FFCP PHASE1:Hg19::chr4:74608483..74608501,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6025 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-353bp_to_AJ227913_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_9_at_IL8_5end | |||
|id=chr4:74608483..74608501,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.69e-32!76;CL:0002057!1.23e-30!42;CL:0000860!1.65e-29!45;CL:0002009!3.60e-26!65;CL:0002194!9.35e-26!63;CL:0000576!9.35e-26!63;CL:0000040!9.35e-26!63;CL:0000559!9.35e-26!63;CL:0000557!6.77e-23!71;CL:0000839!5.88e-22!70;CL:0000359!1.19e-19!32;CL:0000048!1.99e-19!430;CL:0000723!9.98e-19!436;CL:0000034!1.40e-18!444;CL:0000763!5.37e-18!112;CL:0000049!5.37e-18!112;CL:0000738!5.52e-17!140;CL:0000192!3.00e-13!42;CL:0000514!3.00e-13!42;CL:0002087!3.19e-13!119;CL:0000094!5.44e-13!8;CL:0002031!2.02e-11!124;CL:0000037!5.31e-11!172;CL:0000566!5.31e-11!172;CL:0002032!9.85e-11!165;CL:0000837!9.85e-11!165;CL:0000680!1.18e-10!57;CL:0000056!1.18e-10!57;CL:0000355!1.18e-10!57;CL:0000988!3.83e-10!182;CL:0000187!1.17e-09!54;CL:0000134!2.73e-09!358;CL:0000183!4.48e-09!59;CL:0000081!6.72e-09!11;CL:0002539!7.22e-09!10;CL:0002320!1.04e-08!365;CL:0002595!1.40e-08!5;CL:0000012!2.33e-08!682;CL:0002371!3.02e-08!591;CL:0000393!4.84e-08!60;CL:0000211!4.84e-08!60;CL:0000548!5.62e-08!679;CL:0000004!5.62e-08!679;CL:0000255!5.62e-08!679;CL:0000144!6.41e-08!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-44;33!CL:0002057;1.87e-44;33!CL:0000473;5.85e-33;39!CL:0000234;5.85e-33;39!CL:0000576;1.32e-24;48!CL:0000766;4.66e-22;69!CL:0000359;1.69e-19;32!CL:0002595;4.75e-16;5!CL:0000094;3.34e-15;8!CL:0000192;2.70e-12;43!CL:0000775;1.99e-11;3!CL:0000081;7.57e-11;11!CL:0000763;4.01e-10;100!CL:0000771;3.14e-08;2!CL:0002539;1.42e-07;10!CL:0002593;1.48e-07;2!CL:0002087;3.53e-07;104!CL:0002589;4.24e-07;2!CL:0000187;6.65e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.53e-48,42;CL:0002057,2.53e-48,42;CL:0000473,7.39e-45,48;CL:0000234,7.39e-45,48;CL:0000766,1.08e-42,72;CL:0002194,2.16e-34,59;CL:0000576,2.16e-34,59;CL:0000040,2.16e-34,59;CL:0000559,2.16e-34,59;CL:0002009,4.82e-33,61;CL:0000839,5.02e-30,66;CL:0000557,1.78e-29,67;CL:0000763,1.16e-25,108;CL:0000049,1.16e-25,108;CL:0000359,4.89e-21,32;CL:0000738,5.78e-20,136;CL:0000034,6.79e-17,441;CL:0000048,6.79e-17,427;CL:0000723,1.76e-16,433;CL:0002595,3.99e-16,5;CL:0002087,1.51e-15,115;CL:0000094,2.68e-15,8;CL:0000192,1.14e-14,43;CL:0000514,1.14e-14,43;CL:0000037,1.54e-14,168;CL:0002032,1.84e-14,161;CL:0000837,1.84e-14,161;CL:0002031,1.92e-13,120;CL:0000988,2.27e-13,177;CL:0000775,1.99e-11,3;CL:0000081,6.48e-11,11;CL:0000187,1.17e-10,55;CL:0000680,6.38e-10,58;CL:0000056,6.38e-10,58;CL:0000355,6.38e-10,58;CL:0000393,2.94e-09,61;CL:0000211,2.94e-09,61;CL:0000771,3.09e-08,2;CL:0000134,1.36e-07,354;CL:0002539,1.40e-07,10;CL:0002593,1.51e-07,2;CL:0002320,2.97e-07,361;CL:0002589,5.13e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.22e-36;42!CL:0000514;2.70e-12;43 | |||
|ontology_enrichment_disease=DOID:2394!3.28e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.33e-22!167;UBERON:0003081!2.95e-19!216;UBERON:0002371!6.21e-19!80;UBERON:0001474!8.98e-17!86;UBERON:0001637!6.31e-16!42;UBERON:0003509!6.31e-16!42;UBERON:0004572!6.31e-16!42;UBERON:0002193!2.59e-15!112;UBERON:0004573!4.31e-15!33;UBERON:0004571!4.31e-15!33;UBERON:0002390!4.81e-15!102;UBERON:0003061!4.81e-15!102;UBERON:0004765!3.75e-14!101;UBERON:0001434!3.75e-14!101;UBERON:0002405!7.41e-13!115;UBERON:0000055!3.34e-11!69;UBERON:0001981!7.93e-11!60;UBERON:0007500!7.93e-11!60;UBERON:0004537!7.93e-11!60;UBERON:0006965!7.93e-11!60;UBERON:0002049!3.30e-10!79;UBERON:0007798!3.30e-10!79;UBERON:0004535!3.50e-10!110;UBERON:0001009!1.24e-09!113;UBERON:0001134!1.76e-09!61;UBERON:0002036!1.76e-09!61;UBERON:0003082!1.76e-09!61;UBERON:0004872!2.36e-09!84;UBERON:0000926!4.90e-09!448;UBERON:0004120!4.90e-09!448;UBERON:0006603!4.90e-09!448;UBERON:0002385!5.90e-09!63;UBERON:0001015!5.90e-09!63;UBERON:0000383!5.90e-09!63;UBERON:0004237!7.22e-09!10;UBERON:0004695!7.22e-09!10;UBERON:0002111!7.22e-09!10;UBERON:0004178!7.22e-09!10;UBERON:0003834!1.40e-08!5;UBERON:0001533!1.40e-08!5;UBERON:0002384!2.57e-08!375;UBERON:0004290!3.38e-08!70;UBERON:0000486!8.23e-08!82;UBERON:0003513!7.16e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;4.75e-16;5!UBERON:0001533;4.75e-16;5!UBERON:0004573;7.02e-14;33!UBERON:0004571;7.02e-14;33!UBERON:0003513;2.23e-11;7!UBERON:0001637;1.69e-10;42!UBERON:0003509;1.69e-10;42!UBERON:0004572;1.69e-10;42!UBERON:0004237;1.42e-07;10!UBERON:0004695;1.42e-07;10!UBERON:0002111;1.42e-07;10!UBERON:0004178;1.42e-07;10!UBERON:0002119;1.44e-07;4!UBERON:0002456;1.48e-07;2!UBERON:0001529;4.24e-07;2!UBERON:0007204;4.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.40e-26,167;UBERON:0002371,3.57e-25,76;UBERON:0003081,2.02e-24,203;UBERON:0001474,7.91e-23,82;UBERON:0002405,1.11e-22,93;UBERON:0004765,3.46e-20,90;UBERON:0002193,5.89e-20,108;UBERON:0002390,1.81e-19,98;UBERON:0003061,1.81e-19,98;UBERON:0001434,1.75e-17,100;UBERON:0000926,4.54e-17,315;UBERON:0004120,4.54e-17,315;UBERON:0006603,4.54e-17,315;UBERON:0003834,3.99e-16,5;UBERON:0001533,3.99e-16,5;UBERON:0004573,2.37e-15,33;UBERON:0004571,2.37e-15,33;UBERON:0001637,4.14e-15,42;UBERON:0003509,4.14e-15,42;UBERON:0004572,4.14e-15,42;UBERON:0003513,1.98e-11,7;UBERON:0000055,2.14e-10,68;UBERON:0007500,1.08e-09,59;UBERON:0001981,1.08e-09,59;UBERON:0004537,1.08e-09,59;UBERON:0006965,1.08e-09,59;UBERON:0001134,4.73e-09,62;UBERON:0002036,4.73e-09,62;UBERON:0003082,4.73e-09,62;UBERON:0004872,7.34e-09,83;UBERON:0002385,1.17e-08,64;UBERON:0001015,1.17e-08,64;UBERON:0000383,1.17e-08,64;UBERON:0002329,1.48e-08,71;UBERON:0003059,1.48e-08,71;UBERON:0007282,1.48e-08,71;UBERON:0004290,1.48e-08,71;UBERON:0009618,1.48e-08,71;UBERON:0002049,1.53e-08,78;UBERON:0007798,1.53e-08,78;UBERON:0003077,2.19e-08,72;UBERON:0007285,2.19e-08,72;UBERON:0004535,2.76e-08,109;UBERON:0007524,3.21e-08,73;UBERON:0001009,6.20e-08,112;UBERON:0004237,1.40e-07,10;UBERON:0004695,1.40e-07,10;UBERON:0002111,1.40e-07,10;UBERON:0004178,1.40e-07,10;UBERON:0002456,1.51e-07,2;UBERON:0002119,1.60e-07,4;UBERON:0007503,1.85e-07,78;UBERON:0001529,5.13e-07,2;UBERON:0007204,5.13e-07,2;UBERON:0002384,8.52e-07,371;UBERON:0000486,8.59e-07,83 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,2.01697543935533,0,2.19093027116212,3.90346239032406,0,0,0,0,0,0,0,0,0,1.96682138424452,0.767658796194425,0.77408061658038,0,0,0,0,0,0,7.20194031091441,4.8130667392834,10.199510923645,0,0,0,0,0.377875943688809,0.242584061187816,3.71886459049095,2.87817521615278,7.12324653058738,8.05538698502021,1.7931249457037,9.93225365532058,22.4084692478802,21.3009945582663,27.0852973188684,1.69418105588344,0.818718450173537,6.96642801779762,27.8536342057521,11.5534449747394,32.6061934157511,0,0,0,38.0174102603445,21.5606385382633,34.8780459437522,3.51748131359441,2.08593167368081,2.17188844705117,20.5835830895345,13.6262725315399,36.3931745557017,0,0.425208599930087,0,0,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,5.04457706683382,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,15.8136500923276,38.7780264148325,0,0,0,0.264818361626438,0,0,0,2.1349799145941,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,2.77791307545966,1.52203321787679,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0.502257091432126,4.21667878966063,0,0,0,0.723906533337896,0.205476322550383,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,18.7251755986796,62.8239064328452,12.018049889645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,1.3940745403212,0.924100740528266,0.532306030317022,1.73986598415015,1.48259375283136,2.00374841438788,0,0,0,0,0,0.318203247925937,2.35484592059769,0,0,0,0.202182481573316,1.58510321173008,0.842516912477962,0,7.7988316682011,2.11300293513511,0,0,0,1.65409603063837,3.98063385144732,4.38450885253763,0,0,1.42037263873893,1.8589409885985,0,0,0,0.7133421029625,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37304041038154,0,0.777186002913902,3.69637874974085,1.59296767163702,6.29724357029046,1.08684069813382,0,0,0,0.450772826991655,0.380805212168795,0.813741466409323,4.18251916165887,0.537052785212442,0,1.19428766609585,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p9@IL8 | |||
}} |
Revision as of 01:33, 22 January 2014
Short description: | p9@IL8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_IL8_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -353bp_to_AJ227913_5end |
EntrezGene: | IL8 |
HGNC: | 6025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data