FFCP PHASE1:Hg19::chr5:102201722..102201750,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5066 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |||
|TSSclassifier=strong | |||
|UniProt=P19021 | |||
|association_with_transcript=8bp_to_ENST00000304400_5end | |||
|description=CAGE_peak_5_at_PAM_5end | |||
|id=chr5:102201722..102201750,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.56e-19!180;CL:0000057!1.10e-15!75;CL:0002620!1.28e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.95e-12;23!CL:0002334;3.56e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.02e-16,76;CL:0002620,1.08e-11,23;CL:0002334,4.31e-07,12;CL:0000136,7.94e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.93e-14!115;UBERON:0000468!1.26e-11!659;UBERON:0000467!3.98e-10!625;UBERON:0000480!5.23e-10!626;UBERON:0002199!6.15e-08!45;UBERON:0002416!6.15e-08!45;UBERON:0000475!8.82e-08!365;UBERON:0004872!4.57e-07!84;UBERON:0007100!4.85e-07!27;UBERON:0002097!5.77e-07!40;UBERON:0004290!6.29e-07!70;UBERON:0001637!6.74e-07!42;UBERON:0003509!6.74e-07!42;UBERON:0004572!6.74e-07!42;UBERON:0004573!9.00e-07!33;UBERON:0004571!9.00e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.26e-07;25!UBERON:0002097;5.58e-07;41!UBERON:0002199;8.33e-07;46!UBERON:0002416;8.33e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.13e-14,114;UBERON:0002199,4.50e-10,46;UBERON:0002416,4.50e-10,46;UBERON:0002097,5.78e-09,41;UBERON:0007100,1.24e-07,27;UBERON:0007524,2.40e-07,73;UBERON:0003077,5.76e-07,72;UBERON:0007285,5.76e-07,72;UBERON:0002329,6.97e-07,71;UBERON:0003059,6.97e-07,71;UBERON:0007282,6.97e-07,71;UBERON:0004290,6.97e-07,71;UBERON:0009618,6.97e-07,71 | |||
|phase1_expression=14.8976271001856,6.42301571672949,9.16203626623813,7.00513088471913,12.9618717383913,3.48935409640147,2.53299878168311,6.31719873426831,4.44015567939725,0.491467873003018,0,0,0,1.8564952944007,2.31978163009541,11.4295274896802,4.82155622419182,10.2243412654232,13.6621183661342,0.492484232307152,0.408001382488506,0.313454721478088,1.43117993565528,1.64249310087461,0.502170558379211,0.0764134057479513,0,0.0787107813136792,0.786728553697808,1.53531759238885,2.16742572642506,0,0,0,0,0,0.293600439334847,1.66198622559563,2.60707781711184,2.17010870715852,0.671746422719773,0.32389366601898,0,0,1.88937971844405,0.485168122375632,0.464858073811369,2.87817521615278,0.929119112685311,0.28769239232215,2.30544635876191,1.41889337933151,0.344745680736619,7.74581620300591,4.06279459783025,0,2.45615535052061,1.12361742222542,0,6.41858054152187,4.47535988059329,0,1.39624560335142,0.426224750532694,0.290209238628584,2.26954089876456,2.4912889959823,0.502497330513487,4.69334626578181,1.95469960234605,1.21079900526674,2.57794345191295,2.84816148696796,0.845021145247767,0,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0.821127996921047,0.80642697289893,1.33720097891754,0.434473211648397,0,1.34140171940727,0.12786256184353,5.42158728576849,3.00802746381534,9.99440980829684,3.1811437882044,1.45990461090791,0.945348171640679,0.886917589850256,1.31752178539689,2.68507104770311,0,0,21.0955805875544,20.3731792640143,38.9566824320275,0,0,0.371457501329565,0.79504962946682,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,0.275118041940067,0.835979866147242,1.8089173141853,1.42306505074684,1.33888245105868,0,0,0.976248230192678,0.735326160691737,0.81014194788176,0.803697554556718,0.44905874525234,1.12611480483322,1.53316637465883,0,0.366403487860815,0,0,0,11.4303548889923,8.23098325819768,9.26864265692532,43.0254931123221,11.7040566125458,12.8955848032731,1.06748995729705,3.20667812942308,9.02512002659322,0.942974704487816,3.75962377160955,1.36221684880438,3.45705554687999,0.937285727335186,4.37024107562449,1.1409436430889,8.36912611090086,2.81842796745036,4.04682360920329,1.26405726032024,1.02077085627447,0.491337269247072,3.09977343527296,3.56400857184616,2.96720315134268,0,0,1.0100166837244,0.625592599359821,0.554128230968366,3.5118209670467,5.82326812018137,9.16452159330241,3.62982986112067,10.5839885056429,14.7354598284812,5.72216133130817,26.4080164554274,12.3663035086127,11.8514648420989,15.447699075522,21.2658178623995,16.5642908774038,12.1168211637175,9.48113956015683,13.0933306023238,42.9561606945103,8.96693674225998,10.1736355386293,0,0.818238361772504,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0.756962552626885,0,1.56449532329816,7.71889125831462,4.14404764057442,3.71494342425583,5.77503585335668,0.828147600278907,0.842923450390509,0.964044119533928,1.10293972732394,1.96091499683166,2.60997681022206,0.943819157121151,1.37355025587742,0.769494313892781,0.738155454624648,2.80483547606892,1.2347220339942,2.94017422771084,0,0,1.77236972004421,0,0.122988438543114,0.171567810298526,0,0,0,0,0,2.07986957055916,1.44331342025273,1.15930404975077,0.117408694235822,1.01056513432752,0.462985512576611,1.52203321787679,0,0,0.738651018262192,5.38209809820247,0.297262324577456,0,0,0,0.0895585227028483,0.290633938513962,0,0.985326475791887,0.352193736052904,2.28060927094849,1.58531948758658,1.76739406796932,21.2717945878766,22.5373171079384,38.6817575793155,3.4214489204541,5.55268460597947,3.60411669412701,13.1480159010066,0.672786506072164,2.61576041299968,0.95339771567235,2.58543431515556,3.57656445851882,0.845302752556,4.25500986535793,8.32059495290929,0.257207374262142,0,0,0.857867961948885,0.542621605391443,0.823240336780769,2.93162565864362,0.710783897485092,0,3.31583314765545,3.48613383440118,1.49959486773086,4.86495122564762,11.0496560115068,4.21667878966063,3.35474797688216,4.59447743336456,5.70547620162874,4.05387658669222,1.2328579353023,4.65558504423729,0,3.54655368363469,1.94064817373566,3.08023287071396,3.81141936333695,2.60279707715243,1.54657762555539,0.335032530668698,3.18969375826582,0,0,0.414415513436035,1.47229790062968,3.00102312635806,1.08506009479894,3.32753378449291,2.49800584316026,3.6271555457805,1.99140405487612,4.21324539618807,0,8.27784570340039,2.65690239414175,1.47495334833363,18.1586754238293,0.391602314925481,0.343143423810856,0.620304078368662,1.07857100409308,0.426910231213777,0,0,0.604780586659361,18.1118699707707,15.3461973288062,15.9976253826852,14.8641413136613,16.8863392192012,10.7772127166217,8.90508398669946,2.15893571323718,5.50441348470694,3.36721339656617,7.2695620085707,8.71577838449694,0.483437798366489,0.601519410909855,0.0920809889358963,1.60740227430449,2.00300284807389,2.22911505431021,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.647747748306418,0,0.541892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| |||
|short_description=p5@PAM | |||
}} |
Revision as of 06:44, 22 January 2014
Short description: | p5@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000304400_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | P19021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.02e-16 | 76 |
skin fibroblast | 1.08e-11 | 23 |
preadipocyte | 4.31e-07 | 12 |
fat cell | 7.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.13e-14 | 114 |
integument | 4.50e-10 | 46 |
integumental system | 4.50e-10 | 46 |
skin of body | 5.78e-09 | 41 |
primary circulatory organ | 1.24e-07 | 27 |
dense mesenchyme tissue | 2.40e-07 | 73 |
paraxial mesoderm | 5.76e-07 | 72 |
presumptive paraxial mesoderm | 5.76e-07 | 72 |
somite | 6.97e-07 | 71 |
presomitic mesoderm | 6.97e-07 | 71 |
presumptive segmental plate | 6.97e-07 | 71 |
dermomyotome | 6.97e-07 | 71 |
trunk paraxial mesoderm | 6.97e-07 | 71 |