0010096,5.60e-08,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,5.06599756336621,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,1.20645999155121,0,1.17217447210047,0,0.411309970813294,2.40274446275134,8.00314011365619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7950408664471,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,3.8015530533025,4.99694175149276,1.91419068741876,2.52894452138875,0,0,0,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0.86101074534246,0,0.443430153536676,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0.508507300585533,0,0.689486746482929,0,0,0,0.60298219312704,0,1.65868889896837,0.886642856860642,0.219385397153973,0,0.83654246567162,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,0,0,0.391329237864179,0,0,0,0,0.821425535170343,0,0,0,0,0.627865836814451,1.19472429772959,0,1.94144542218394,0,0,0,0,0,0,0,0,0,0,1.58186518546373,0,0,0.126621591911757,0,0,0.85381197895741,0.39961921916426,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.821432273351958,0,0,0,1.39641200636127,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0.803765742325096,0.825236619583403,1.66176135211674,0,0,0.242998226632099,0,1.33969702408637,1.52118305591495,2.74560874950457,0,3.07064315711112,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,2.6446520348538,0.171086837884329,0,0.747511887973863,0.471612915298998,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,1.72759505875258,0,0.244052529803926,0.625954653532499,0.573409195690071,1.88579387612649,2.67014532647949,0.138348634936231,1.24980407962107,5.00442087887438,0.856396000634902,0,1.40500471742064,0.434763085832475,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.782982875895635,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0.255788742607303,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.205116364240755,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0,0,0,0.127762427639595,0.535701835878287,0.672567444437648,1.21393120847326,1.59363533945908,0,0,0.171488009437418,1.2914249265598,0.131545547125698,0,0.444925607568277,0.156986185701028,0.314231179832004,0,0,0.431855182437243,0,10.0781927289085,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.487671699929078,0,0,0,0,2.57333409808316,0,0,0.33883824611688,0,1.66059127923341,0.0771741581079447,0.218559560503957,0,0,13.6692397318943,0.981542335574726,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0,0,0,0,0.378499274505237,2.73163929909239,0,0.101988829741982,3.20660886318673,0.275684698604535,0,0,0,0.829169439458779,0.517164979309476,0.213233981900981,0,0,0,0.224263725161227,1.0820016907288,0.404234377916439,0,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@STK32A | |||
}} |
Revision as of 08:07, 22 January 2014
Short description: | p3@STK32A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STK32A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398523_5end |
EntrezGene: | STK32A |
HGNC: | 28317 |
UniProt: | B7Z9H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.15e-08 | 10 |
melanoblast | 2.15e-08 | 10 |
peptide hormone secreting cell | 5.58e-07 | 1 |
enteroendocrine cell | 5.58e-07 | 1 |
type D enteroendocrine cell | 5.58e-07 | 1 |
somatostatin secreting cell | 5.58e-07 | 1 |
pancreatic D cell | 5.58e-07 | 1 |
progenitor cell of endocrine pancreas | 5.58e-07 | 1 |
respiratory epithelial cell | 9.29e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
brainstem | 3.22e-21 | 6 |
pons | 1.04e-15 | 3 |
segmental subdivision of hindbrain | 7.61e-15 | 12 |
hindbrain | 7.61e-15 | 12 |
presumptive hindbrain | 7.61e-15 | 12 |
segmental subdivision of nervous system | 1.16e-13 | 13 |
posterior neural tube | 9.15e-12 | 15 |
chordal neural plate | 9.15e-12 | 15 |
locus ceruleus | 3.84e-11 | 2 |
brainstem nucleus | 3.84e-11 | 2 |
hindbrain nucleus | 3.84e-11 | 2 |
pituitary gland | 5.80e-11 | 2 |
regional part of metencephalon | 3.65e-09 | 9 |
metencephalon | 3.65e-09 | 9 |
future metencephalon | 3.65e-09 | 9 |
medulla oblongata | 5.60e-08 | 3 |
myelencephalon | 5.60e-08 | 3 |
future myelencephalon | 5.60e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 3.43e-08 | 3 |
somatostatinoma | 5.58e-07 | 1 |