FFCP PHASE1:Mm9::chr16:20535533..20535544,+: Difference between revisions
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{{FFCP|EntrezGene=11773|HGNC=|MCL_coexpression_id=13|UniProt=Q3TWV4|association_with_transcript=-6bp_to_ENSMUST00000090023_5end|description=CAGE_peak_2_at_Ap2m1_5end|id=chr16:20535533..20535544,+|ontology_enrichment_celltype=CL:0000117!1.52e-15!23;CL:0000337!1.52e-15!23;CL:0000540!6.84e-09!33;CL:0000047!6.84e-09!33;CL:0000031!6.84e-09!33;CL:0000404!6.84e-09!33;CL:0002319!3.66e-08!43;CL:0000221!4.23e-08!44;CL:0000133!4.23e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.30e-41,23;CL:0000337,4.30e-41,23;CL:0000540,7.41e-27,33;CL:0000047,7.41e-27,33;CL:0000031,7.41e-27,33;CL:0000404,7.41e-27,33;CL:0000393,7.92e-22,39;CL:0000211,7.92e-22,39;CL:0002319,4.54e-21,43;CL:0000221,1.87e-20,44;CL:0000133,1.87e-20,44;CL:0002609,1.69e-12,6;CL:0002321,1.11e-10,70;CL:0002610,1.20e-07,3;CL:0002614,1.78e-07,3;CL:0000120,1.87e-07,3;CL:0002613,2.90e-07,3;CL:0002608,3.19e-07,3;CL:0000723,5.45e-07,91;CL:0000048,5.45e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.83e-14!52;UBERON:0005068!6.83e-14!52;UBERON:0006241!6.83e-14!52;UBERON:0007135!6.83e-14!52;UBERON:0001017!5.17e-13!73;UBERON:0005743!5.17e-13!73;UBERON:0000955!5.49e-13!50;UBERON:0006238!5.49e-13!50;UBERON:0000073!8.21e-13!75;UBERON:0001016!8.21e-13!75;UBERON:0002616!1.20e-12!49;UBERON:0000033!2.77e-10!63;UBERON:0002346!3.04e-10!71;UBERON:0003075!3.04e-10!71;UBERON:0007284!3.04e-10!71;UBERON:0002020!4.54e-10!34;UBERON:0004121!7.25e-10!102;UBERON:0000924!7.25e-10!102;UBERON:0006601!7.25e-10!102;UBERON:0003080!2.12e-08!40;UBERON:0002780!6.49e-08!39;UBERON:0001890!6.49e-08!39;UBERON:0006240!6.49e-08!39;UBERON:0003056!8.11e-08!49;UBERON:0002791!1.08e-07!29;UBERON:0003528!1.08e-07!29;UBERON:0001893!1.08e-07!29;UBERON:0003076!4.01e-07!12;UBERON:0003057!4.01e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-29,54;UBERON:0001017,1.42e-28,73;UBERON:0001016,1.37e-27,75;UBERON:0001049,1.19e-25,52;UBERON:0005068,1.19e-25,52;UBERON:0006241,1.19e-25,52;UBERON:0007135,1.19e-25,52;UBERON:0002020,8.84e-23,34;UBERON:0004121,5.16e-20,95;UBERON:0000924,5.16e-20,95;UBERON:0006601,5.16e-20,95;UBERON:0002346,1.65e-19,64;UBERON:0003075,1.65e-19,64;UBERON:0007284,1.65e-19,64;UBERON:0002616,2.20e-19,46;UBERON:0000955,7.64e-19,47;UBERON:0006238,7.64e-19,47;UBERON:0003528,7.72e-18,29;UBERON:0002791,7.72e-18,29;UBERON:0001893,7.72e-18,29;UBERON:0003080,5.75e-17,40;UBERON:0002420,1.09e-16,8;UBERON:0007245,1.09e-16,8;UBERON:0010009,1.09e-16,8;UBERON:0010011,1.09e-16,8;UBERON:0000454,1.09e-16,8;UBERON:0010371,3.10e-16,73;UBERON:0002780,1.22e-15,39;UBERON:0001890,1.22e-15,39;UBERON:0006240,1.22e-15,39;UBERON:0003056,6.64e-13,49;UBERON:0010314,1.90e-11,92;UBERON:0000369,8.30e-11,5;UBERON:0002435,8.30e-11,5;UBERON:0000204,8.30e-11,5;UBERON:0010082,8.30e-11,5;UBERON:0003076,1.67e-09,12;UBERON:0003057,1.67e-09,12;UBERON:0002950,3.34e-09,4;UBERON:0001891,3.34e-09,4;UBERON:0009616,3.34e-09,4;UBERON:0010286,3.34e-09,4;UBERON:0000025,9.50e-09,114;UBERON:0002240,4.73e-08,6;UBERON:0005174,4.73e-08,6;UBERON:0001137,4.73e-08,6;UBERON:0004111,1.00e-07,122;UBERON:0004684,1.20e-07,3;UBERON:0002275,1.20e-07,3;UBERON:0001954,1.25e-07,7;UBERON:0003022,1.25e-07,7;UBERON:0002421,1.25e-07,7;UBERON:0000349,1.25e-07,7;UBERON:0002600,1.25e-07,7;UBERON:0002038,1.78e-07,3;UBERON:0009663,1.78e-07,3;UBERON:0009661,1.78e-07,3;UBERON:0000125,1.78e-07,3;UBERON:0002308,1.78e-07,3;UBERON:0011216,1.92e-07,194|phase1_expression=0,0.697950815278722,0.454999239389536,0.90739263392049,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0.174840804837995,0.333109761815663,0,0,0,0,0,0.255129870453209,0.297872853602656,0,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.760093677825496,1.26015064879965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.388859798148567,1.1198913730029,0,0,0,0,0.257259436035947,0,0.515672092277442,2.22548106945558,2.11596391708813,5.70448263155561,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,1.34796496001021,1.75507719831198,3.15487442027073,2.28520787523043,1.32521124570968,1.5923803897944,2.58782771749238,2.75765635983006,2.20231761998777,3.06449611404451,3.07213066512487,1.97829431595291,2.37867873366265,2.6045668527838,3.07101298901519,1.68828783009504,3.51435969886663,1.76777151284201,0.854230084794618,1.1183966749518,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0,0,0,0,0,0.519572009205738,0.70667914902068,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0.161766849947409,0,0,0,0.878342391034642,1.25668024088073,0.255457055208591,0.359445373517761,0,0.381210681219194,1.9472783122627,1.37250180845588,2.63874139437015,2.43354048269187,1.79000820131231,2.28566849015516,1.94689515681309,0.305518091550949,0.124406970610093,0,0,0.390361328888111,0.229902104433473,0.720248519221397,0,0.5442919932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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11773 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TWV4 | |||
|association_with_transcript=-6bp_to_ENSMUST00000090023_5end | |||
|cluster_id=chr16:20535533..20535544,+ | |||
|description=CAGE_peak_2_at_Ap2m1_5end | |||
|id=chr16:20535533..20535544,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.52e-15!23;CL:0000337!1.52e-15!23;CL:0000540!6.84e-09!33;CL:0000047!6.84e-09!33;CL:0000031!6.84e-09!33;CL:0000404!6.84e-09!33;CL:0002319!3.66e-08!43;CL:0000221!4.23e-08!44;CL:0000133!4.23e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.30e-41,23;CL:0000337,4.30e-41,23;CL:0000540,7.41e-27,33;CL:0000047,7.41e-27,33;CL:0000031,7.41e-27,33;CL:0000404,7.41e-27,33;CL:0000393,7.92e-22,39;CL:0000211,7.92e-22,39;CL:0002319,4.54e-21,43;CL:0000221,1.87e-20,44;CL:0000133,1.87e-20,44;CL:0002609,1.69e-12,6;CL:0002321,1.11e-10,70;CL:0002610,1.20e-07,3;CL:0002614,1.78e-07,3;CL:0000120,1.87e-07,3;CL:0002613,2.90e-07,3;CL:0002608,3.19e-07,3;CL:0000723,5.45e-07,91;CL:0000048,5.45e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.83e-14!52;UBERON:0005068!6.83e-14!52;UBERON:0006241!6.83e-14!52;UBERON:0007135!6.83e-14!52;UBERON:0001017!5.17e-13!73;UBERON:0005743!5.17e-13!73;UBERON:0000955!5.49e-13!50;UBERON:0006238!5.49e-13!50;UBERON:0000073!8.21e-13!75;UBERON:0001016!8.21e-13!75;UBERON:0002616!1.20e-12!49;UBERON:0000033!2.77e-10!63;UBERON:0002346!3.04e-10!71;UBERON:0003075!3.04e-10!71;UBERON:0007284!3.04e-10!71;UBERON:0002020!4.54e-10!34;UBERON:0004121!7.25e-10!102;UBERON:0000924!7.25e-10!102;UBERON:0006601!7.25e-10!102;UBERON:0003080!2.12e-08!40;UBERON:0002780!6.49e-08!39;UBERON:0001890!6.49e-08!39;UBERON:0006240!6.49e-08!39;UBERON:0003056!8.11e-08!49;UBERON:0002791!1.08e-07!29;UBERON:0003528!1.08e-07!29;UBERON:0001893!1.08e-07!29;UBERON:0003076!4.01e-07!12;UBERON:0003057!4.01e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-29,54;UBERON:0001017,1.42e-28,73;UBERON:0001016,1.37e-27,75;UBERON:0001049,1.19e-25,52;UBERON:0005068,1.19e-25,52;UBERON:0006241,1.19e-25,52;UBERON:0007135,1.19e-25,52;UBERON:0002020,8.84e-23,34;UBERON:0004121,5.16e-20,95;UBERON:0000924,5.16e-20,95;UBERON:0006601,5.16e-20,95;UBERON:0002346,1.65e-19,64;UBERON:0003075,1.65e-19,64;UBERON:0007284,1.65e-19,64;UBERON:0002616,2.20e-19,46;UBERON:0000955,7.64e-19,47;UBERON:0006238,7.64e-19,47;UBERON:0003528,7.72e-18,29;UBERON:0002791,7.72e-18,29;UBERON:0001893,7.72e-18,29;UBERON:0003080,5.75e-17,40;UBERON:0002420,1.09e-16,8;UBERON:0007245,1.09e-16,8;UBERON:0010009,1.09e-16,8;UBERON:0010011,1.09e-16,8;UBERON:0000454,1.09e-16,8;UBERON:0010371,3.10e-16,73;UBERON:0002780,1.22e-15,39;UBERON:0001890,1.22e-15,39;UBERON:0006240,1.22e-15,39;UBERON:0003056,6.64e-13,49;UBERON:0010314,1.90e-11,92;UBERON:0000369,8.30e-11,5;UBERON:0002435,8.30e-11,5;UBERON:0000204,8.30e-11,5;UBERON:0010082,8.30e-11,5;UBERON:0003076,1.67e-09,12;UBERON:0003057,1.67e-09,12;UBERON:0002950,3.34e-09,4;UBERON:0001891,3.34e-09,4;UBERON:0009616,3.34e-09,4;UBERON:0010286,3.34e-09,4;UBERON:0000025,9.50e-09,114;UBERON:0002240,4.73e-08,6;UBERON:0005174,4.73e-08,6;UBERON:0001137,4.73e-08,6;UBERON:0004111,1.00e-07,122;UBERON:0004684,1.20e-07,3;UBERON:0002275,1.20e-07,3;UBERON:0001954,1.25e-07,7;UBERON:0003022,1.25e-07,7;UBERON:0002421,1.25e-07,7;UBERON:0000349,1.25e-07,7;UBERON:0002600,1.25e-07,7;UBERON:0002038,1.78e-07,3;UBERON:0009663,1.78e-07,3;UBERON:0009661,1.78e-07,3;UBERON:0000125,1.78e-07,3;UBERON:0002308,1.78e-07,3;UBERON:0011216,1.92e-07,194 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0.90739263392049,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0.174840804837995,0.333109761815663,0,0,0,0,0,0.255129870453209,0.297872853602656,0,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.760093677825496,1.26015064879965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.388859798148567,1.1198913730029,0,0,0,0,0.257259436035947,0,0.515672092277442,2.22548106945558,2.11596391708813,5.70448263155561,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,1.34796496001021,1.75507719831198,3.15487442027073,2.28520787523043,1.32521124570968,1.5923803897944,2.58782771749238,2.75765635983006,2.20231761998777,3.06449611404451,3.07213066512487,1.97829431595291,2.37867873366265,2.6045668527838,3.07101298901519,1.68828783009504,3.51435969886663,1.76777151284201,0.854230084794618,1.1183966749518,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0,0,0,0,0,0.519572009205738,0.70667914902068,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0.161766849947409,0,0,0,0.878342391034642,1.25668024088073,0.255457055208591,0.359445373517761,0,0.381210681219194,1.9472783122627,1.37250180845588,2.63874139437015,2.43354048269187,1.79000820131231,2.28566849015516,1.94689515681309,0.305518091550949,0.124406970610093,0,0,0.390361328888111,0.229902104433473,0.720248519221397,0,0.544291993210623,0.640568601424249,0.655912071918102,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.671032093801859,1.89260953707715,2.46971069710283,1.32167513193519,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.316182685621286,0.295220295959204,0.31399745568275,0.123397163921801,0.296452627087149,0.500535317148282,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0.554259570499814,0,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.318909537314974,0,0,0,1.50791283939272,0,0,0.275936746304732,2.72936002979246,1.99259867206745,0.327869890753351,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0.395287777946524,0.642642632843614,0.141940085208269,0.35613120733451,1.14020871547503,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0.388076051348264,0.857348140126369,0,0,0.987294123612726,0.608929898229199,0.23467170806371,1.27099242518292,0.220528398054962,0.16488625294148,0.161464426695906,0.361877549568935,0.238744688006273,0,0.291480836629851,2.03967832211561,0.512612642393558,0,0.185194527369712,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,0,0.316335993581135,0.813277868507395,0.540026704109006,0,0.436725127492355,0,0.247960367176008,0.26175594198403,0.259229946583586,0,1.12738587736838,0.299033092087958,0,0.583353565032143,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0.129920822977795,0.716106782669926,0.39736270956253,0.120195449519969,0.443068581523732,0.201932899896295,0.15241361331,0.201652370273681,0.0974578807397524,0.288635524920988,0.233753804363138,0,0.665957860122194,0.717710852875806,0.671538465456314,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,0.68741272937475,0,0,0,0.45032120322422,0,0,0.207574695168353,0.798049746802062,0.170733605754134,1.21553358534147,1.04806581313991,0.367687016900028,0.44449345560323,0.618105171716683,0,0.252697211763798,0.50695859978048,0.377252682772152,0.749132059759059,0.256100609619477,0.516919220600519,0.952587382566147,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0,0.561142271657738,0.593175090620871,0.394017929502254,0.409231043169689,0.77468420592983,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0,0.441182838239031,0.231867835620421 | |||
|short_description=p2@Ap2m1 | |||
}} |
Revision as of 03:59, 6 August 2015
Short description: | p2@Ap2m1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ap2m1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -6bp_to_ENSMUST00000090023_5end |
EntrezGene: | 11773 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.30e-41 | 23 |
neuroblast (sensu Vertebrata) | 4.30e-41 | 23 |
neuron | 7.41e-27 | 33 |
neuronal stem cell | 7.41e-27 | 33 |
neuroblast | 7.41e-27 | 33 |
electrically signaling cell | 7.41e-27 | 33 |
electrically responsive cell | 7.92e-22 | 39 |
electrically active cell | 7.92e-22 | 39 |
neural cell | 4.54e-21 | 43 |
ectodermal cell | 1.87e-20 | 44 |
neurectodermal cell | 1.87e-20 | 44 |
neuron of cerebral cortex | 1.69e-12 | 6 |
embryonic cell | 1.11e-10 | 70 |
raphe nuclei neuron | 1.20e-07 | 3 |
neuron of the substantia nigra | 1.78e-07 | 3 |
granule cell | 1.87e-07 | 3 |
striatum neuron | 2.90e-07 | 3 |
hippocampal neuron | 3.19e-07 | 3 |
somatic stem cell | 5.45e-07 | 91 |
multi fate stem cell | 5.45e-07 | 91 |