FFCP PHASE1:Hg19::chr5:121412855..121412875,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6664 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000513319,uc010jcr.2_5end | |||
|coexpression_cluster_id=C4452 | |||
|description=CAGE_peak_8_at_LOX_5end | |||
|id=chr5:121412855..121412875,- | |||
|ontology_enrichment_celltype=CL:0000055!3.67e-45!180;CL:0000057!5.02e-26!75;CL:0000222!5.49e-23!119;CL:0000144!3.63e-19!625;CL:0002371!3.82e-17!591;CL:0000012!4.58e-16!682;CL:0000548!8.01e-16!679;CL:0000004!8.01e-16!679;CL:0000255!8.01e-16!679;CL:0000680!1.96e-15!57;CL:0000056!1.96e-15!57;CL:0000355!1.96e-15!57;CL:0000220!2.90e-15!246;CL:0002321!5.87e-15!248;CL:0000187!3.21e-14!54;CL:0000183!1.58e-13!59;CL:0000192!1.14e-12!42;CL:0000514!1.14e-12!42;CL:0000393!3.43e-12!60;CL:0000211!3.43e-12!60;CL:0000359!8.27e-11!32;CL:0002620!1.12e-10!23;CL:0000003!1.59e-08!722;CL:0000213!5.69e-08!57;CL:0000215!5.69e-08!57;CL:0002139!6.08e-08!24;CL:0000048!8.40e-08!430;CL:0000723!3.10e-07!436;CL:0000034!7.30e-07!444;CL:0002334!8.07e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000057;8.01e-13;73!CL:0002620;4.89e-12;23!CL:0000359;2.69e-11;32!CL:0000192;5.96e-10;43!CL:0002320;6.50e-09;188!CL:0000187;8.56e-09;55!CL:0002334;6.62e-08;12!CL:0002139;1.06e-07;24!CL:0000393;3.24e-07;61!CL:0000211;3.24e-07;61!CL:0000134;4.11e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.71e-32,76;CL:0000222,2.14e-22,121;CL:0000680,5.55e-18,58;CL:0000056,5.55e-18,58;CL:0000355,5.55e-18,58;CL:0000048,9.98e-17,427;CL:0000187,1.64e-16,55;CL:0000723,1.07e-15,433;CL:0000034,4.88e-15,441;CL:0000192,3.28e-14,43;CL:0000514,3.28e-14,43;CL:0000393,2.71e-13,61;CL:0000211,2.71e-13,61;CL:0002620,3.39e-12,23;CL:0000359,3.68e-12,32;CL:0002321,6.35e-11,250;CL:0002334,5.42e-08,12;CL:0002139,1.62e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;5.96e-10;43!CL:0000355;4.91e-09;58!CL:0000222;2.97e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.72e-19!79;UBERON:0007798!1.72e-19!79;UBERON:0000914!3.72e-18!83;UBERON:0002329!3.72e-18!83;UBERON:0003077!3.72e-18!83;UBERON:0003059!3.72e-18!83;UBERON:0007282!3.72e-18!83;UBERON:0009618!3.72e-18!83;UBERON:0007285!3.72e-18!83;UBERON:0004872!3.88e-17!84;UBERON:0004290!2.75e-16!70;UBERON:0004535!6.40e-16!110;UBERON:0000055!1.30e-15!69;UBERON:0001009!1.29e-14!113;UBERON:0001981!5.79e-14!60;UBERON:0007500!5.79e-14!60;UBERON:0004537!5.79e-14!60;UBERON:0006965!5.79e-14!60;UBERON:0000486!6.26e-14!82;UBERON:0001134!1.66e-13!61;UBERON:0002036!1.66e-13!61;UBERON:0003082!1.66e-13!61;UBERON:0000490!4.08e-13!138;UBERON:0005256!4.72e-13!143;UBERON:0002385!8.09e-13!63;UBERON:0001015!8.09e-13!63;UBERON:0000383!8.09e-13!63;UBERON:0003914!1.22e-12!118;UBERON:0001637!1.79e-11!42;UBERON:0003509!1.79e-11!42;UBERON:0004572!1.79e-11!42;UBERON:0002100!6.48e-09!216;UBERON:0004573!1.13e-08!33;UBERON:0004571!1.13e-08!33;UBERON:0002199!5.97e-08!45;UBERON:0002416!5.97e-08!45;UBERON:0003102!6.08e-08!95;UBERON:0000475!4.51e-07!365;UBERON:0000119!4.98e-07!312;UBERON:0002097!9.96e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;1.08e-09;75!UBERON:0007798;1.08e-09;75!UBERON:0007500;2.43e-09;56!UBERON:0001981;2.43e-09;56!UBERON:0004537;2.43e-09;56!UBERON:0001637;8.04e-09;42!UBERON:0003509;8.04e-09;42!UBERON:0004572;8.04e-09;42!UBERON:0002384;8.48e-09;198!UBERON:0000055;2.20e-08;65!UBERON:0004573;7.82e-08;33!UBERON:0004571;7.82e-08;33!UBERON:0010260;5.21e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,3.23e-19,71;UBERON:0003059,3.23e-19,71;UBERON:0007282,3.23e-19,71;UBERON:0004290,3.23e-19,71;UBERON:0009618,3.23e-19,71;UBERON:0002049,3.38e-19,78;UBERON:0007798,3.38e-19,78;UBERON:0007524,9.60e-19,73;UBERON:0003077,1.16e-18,72;UBERON:0007285,1.16e-18,72;UBERON:0007503,8.17e-18,78;UBERON:0000490,2.38e-16,148;UBERON:0000055,9.99e-16,68;UBERON:0004535,1.03e-15,109;UBERON:0001134,1.12e-15,62;UBERON:0002036,1.12e-15,62;UBERON:0003082,1.12e-15,62;UBERON:0000486,1.91e-15,83;UBERON:0004872,3.72e-15,83;UBERON:0001009,1.17e-14,112;UBERON:0002385,1.19e-14,64;UBERON:0001015,1.19e-14,64;UBERON:0000383,1.19e-14,64;UBERON:0007500,4.89e-14,59;UBERON:0001981,4.89e-14,59;UBERON:0004537,4.89e-14,59;UBERON:0006965,4.89e-14,59;UBERON:0001637,6.24e-12,42;UBERON:0003509,6.24e-12,42;UBERON:0004572,6.24e-12,42;UBERON:0005256,6.73e-11,122;UBERON:0003104,3.73e-10,160;UBERON:0009142,3.73e-10,160;UBERON:0003914,1.42e-09,117;UBERON:0004573,1.30e-08,33;UBERON:0004571,1.30e-08,33;UBERON:0002199,1.93e-08,46;UBERON:0002416,1.93e-08,46;UBERON:0000926,4.03e-08,315;UBERON:0004120,4.03e-08,315;UBERON:0006603,4.03e-08,315;UBERON:0003102,1.97e-07,99;UBERON:0002097,2.14e-07,41;UBERON:0010260,6.71e-07,9 | |||
|phase1_expression=5.08699461957559,4.06790995392868,4.51054093107108,5.00366491765652,4.02264984984559,3.48935409640147,5.06599756336621,2.52687949370732,0.522371256399677,1.72013755551056,0.697801167972428,0.655324116390517,1.84636884759917,2.22779435328084,3.31397375727916,3.36162573225888,2.41077811209591,2.19093027116212,1.95173119516203,1.96993692922861,2.44800829493104,1.88072832886853,0.572471974262113,1.50561867580173,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,5.11450247374121,3.61439152384566,6.01605492763067,3.76600949298142,6.36228757640879,6.8128881842369,3.30871860074237,3.54767035940102,3.42555664203192,0.130979075497713,0,0,0,0,0,0,0,0,2.78267370313387,2.58070378531837,2.08284300964557,1.13061588384802,2.09749718104953,1.37559020970034,2.29894463190492,6.97725249757188,3.5576626268671,6.6944122552934,4.43112248820062,9.12326526862215,7.32186172644509,2.20597848207521,0.81014194788176,4.19708722935175,2.91888184414021,4.27923625836624,4.5994991239765,0.949265659568129,1.46561395144326,0,0,0.436094052142534,6.95760732373446,6.71141711822273,4.10468460520978,2.86836620748814,2.4826786753885,2.24271040056923,7.47242970107935,4.44001587150888,6.22422070799533,4.71487352243908,2.28846664358842,3.17850598054356,3.45705554687999,3.28050004567315,3.74592092196385,3.4228309292667,4.18456305545043,5.40198693761318,5.50368010851647,6.88208952841018,3.87892925384297,3.0708579327942,3.30642499762449,2.37600571456411,6.67620709052104,1.82032272387605,2.15585442544872,1.34668891163253,2.62748891731125,5.81834642516784,7.02364193409341,7.66219489497549,7.21142682751665,5.89847352432109,4.66413052791041,7.68806599746843,2.96704661623387,2.40072876867522,5.77094163735258,4.89517026086695,7.81690796592677,5.73839529620305,8.18470843354068,4.03894038790583,5.43094401989566,1.61646056818812,2.84007674013291,7.35490317061774,3.05209066158878,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0,0,2.57296375277154,5.52539685409922,10.2160944167035,4.33127689001751,0.236613600079688,0,0,0.110293972732394,0,0,0.404493924480493,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,0,0.245976877086227,3.77449182656756,0.109750285408626,0,0,0.277765335475589,1.95484983186195,2.07986957055916,7.21656710126366,1.39116485970092,14.4412693910061,2.16549671641611,0.462985512576611,3.23432058798817,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.53735113621709,0.290633938513962,2.68367875415648,0,0,0,0,0.12624243342638,0.317489471460845,2.67391897890794,0,3.4214489204541,2.77634230298973,2.40274446275134,1.42913216315289,3.92458795208763,0.87192013766656,7.1871520104531,12.4100847127467,0,5.071816515336,8.51001973071586,5.2003718455683,1.02882949704857,2.83698264046557,1.0656887160644,5.14720777169331,1.62786481617433,3.29296134712308,3.58309802723109,4.97548728239564,3.95975936466715,5.42590878707255,4.35766729300147,4.09889263846434,0,0,0,8.14724508671381,5.7430967917057,0,4.1986578933598,3.49309748335652,4.47652408099739,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,2.4538298343828,4.50153468953709,3.7977103317963,4.78332981520856,5.88815663030634,6.15039418632345,6.09135357962109,7.82459859292069,2.27407504055985,4.1389228517002,7.97070718242524,7.00602840458472,4.51794795234031,0.391602314925481,0,0.206768026122887,0,0,0,3.32870879020994,0.907170879989041,8.93188108147597,6.75232682467475,10.1037633995906,5.38184426873944,12.2809739776009,6.91671860917512,1.48418066444991,2.92998418225046,4.08391968220192,3.6135948646076,1.03850885836724,3.95115286763861,0,1.40354529212299,0,3.4444334449382,4.91646153618136,2.88473712910733,0,2.38747545023686,0.784349769176855,0,4.22206515571503,0,0.680374821106063,3.88648648983851,1.54227252690289,1.08378575017541,0.501689773854853,0,0.831076008928724,0.671624264166535,0,0,1.53870075069834,0.656029291399411,4.55529752530024,0.103041011647722,0.54941678891006,0.247528499761764,0,0,6.42735719376638,1.83674364755032,1.54048617114644,1.38153307253517,2.34322173223702,5.80069322288678,3.19036726611303,2.47157219506693,2.67096106940212,1.32227932288782,0.768760269460425,0,0.4046311234222,5.11330104227014,1.88887408098384,3.485186350803,2.7723022215848,1.06461206063404,1.73986598415015,3.33583594387056,5.72499546967965,6.69885064847401,3.48017367190598,4.76575484809562,0.767693373934002,2.1396949401696,2.54562598340749,0.78494864019923,5.75591864266607,3.84351841630477,4.3590588867904,2.83055474202642,3.17020642346017,1.26377536871694,0,1.46228093778771,3.16950440270266,2.32049849393576,4.10075752665767,1.13008116620243,1.65409603063837,1.99031692572366,3.5076070820301,1.73632660280006,3.27947376023316,6.08731130888112,4.02770547529675,3.3803472303869,7.17056761020257,10.1196512243515,6.4200789266625,2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| |||
|short_description=p8@LOX | |||
}} |
Revision as of 07:05, 22 January 2014
Short description: | p8@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LOX_5end |
Coexpression cluster: | C4452_Lens_Mesenchymal_osteoclastoma_Preadipocyte_basal_Fibroblast_epithelioid |
Association with transcript: | 0bp_to_ENST00000513319, uc010jcr.2_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.71e-32 | 76 |
mesodermal cell | 2.14e-22 | 121 |
muscle precursor cell | 5.55e-18 | 58 |
myoblast | 5.55e-18 | 58 |
multi-potent skeletal muscle stem cell | 5.55e-18 | 58 |
multi fate stem cell | 9.98e-17 | 427 |
muscle cell | 1.64e-16 | 55 |
somatic stem cell | 1.07e-15 | 433 |
stem cell | 4.88e-15 | 441 |
smooth muscle cell | 3.28e-14 | 43 |
smooth muscle myoblast | 3.28e-14 | 43 |
electrically responsive cell | 2.71e-13 | 61 |
electrically active cell | 2.71e-13 | 61 |
skin fibroblast | 3.39e-12 | 23 |
vascular associated smooth muscle cell | 3.68e-12 | 32 |
embryonic cell | 6.35e-11 | 250 |
preadipocyte | 5.42e-08 | 12 |
endothelial cell of vascular tree | 1.62e-07 | 24 |