FFCP PHASE1:Mm9::chr15:61870839..61870847,+: Difference between revisions
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{{FFCP|EntrezGene=19296|HGNC=|UniProt=|association_with_transcript=27bp_to_uc007vyn.1_5end|description=CAGE_peak_3_at_Pvt1_5end|id=chr15:61870839..61870847,+|ontology_enrichment_celltype=CL:0000107!2.71e-11!9;CL:0000680!1.13e-07!6;CL:0000183!1.13e-07!6;CL:0000187!1.13e-07!6;CL:0000056!1.13e-07!6|ontology_enrichment_celltype_v019_2=CL:0000107,3.77e-29,9;CL:0000192,2.54e-18,3;CL:0000359,2.54e-18,3;CL:0002539,2.54e-18,3;CL:0000514,2.54e-18,3;CL:0000393,6.19e-16,39;CL:0000211,6.19e-16,39;CL:0000680,1.02e-15,6;CL:0000187,1.02e-15,6;CL:0000056,1.02e-15,6;CL:0000222,1.66e-13,7;CL:0002321,8.72e-12,70;CL:0000355,1.50e-10,9;CL:0000034,1.76e-09,97;CL:0002293,3.05e-08,3;CL:0000349,5.02e-08,3;CL:0000351,5.02e-08,3;CL:0000540,1.61e-07,33;CL:0000047,1.61e-07,33;CL:0000031,1.61e-07,33;CL:0000404,1.61e-07,33;CL:0000723,2.76e-07,91;CL:0000048,2.76e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!6.93e-13!11;UBERON:0002410!2.71e-11!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.77e-29,9;UBERON:0000010,9.19e-24,11;UBERON:0001135,2.54e-18,3;UBERON:0004237,2.54e-18,3;UBERON:0004695,2.54e-18,3;UBERON:0002111,2.54e-18,3;UBERON:0004178,2.54e-18,3;UBERON:0000011,4.90e-17,3;UBERON:0000947,6.89e-14,4;UBERON:0001637,6.89e-14,4;UBERON:0004573,6.89e-14,4;UBERON:0003509,6.89e-14,4;UBERON:0004571,6.89e-14,4;UBERON:0010191,6.89e-14,4;UBERON:0004572,6.89e-14,4;UBERON:0000055,3.23e-11,5;UBERON:0007500,3.23e-11,5;UBERON:0001981,3.23e-11,5;UBERON:0002049,3.23e-11,5;UBERON:0007798,3.23e-11,5;UBERON:0004537,3.23e-11,5;UBERON:0006965,3.23e-11,5;UBERON:0001134,1.50e-10,9;UBERON:0002036,1.50e-10,9;UBERON:0002385,1.50e-10,9;UBERON:0000486,1.50e-10,9;UBERON:0007503,1.50e-10,9;UBERON:0001015,1.50e-10,9;UBERON:0002329,1.50e-10,9;UBERON:0003082,1.50e-10,9;UBERON:0003059,1.50e-10,9;UBERON:0007282,1.50e-10,9;UBERON:0004290,1.50e-10,9;UBERON:0009618,1.50e-10,9;UBERON:0000383,1.64e-09,10;UBERON:0007524,1.16e-08,11;UBERON:0003077,1.16e-08,11;UBERON:0007285,1.16e-08,11;UBERON:0000013,3.05e-08,3;UBERON:0010313,3.05e-08,3;UBERON:0002342,3.05e-08,3;UBERON:0002005,3.05e-08,3;UBERON:0005428,3.05e-08,3;UBERON:0005062,3.05e-08,3;UBERON:0000358,5.02e-08,3;UBERON:0000307,5.02e-08,3;UBERON:0007010,5.02e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,3.07532393792285,0,0,0,0,0,0,0,0,0,0,5.28766635497425,6.58950052926845,2.9367480345869,0.782391344348039,0.218025156380447,0,0.194429899074283,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,1.54701627683233,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0,0.517875767294343,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0,0.94652465824877,2.34263246577983,1.29254038639679,2.86762557543062,1.55959071857676,1.13230612315533,1.61924280669958,1.46127928955656,0.790575555893047,0,0,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0.661585194164886,0.32977250588296,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,1.52513556236109,1.17519231454855,0,0,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p3@Pvt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19296 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=27bp_to_uc007vyn.1_5end | |||
|cluster_id=chr15:61870839..61870847,+ | |||
|description=CAGE_peak_3_at_Pvt1_5end | |||
|id=chr15:61870839..61870847,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.71e-11!9;CL:0000680!1.13e-07!6;CL:0000183!1.13e-07!6;CL:0000187!1.13e-07!6;CL:0000056!1.13e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.77e-29,9;CL:0000192,2.54e-18,3;CL:0000359,2.54e-18,3;CL:0002539,2.54e-18,3;CL:0000514,2.54e-18,3;CL:0000393,6.19e-16,39;CL:0000211,6.19e-16,39;CL:0000680,1.02e-15,6;CL:0000187,1.02e-15,6;CL:0000056,1.02e-15,6;CL:0000222,1.66e-13,7;CL:0002321,8.72e-12,70;CL:0000355,1.50e-10,9;CL:0000034,1.76e-09,97;CL:0002293,3.05e-08,3;CL:0000349,5.02e-08,3;CL:0000351,5.02e-08,3;CL:0000540,1.61e-07,33;CL:0000047,1.61e-07,33;CL:0000031,1.61e-07,33;CL:0000404,1.61e-07,33;CL:0000723,2.76e-07,91;CL:0000048,2.76e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!6.93e-13!11;UBERON:0002410!2.71e-11!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.77e-29,9;UBERON:0000010,9.19e-24,11;UBERON:0001135,2.54e-18,3;UBERON:0004237,2.54e-18,3;UBERON:0004695,2.54e-18,3;UBERON:0002111,2.54e-18,3;UBERON:0004178,2.54e-18,3;UBERON:0000011,4.90e-17,3;UBERON:0000947,6.89e-14,4;UBERON:0001637,6.89e-14,4;UBERON:0004573,6.89e-14,4;UBERON:0003509,6.89e-14,4;UBERON:0004571,6.89e-14,4;UBERON:0010191,6.89e-14,4;UBERON:0004572,6.89e-14,4;UBERON:0000055,3.23e-11,5;UBERON:0007500,3.23e-11,5;UBERON:0001981,3.23e-11,5;UBERON:0002049,3.23e-11,5;UBERON:0007798,3.23e-11,5;UBERON:0004537,3.23e-11,5;UBERON:0006965,3.23e-11,5;UBERON:0001134,1.50e-10,9;UBERON:0002036,1.50e-10,9;UBERON:0002385,1.50e-10,9;UBERON:0000486,1.50e-10,9;UBERON:0007503,1.50e-10,9;UBERON:0001015,1.50e-10,9;UBERON:0002329,1.50e-10,9;UBERON:0003082,1.50e-10,9;UBERON:0003059,1.50e-10,9;UBERON:0007282,1.50e-10,9;UBERON:0004290,1.50e-10,9;UBERON:0009618,1.50e-10,9;UBERON:0000383,1.64e-09,10;UBERON:0007524,1.16e-08,11;UBERON:0003077,1.16e-08,11;UBERON:0007285,1.16e-08,11;UBERON:0000013,3.05e-08,3;UBERON:0010313,3.05e-08,3;UBERON:0002342,3.05e-08,3;UBERON:0002005,3.05e-08,3;UBERON:0005428,3.05e-08,3;UBERON:0005062,3.05e-08,3;UBERON:0000358,5.02e-08,3;UBERON:0000307,5.02e-08,3;UBERON:0007010,5.02e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,3.07532393792285,0,0,0,0,0,0,0,0,0,0,5.28766635497425,6.58950052926845,2.9367480345869,0.782391344348039,0.218025156380447,0,0.194429899074283,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,1.54701627683233,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0,0.517875767294343,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0,0.94652465824877,2.34263246577983,1.29254038639679,2.86762557543062,1.55959071857676,1.13230612315533,1.61924280669958,1.46127928955656,0.790575555893047,0,0,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0.661585194164886,0.32977250588296,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,1.52513556236109,1.17519231454855,0,0,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Pvt1 | |||
}} |
Revision as of 08:42, 5 August 2015
Short description: | p3@Pvt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pvt1_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_uc007vyn.1_5end |
EntrezGene: | 19296 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.77e-29 | 9 |
smooth muscle cell | 2.54e-18 | 3 |
vascular associated smooth muscle cell | 2.54e-18 | 3 |
aortic smooth muscle cell | 2.54e-18 | 3 |
smooth muscle myoblast | 2.54e-18 | 3 |
electrically responsive cell | 6.19e-16 | 39 |
electrically active cell | 6.19e-16 | 39 |
muscle precursor cell | 1.02e-15 | 6 |
muscle cell | 1.02e-15 | 6 |
myoblast | 1.02e-15 | 6 |
mesodermal cell | 1.66e-13 | 7 |
embryonic cell | 8.72e-12 | 70 |
multi-potent skeletal muscle stem cell | 1.50e-10 | 9 |
stem cell | 1.76e-09 | 97 |
epithelial cell of thymus | 3.05e-08 | 3 |
extraembryonic cell | 5.02e-08 | 3 |
trophoblast cell | 5.02e-08 | 3 |
neuron | 1.61e-07 | 33 |
neuronal stem cell | 1.61e-07 | 33 |
neuroblast | 1.61e-07 | 33 |
electrically signaling cell | 1.61e-07 | 33 |
somatic stem cell | 2.76e-07 | 91 |
multi fate stem cell | 2.76e-07 | 91 |