FFCP PHASE1:Hg19::chr5:140797296..140797305,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8714 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5F8 | |||
|association_with_transcript=14bp_to_uc003lkm.2,uc003lkn.1_5end | |||
|description=CAGE_peak_3_at_PCDHGB7_5end | |||
|id=chr5:140797296..140797305,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.48e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.08e-13;2!CL:0002575;3.08e-13;2!CL:0002549;1.48e-12;2!CL:0002602;3.22e-12;2!CL:0002319;1.87e-07;25!CL:0000669;4.99e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,3.28e-13,2;CL:0002549,1.52e-12,2;CL:0002602,3.62e-12,2;CL:0002319,1.88e-07,25;CL:0000047,2.03e-07,8;CL:0000669,5.15e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.41e-29!82;UBERON:0005743!2.66e-27!86;UBERON:0000073!3.83e-26!94;UBERON:0001016!3.83e-26!94;UBERON:0002616!4.50e-25!59;UBERON:0001049!7.07e-25!57;UBERON:0005068!7.07e-25!57;UBERON:0006241!7.07e-25!57;UBERON:0007135!7.07e-25!57;UBERON:0000955!9.03e-25!69;UBERON:0006238!9.03e-25!69;UBERON:0003075!1.70e-20!86;UBERON:0007284!1.70e-20!86;UBERON:0000033!2.64e-20!123;UBERON:0002346!7.04e-20!90;UBERON:0000153!1.12e-19!129;UBERON:0007811!1.12e-19!129;UBERON:0002780!4.79e-18!41;UBERON:0001890!4.79e-18!41;UBERON:0006240!4.79e-18!41;UBERON:0004121!6.70e-18!169;UBERON:0000924!1.05e-17!173;UBERON:0006601!1.05e-17!173;UBERON:0003080!2.48e-17!42;UBERON:0002020!2.78e-16!34;UBERON:0003528!2.78e-16!34;UBERON:0001893!2.96e-16!34;UBERON:0002791!5.57e-16!33;UBERON:0003056!1.25e-15!61;UBERON:0001869!8.47e-15!32;UBERON:0000956!3.64e-12!25;UBERON:0000203!3.64e-12!25;UBERON:0007023!6.92e-12!115;UBERON:0000475!1.09e-11!365;UBERON:0000477!3.00e-11!286;UBERON:0002619!4.11e-10!22;UBERON:0000025!3.16e-09!194;UBERON:0004111!4.49e-09!241;UBERON:0003076!8.13e-09!15;UBERON:0003057!8.13e-09!15;UBERON:0001950!1.28e-08!20;UBERON:0000119!3.18e-08!312;UBERON:0000468!7.28e-08!659;UBERON:0000483!8.43e-08!309;UBERON:0000481!8.73e-08!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.48e-12;2!UBERON:0005358;1.48e-12;2!UBERON:0001886;1.48e-12;2!UBERON:0004086;1.48e-12;2!UBERON:0005282;1.48e-12;2!UBERON:0005281;1.48e-12;2!UBERON:0006444;3.22e-12;2!UBERON:0001995;3.22e-12;2!UBERON:0004715;3.22e-12;2!UBERON:0004905;1.12e-11;8!UBERON:0000982;1.12e-11;8!UBERON:0004770;1.12e-11;8!UBERON:0011135;5.53e-11;5!UBERON:0002216;5.53e-11;5!UBERON:0011134;5.53e-11;5!UBERON:0002209;5.53e-11;5!UBERON:0002213;5.53e-11;5!UBERON:0007844;5.53e-11;5!UBERON:0011138;5.53e-11;5!UBERON:0001130;5.53e-11;5!UBERON:0001066;5.53e-11;5!UBERON:0001468;5.53e-11;5!UBERON:0005284;6.91e-11;5!UBERON:0006876;1.82e-08;11!UBERON:0002418;1.95e-08;3!UBERON:0004755;1.95e-08;3!UBERON:0001016;4.33e-07;83!UBERON:0002581;6.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-14,81;UBERON:0001016,1.25e-12,89;UBERON:0005629,1.52e-12,2;UBERON:0005358,1.52e-12,2;UBERON:0001886,1.52e-12,2;UBERON:0004086,1.52e-12,2;UBERON:0005282,1.52e-12,2;UBERON:0005281,1.52e-12,2;UBERON:0006444,3.62e-12,2;UBERON:0001995,3.62e-12,2;UBERON:0004715,3.62e-12,2;UBERON:0004905,1.22e-11,8;UBERON:0000982,1.22e-11,8;UBERON:0004770,1.22e-11,8;UBERON:0011135,6.36e-11,5;UBERON:0002216,6.36e-11,5;UBERON:0011134,6.36e-11,5;UBERON:0002209,6.36e-11,5;UBERON:0002213,6.36e-11,5;UBERON:0005856,6.36e-11,5;UBERON:0005866,6.36e-11,5;UBERON:0005863,6.36e-11,5;UBERON:0007844,6.36e-11,5;UBERON:0011138,6.36e-11,5;UBERON:0001130,6.36e-11,5;UBERON:0001066,6.36e-11,5;UBERON:0001468,6.36e-11,5;UBERON:0005284,7.80e-11,5;UBERON:0000955,2.48e-09,68;UBERON:0006238,2.48e-09,68;UBERON:0002418,2.11e-08,3;UBERON:0004755,2.11e-08,3;UBERON:0006876,2.29e-08,11;UBERON:0004121,7.22e-08,171;UBERON:0000924,7.22e-08,171;UBERON:0006601,7.22e-08,171;UBERON:0002581,9.18e-07,1;UBERON:0011216,9.33e-07,223 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,1.11389717664042,1.32558950291166,0.672325146451775,0,0,0,0.738726348460727,0,2.19418305034661,0.572471974262113,0.410623275218653,0.87879847716362,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,2.00535164254356,0.724232594804119,0.795285947051099,1.94653948121054,0.189069634328136,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0.622422070799533,0,0.326923806226917,2.27036141467397,1.15235184896,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.408308342509787,0.122834317311768,0.516628905878827,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0.427114777637135,0.423863802319124,0.900273288253207,0.515262646192195,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0,0.484938170456436,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,1.44331342025273,0.115930404975077,0.117408694235822,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0.897048674762886,0,0.22001485746285,0,0,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.285955987316295,1.08524321078289,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,3.04913549066956,3.90419561572865,0.773288812777695,3.68535783735567,0,0,0,0,3.0672872929785,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0,0,0.902838299183157,2.27407504055985,0,0,0.737476674166813,0.434418072340414,3.52442083432933,3.43143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0.211103257785751,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.48335359146061,0,0,0,0,0.145016693914229,0,0.979352392114111,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,1.116475108079,0.632758849437452,0,0.255897791311334,0.855877976067841,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,1.26664581178598,0,0,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.26602474769461,0.556543525114529,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.964771509003264,0,0.774054819518572,0.295547618953547,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.741412462787447,0,0.702793337176017,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.951329442515298,1.15063130943567,0,4.04530825862126,0,0.273810757783986,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.0607495566580247,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0.146552233678082,0,0.387848869084652,0.26446520348538,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.122026264901963,0.3755727921195,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0.932623203496683,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,0,0.400027764663154,0,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,1.85903646388503,0,0,0,0,0.352675943690684,0,0.256916900385838,0,0.159633859057151,0.615349092722265,1.00828678488687,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0.380494861163441,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0.203909198930495,1.05236437700559,0,0,0,0.314231179832004,0,0,0,0,0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| |||
|short_description=p3@PCDHGB7 | |||
}} |
Revision as of 07:54, 22 January 2014
Short description: | p3@PCDHGB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCDHGB7_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_uc003lkm.2, uc003lkn.1_5end |
EntrezGene: | PCDHGB7 |
HGNC: | 8714 |
UniProt: | Q9Y5F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 3.28e-13 | 2 |
fibroblast of choroid plexus | 1.52e-12 | 2 |
annulus pulposus cell | 3.62e-12 | 2 |
neural cell | 1.88e-07 | 25 |
neuronal stem cell | 2.03e-07 | 8 |
pericyte cell | 5.15e-07 | 4 |