FFCP PHASE1:Mm9::chr14:45609577..45609601,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:45609577..45609601,-|id=chr14:45609577..45609601,-|ontology_enrichment_celltype=CL:0000624!5.81e-09!8;CL:0000893!6.30e-09!6;CL:0002489!6.30e-09!6;CL:0000898!6.30e-09!6;CL:0000809!6.30e-09!6;CL:0000810!6.30e-09!6;CL:0000895!6.30e-09!6;CL:0000808!6.30e-09!6;CL:0000894!6.30e-09!6;CL:0000806!6.30e-09!6;CL:0000807!6.30e-09!6;CL:0000805!6.30e-09!6;CL:0002425!6.30e-09!6;CL:0002436!6.30e-09!6;CL:0002427!6.30e-09!6;CL:0002428!6.30e-09!6;CL:0002429!6.30e-09!6;CL:0002433!6.30e-09!6;CL:0002431!6.30e-09!6;CL:0002432!6.30e-09!6;CL:0000791!8.39e-08!9;CL:0000789!8.39e-08!9;CL:0002420!8.39e-08!9;CL:0002419!8.39e-08!9;CL:0000790!8.39e-08!9;CL:0000838!5.98e-07!12|ontology_enrichment_celltype_v019_2=CL:0000815,5.23e-09,1;CL:0000792,5.23e-09,1;CL:0000624,8.61e-09,8;CL:0000355,5.72e-08,9;CL:0000791,7.11e-08,9;CL:0000789,7.11e-08,9;CL:0002420,7.11e-08,9;CL:0002419,7.11e-08,9;CL:0000790,7.11e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.10e-22,3;DOID:4045,1.10e-22,3;DOID:0050686,1.13e-11,6|ontology_enrichment_uberon=UBERON:0004177!9.04e-13!29;UBERON:0003408!2.32e-11!24;UBERON:0002193!6.70e-11!48;UBERON:0002370!2.82e-10!23;UBERON:0000974!2.82e-10!23;UBERON:0004807!2.82e-10!23;UBERON:0005058!2.82e-10!23;UBERON:0003351!2.82e-10!23;UBERON:0009113!2.82e-10!23;UBERON:0003295!2.82e-10!23;UBERON:0009722!2.82e-10!23;UBERON:0005562!2.82e-10!23;UBERON:0007690!2.82e-10!23;UBERON:0006562!1.10e-09!24;UBERON:0001557!1.10e-09!24;UBERON:0001042!1.10e-09!24;UBERON:0008814!1.10e-09!24;UBERON:0009145!1.10e-09!24;UBERON:0002390!1.47e-09!45;UBERON:0003061!1.47e-09!45;UBERON:0001004!5.00e-09!42;UBERON:0000065!3.39e-08!41;UBERON:0000072!3.53e-08!27;UBERON:0002405!7.44e-08!70;UBERON:0005057!9.61e-08!51;UBERON:0007823!1.79e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.14e-15,2;UBERON:0000076,1.14e-15,2;UBERON:0005333,1.14e-15,2;UBERON:0008425,1.14e-15,2;UBERON:0005311,1.14e-15,2;UBERON:0000029,2.89e-08,1;UBERON:0001097,2.89e-08,1;UBERON:0003968,2.89e-08,1;UBERON:0001467,2.89e-08,1;UBERON:0001134,5.72e-08,9;UBERON:0002036,5.72e-08,9;UBERON:0002385,5.72e-08,9;UBERON:0000486,5.72e-08,9;UBERON:0007503,5.72e-08,9;UBERON:0001015,5.72e-08,9;UBERON:0002329,5.72e-08,9;UBERON:0003082,5.72e-08,9;UBERON:0003059,5.72e-08,9;UBERON:0007282,5.72e-08,9;UBERON:0004290,5.72e-08,9;UBERON:0009618,5.72e-08,9;UBERON:0000383,3.18e-07,10|phase1_expression=0,0,0,0,0,0,0,6.71441281896197,0.140788722151667,0.468129052643987,2.05461561870606,1.03703806693937,0.856003649656029,0.524522414513984,0,0.202475267389826,0,0.473193248037357,0.822686601634433,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,4.18818995179039,6.47054636834116,6.83045484958446,3.88408282424923,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,5.90117127622843,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,0.170870880797853,0,0.555583582109135,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.403865799792591,0,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:45609577..45609601,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:45609577..45609601,- | |||
|description=CAGE_peak_at_chr14:45609577..45609601,- | |||
|id=chr14:45609577..45609601,- | |||
|ontology_enrichment_celltype=CL:0000624!5.81e-09!8;CL:0000893!6.30e-09!6;CL:0002489!6.30e-09!6;CL:0000898!6.30e-09!6;CL:0000809!6.30e-09!6;CL:0000810!6.30e-09!6;CL:0000895!6.30e-09!6;CL:0000808!6.30e-09!6;CL:0000894!6.30e-09!6;CL:0000806!6.30e-09!6;CL:0000807!6.30e-09!6;CL:0000805!6.30e-09!6;CL:0002425!6.30e-09!6;CL:0002436!6.30e-09!6;CL:0002427!6.30e-09!6;CL:0002428!6.30e-09!6;CL:0002429!6.30e-09!6;CL:0002433!6.30e-09!6;CL:0002431!6.30e-09!6;CL:0002432!6.30e-09!6;CL:0000791!8.39e-08!9;CL:0000789!8.39e-08!9;CL:0002420!8.39e-08!9;CL:0002419!8.39e-08!9;CL:0000790!8.39e-08!9;CL:0000838!5.98e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.23e-09,1;CL:0000792,5.23e-09,1;CL:0000624,8.61e-09,8;CL:0000355,5.72e-08,9;CL:0000791,7.11e-08,9;CL:0000789,7.11e-08,9;CL:0002420,7.11e-08,9;CL:0002419,7.11e-08,9;CL:0000790,7.11e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.10e-22,3;DOID:4045,1.10e-22,3;DOID:0050686,1.13e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.04e-13!29;UBERON:0003408!2.32e-11!24;UBERON:0002193!6.70e-11!48;UBERON:0002370!2.82e-10!23;UBERON:0000974!2.82e-10!23;UBERON:0004807!2.82e-10!23;UBERON:0005058!2.82e-10!23;UBERON:0003351!2.82e-10!23;UBERON:0009113!2.82e-10!23;UBERON:0003295!2.82e-10!23;UBERON:0009722!2.82e-10!23;UBERON:0005562!2.82e-10!23;UBERON:0007690!2.82e-10!23;UBERON:0006562!1.10e-09!24;UBERON:0001557!1.10e-09!24;UBERON:0001042!1.10e-09!24;UBERON:0008814!1.10e-09!24;UBERON:0009145!1.10e-09!24;UBERON:0002390!1.47e-09!45;UBERON:0003061!1.47e-09!45;UBERON:0001004!5.00e-09!42;UBERON:0000065!3.39e-08!41;UBERON:0000072!3.53e-08!27;UBERON:0002405!7.44e-08!70;UBERON:0005057!9.61e-08!51;UBERON:0007823!1.79e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.14e-15,2;UBERON:0000076,1.14e-15,2;UBERON:0005333,1.14e-15,2;UBERON:0008425,1.14e-15,2;UBERON:0005311,1.14e-15,2;UBERON:0000029,2.89e-08,1;UBERON:0001097,2.89e-08,1;UBERON:0003968,2.89e-08,1;UBERON:0001467,2.89e-08,1;UBERON:0001134,5.72e-08,9;UBERON:0002036,5.72e-08,9;UBERON:0002385,5.72e-08,9;UBERON:0000486,5.72e-08,9;UBERON:0007503,5.72e-08,9;UBERON:0001015,5.72e-08,9;UBERON:0002329,5.72e-08,9;UBERON:0003082,5.72e-08,9;UBERON:0003059,5.72e-08,9;UBERON:0007282,5.72e-08,9;UBERON:0004290,5.72e-08,9;UBERON:0009618,5.72e-08,9;UBERON:0000383,3.18e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,6.71441281896197,0.140788722151667,0.468129052643987,2.05461561870606,1.03703806693937,0.856003649656029,0.524522414513984,0,0.202475267389826,0,0.473193248037357,0.822686601634433,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,4.18818995179039,6.47054636834116,6.83045484958446,3.88408282424923,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,5.90117127622843,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,0.170870880797853,0,0.555583582109135,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.403865799792591,0,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:45609577..45609601,- | |||
}} |
Latest revision as of 07:58, 4 August 2015
Short description: | p@chr14:45609577..45609601, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:45609577..45609601, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.23e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.23e-09 | 1 |
CD4-positive, alpha-beta T cell | 8.61e-09 | 8 |
multi-potent skeletal muscle stem cell | 5.72e-08 | 9 |
mature alpha-beta T cell | 7.11e-08 | 9 |
alpha-beta T cell | 7.11e-08 | 9 |
immature T cell | 7.11e-08 | 9 |
mature T cell | 7.11e-08 | 9 |
immature alpha-beta T cell | 7.11e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.14e-15 | 2 |
external ectoderm | 1.14e-15 | 2 |
mammary bud | 1.14e-15 | 2 |
mammary ridge | 1.14e-15 | 2 |
mammary placode | 1.14e-15 | 2 |
lymph node | 2.89e-08 | 1 |
axillary lymph node | 2.89e-08 | 1 |
peripheral lymph node | 2.89e-08 | 1 |
shoulder | 2.89e-08 | 1 |
skeletal muscle tissue | 5.72e-08 | 9 |
striated muscle tissue | 5.72e-08 | 9 |
muscle tissue | 5.72e-08 | 9 |
multilaminar epithelium | 5.72e-08 | 9 |
epithelial vesicle | 5.72e-08 | 9 |
musculature | 5.72e-08 | 9 |
somite | 5.72e-08 | 9 |
myotome | 5.72e-08 | 9 |
presomitic mesoderm | 5.72e-08 | 9 |
presumptive segmental plate | 5.72e-08 | 9 |
dermomyotome | 5.72e-08 | 9 |
trunk paraxial mesoderm | 5.72e-08 | 9 |
musculature of body | 3.18e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.10e-22 | 3 |
muscle cancer | 1.10e-22 | 3 |
organ system cancer | 1.13e-11 | 6 |