FFCP PHASE1:Mm9::chr16:16213418..16213457,+: Difference between revisions
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{{FFCP|EntrezGene=67451|HGNC=|MCL_coexpression_id=1351|UniProt=E9PW40,Q9CQ73,E0CX59,E0CXK9|association_with_transcript=0bp_to_ENSMUST00000168544,NM_026163,uc007yib.1,uc007yic.1,uc007yid.1_5end|description=CAGE_peak_1_at_Pkp2_5end|id=chr16:16213418..16213457,+|ontology_enrichment_celltype=CL:0000066!4.53e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,2.38e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.88e-15!47;UBERON:0000160!1.44e-11!43;UBERON:0007100!5.45e-10!18;UBERON:0000948!5.45e-10!18;UBERON:0005498!5.45e-10!18;UBERON:0004140!5.45e-10!18;UBERON:0009881!5.45e-10!18;UBERON:0004141!5.45e-10!18;UBERON:0003084!5.45e-10!18;UBERON:0007005!5.45e-10!18;UBERON:0004139!5.45e-10!18;UBERON:0004291!5.45e-10!18;UBERON:0004119!7.43e-10!130;UBERON:0000925!7.43e-10!130;UBERON:0006595!7.43e-10!130;UBERON:0001007!4.78e-09!128;UBERON:0001555!4.78e-09!128;UBERON:0007026!4.78e-09!128;UBERON:0002365!5.55e-09!25;UBERON:0002330!5.55e-09!25;UBERON:0000344!1.27e-08!15;UBERON:0005409!1.62e-08!59;UBERON:0009854!2.36e-08!23;UBERON:0009856!2.36e-08!23;UBERON:0004921!2.37e-08!126;UBERON:0004185!2.37e-08!126;UBERON:0004535!2.60e-08!23;UBERON:0001009!2.60e-08!23;UBERON:0002107!3.49e-08!22;UBERON:0007499!3.49e-08!22;UBERON:0006925!3.49e-08!22;UBERON:0009497!3.49e-08!22;UBERON:0000015!3.49e-08!22;UBERON:0002423!3.49e-08!22;UBERON:0006235!3.49e-08!22;UBERON:0008835!3.49e-08!22;UBERON:0003894!3.49e-08!22;UBERON:0004161!3.49e-08!22;UBERON:0008836!3.49e-08!22;UBERON:0001242!1.08e-07!13;UBERON:0000060!1.08e-07!13;UBERON:0001262!1.08e-07!13;UBERON:0004786!1.08e-07!13;UBERON:0000466!1.10e-07!79;UBERON:0000481!1.82e-07!230;UBERON:0003103!1.94e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.01e-15,47;UBERON:0000160,3.34e-10,31;UBERON:0007100,4.37e-10,18;UBERON:0000948,4.37e-10,18;UBERON:0005498,4.37e-10,18;UBERON:0004140,4.37e-10,18;UBERON:0009881,4.37e-10,18;UBERON:0004141,4.37e-10,18;UBERON:0003084,4.37e-10,18;UBERON:0007005,4.37e-10,18;UBERON:0004139,4.37e-10,18;UBERON:0004291,4.37e-10,18;UBERON:0002365,4.57e-09,25;UBERON:0002330,4.57e-09,25;UBERON:0000344,1.05e-08,15;UBERON:0009854,1.97e-08,23;UBERON:0009856,1.97e-08,23;UBERON:0004535,2.17e-08,23;UBERON:0001009,2.17e-08,23;UBERON:0002107,2.94e-08,22;UBERON:0007499,2.94e-08,22;UBERON:0006925,2.94e-08,22;UBERON:0009497,2.94e-08,22;UBERON:0000015,2.94e-08,22;UBERON:0002423,2.94e-08,22;UBERON:0006235,2.94e-08,22;UBERON:0008835,2.94e-08,22;UBERON:0003894,2.94e-08,22;UBERON:0004161,2.94e-08,22;UBERON:0008836,2.94e-08,22;UBERON:0004119,6.49e-08,118;UBERON:0000925,6.49e-08,118;UBERON:0006595,6.49e-08,118;UBERON:0001242,9.21e-08,13;UBERON:0001262,9.21e-08,13;UBERON:0004786,9.21e-08,13;UBERON:0005177,1.39e-07,79;UBERON:0003103,2.29e-07,43;UBERON:0001007,3.47e-07,116;UBERON:0001555,3.47e-07,116;UBERON:0007026,3.47e-07,116;UBERON:0005409,5.50e-07,47|phase1_expression=6.40595388419176,90.0356551709552,132.859777901745,80.7579444189236,113.202434967874,63.4583647826943,53.2636820557799,0,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0.999329285446988,0.404950534779652,0,0,0,0,9.95006494767516,0.198581902401771,0,41.7580223490791,44.9642190891653,75.2243872990676,78.8294452971107,59.9010026866772,53.5866042866974,57.4628695852642,42.7939885564738,1.90509202037889,0.61506478758457,0,30.9071233133864,26.2650739666418,27.3586937391575,0,0,0,0,0,0,2.51793635951155,2.53442328048786,2.56965453026354,0.782391344348039,9.15705656797875,25.9229695626677,24.1093074852111,6.99932108126813,14.3752564364972,0,0,0,4.11615097657515,4.29800159908135,37.1283906439758,0.404632921719196,0,0,12.5372476865579,3.55717918444456,2.2497492932035,2.96659908770092,3.5524005747305,3.59520132622086,4.2264013585371,0.414758449233911,0,0.210324961351382,1.14260393761521,1.54607978666129,0.244981598429908,0.383381884072945,0,5.50579404996943,7.02280359468532,4.30098293117482,0.395658863190582,0.548925861614458,1.04182674111352,0.837548997004143,1.12552522006336,2.13917546887534,3.53554302568401,1.85083185038834,0.931997229126503,3.25622631332691,3.47629176491213,32.4648227345879,31.8356834483113,97.2359007202083,41.0174425644741,40.9359142992032,44.3546618226362,16.5724415755467,3.40860645156115,2.59786004602869,2.12003744706204,12.3942209403479,0,2.54805239706646,0,24.246996593256,22.2956681618087,18.704404465547,28.3176021703269,0,1.92974780784272,1.21439728736295,0.913396434936424,2.99800146432876,0.60289056221049,1.99900802130698,2.38766523526383,71.9337356107028,11.5679485535929,2.65383165584962,1.13236794963186,1.10420759230197,4.363877278217,20.5030937339934,1.17112318804619,1.25668024088073,37.2967300604543,0.11981512450592,0,0.254140454146129,0.898743836428936,5.03250663100489,0.628271760564322,1.73824320192276,2.30143911597297,6.44142938134636,3.56930778749067,5.09196819251581,10.698999472468,33.1066813548114,20.6233018768745,11.0602376518298,8.27647575960503,7.20248519221397,7.83665052745718,7.00775941258677,5.12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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67451 | |||
|HGNC= | |||
|MCL_coexpression_id=1351 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PW40,uniprot:Q9CQ73,uniprot:E0CX59,uniprot:E0CXK9 | |||
|association_with_transcript=0bp_to_ENSMUST00000168544,NM_026163,uc007yib.1,uc007yic.1,uc007yid.1_5end | |||
|cluster_id=chr16:16213418..16213457,+ | |||
|description=CAGE_peak_1_at_Pkp2_5end | |||
|id=chr16:16213418..16213457,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.53e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.38e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.88e-15!47;UBERON:0000160!1.44e-11!43;UBERON:0007100!5.45e-10!18;UBERON:0000948!5.45e-10!18;UBERON:0005498!5.45e-10!18;UBERON:0004140!5.45e-10!18;UBERON:0009881!5.45e-10!18;UBERON:0004141!5.45e-10!18;UBERON:0003084!5.45e-10!18;UBERON:0007005!5.45e-10!18;UBERON:0004139!5.45e-10!18;UBERON:0004291!5.45e-10!18;UBERON:0004119!7.43e-10!130;UBERON:0000925!7.43e-10!130;UBERON:0006595!7.43e-10!130;UBERON:0001007!4.78e-09!128;UBERON:0001555!4.78e-09!128;UBERON:0007026!4.78e-09!128;UBERON:0002365!5.55e-09!25;UBERON:0002330!5.55e-09!25;UBERON:0000344!1.27e-08!15;UBERON:0005409!1.62e-08!59;UBERON:0009854!2.36e-08!23;UBERON:0009856!2.36e-08!23;UBERON:0004921!2.37e-08!126;UBERON:0004185!2.37e-08!126;UBERON:0004535!2.60e-08!23;UBERON:0001009!2.60e-08!23;UBERON:0002107!3.49e-08!22;UBERON:0007499!3.49e-08!22;UBERON:0006925!3.49e-08!22;UBERON:0009497!3.49e-08!22;UBERON:0000015!3.49e-08!22;UBERON:0002423!3.49e-08!22;UBERON:0006235!3.49e-08!22;UBERON:0008835!3.49e-08!22;UBERON:0003894!3.49e-08!22;UBERON:0004161!3.49e-08!22;UBERON:0008836!3.49e-08!22;UBERON:0001242!1.08e-07!13;UBERON:0000060!1.08e-07!13;UBERON:0001262!1.08e-07!13;UBERON:0004786!1.08e-07!13;UBERON:0000466!1.10e-07!79;UBERON:0000481!1.82e-07!230;UBERON:0003103!1.94e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.01e-15,47;UBERON:0000160,3.34e-10,31;UBERON:0007100,4.37e-10,18;UBERON:0000948,4.37e-10,18;UBERON:0005498,4.37e-10,18;UBERON:0004140,4.37e-10,18;UBERON:0009881,4.37e-10,18;UBERON:0004141,4.37e-10,18;UBERON:0003084,4.37e-10,18;UBERON:0007005,4.37e-10,18;UBERON:0004139,4.37e-10,18;UBERON:0004291,4.37e-10,18;UBERON:0002365,4.57e-09,25;UBERON:0002330,4.57e-09,25;UBERON:0000344,1.05e-08,15;UBERON:0009854,1.97e-08,23;UBERON:0009856,1.97e-08,23;UBERON:0004535,2.17e-08,23;UBERON:0001009,2.17e-08,23;UBERON:0002107,2.94e-08,22;UBERON:0007499,2.94e-08,22;UBERON:0006925,2.94e-08,22;UBERON:0009497,2.94e-08,22;UBERON:0000015,2.94e-08,22;UBERON:0002423,2.94e-08,22;UBERON:0006235,2.94e-08,22;UBERON:0008835,2.94e-08,22;UBERON:0003894,2.94e-08,22;UBERON:0004161,2.94e-08,22;UBERON:0008836,2.94e-08,22;UBERON:0004119,6.49e-08,118;UBERON:0000925,6.49e-08,118;UBERON:0006595,6.49e-08,118;UBERON:0001242,9.21e-08,13;UBERON:0001262,9.21e-08,13;UBERON:0004786,9.21e-08,13;UBERON:0005177,1.39e-07,79;UBERON:0003103,2.29e-07,43;UBERON:0001007,3.47e-07,116;UBERON:0001555,3.47e-07,116;UBERON:0007026,3.47e-07,116;UBERON:0005409,5.50e-07,47 | |||
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| |||
|short_description=p1@Pkp2 | |||
}} |
Revision as of 02:04, 6 August 2015
Short description: | p1@Pkp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pkp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1351 |
Association with transcript: | 0bp_to_ENSMUST00000168544, NM_026163, uc007yib.1, uc007yic.1, uc007yid.1_5end |
EntrezGene: | 67451 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.38e-07 | 25 |