FFCP PHASE1:Hg19::chr4:10118443..10118454,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12754 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000499869_5end | |||
|coexpression_cluster_id=C4355 | |||
|description=CAGE_peak_4_at_WDR1_5end | |||
|id=chr4:10118443..10118454,- | |||
|ontology_enrichment_celltype=CL:0000144!1.68e-31!625;CL:0002371!3.77e-29!591;CL:0000548!3.81e-26!679;CL:0000004!3.81e-26!679;CL:0000255!3.81e-26!679;CL:0000012!2.42e-25!682;CL:0000222!2.61e-23!119;CL:0002321!2.12e-20!248;CL:0000220!4.00e-20!246;CL:0000055!1.58e-19!180;CL:0000003!5.31e-18!722;CL:0000183!1.62e-15!59;CL:0000393!1.87e-14!60;CL:0000211!1.87e-14!60;CL:0000192!2.07e-14!42;CL:0000514!2.07e-14!42;CL:0000359!8.19e-14!32;CL:0000187!1.97e-13!54;CL:0000680!2.10e-13!57;CL:0000056!2.10e-13!57;CL:0000355!2.10e-13!57;CL:0000115!4.08e-10!35;CL:0002078!9.54e-10!44;CL:0000213!1.34e-08!57;CL:0000215!1.34e-08!57;CL:0002139!1.95e-08!24;CL:0000071!1.91e-07!18;CL:0002546!1.91e-07!18;CL:0000723!2.69e-07!436;CL:0000048!2.87e-07!430;CL:0000034!3.22e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.40e-13;32!CL:0000192;3.24e-10;43!CL:0000115;7.67e-09;36!CL:0002139;2.38e-08;24!CL:1000449;2.29e-07;15!CL:0000071;2.31e-07;18!CL:0000393;2.52e-07;61!CL:0000211;2.52e-07;61!CL:0000187;3.10e-07;55!CL:0002078;9.98e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.55e-23,121;CL:0002321,2.01e-20,250;CL:0000393,6.93e-14,61;CL:0000211,6.93e-14,61;CL:0000359,8.18e-14,32;CL:0000192,1.08e-13,43;CL:0000514,1.08e-13,43;CL:0000187,7.44e-13,55;CL:0000680,7.55e-13,58;CL:0000056,7.55e-13,58;CL:0000355,7.55e-13,58;CL:0000115,1.78e-10,36;CL:0002078,4.31e-10,45;CL:0000213,6.50e-09,58;CL:0000215,6.50e-09,58;CL:0002139,1.95e-08,24;CL:1000449,1.84e-07,15;CL:0000723,1.85e-07,433;CL:0000071,1.91e-07,18;CL:0002546,1.91e-07,18;CL:0000048,1.95e-07,427;CL:0000034,2.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;3.24e-10;43!CL:0002546;2.31e-07;18!CL:0000222;3.48e-07;121!CL:0000355;4.56e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.70e-22!79;UBERON:0007798!1.70e-22!79;UBERON:0004535!6.61e-20!110;UBERON:0001009!1.08e-19!113;UBERON:0000055!4.57e-19!69;UBERON:0001981!2.67e-17!60;UBERON:0007500!2.67e-17!60;UBERON:0004537!2.67e-17!60;UBERON:0006965!2.67e-17!60;UBERON:0004872!8.10e-17!84;UBERON:0001637!1.96e-16!42;UBERON:0003509!1.96e-16!42;UBERON:0004572!1.96e-16!42;UBERON:0003914!1.01e-15!118;UBERON:0000490!6.76e-13!138;UBERON:0004573!8.55e-13!33;UBERON:0004571!8.55e-13!33;UBERON:0001134!1.02e-12!61;UBERON:0002036!1.02e-12!61;UBERON:0003082!1.02e-12!61;UBERON:0000486!1.29e-12!82;UBERON:0004290!1.87e-12!70;UBERON:0002385!3.72e-12!63;UBERON:0001015!3.72e-12!63;UBERON:0000383!3.72e-12!63;UBERON:0000914!3.90e-12!83;UBERON:0002329!3.90e-12!83;UBERON:0003077!3.90e-12!83;UBERON:0003059!3.90e-12!83;UBERON:0007282!3.90e-12!83;UBERON:0009618!3.90e-12!83;UBERON:0007285!3.90e-12!83;UBERON:0003081!4.73e-12!216;UBERON:0005256!1.03e-11!143;UBERON:0000926!5.17e-08!448;UBERON:0004120!5.17e-08!448;UBERON:0006603!5.17e-08!448;UBERON:0000947!8.46e-08!21;UBERON:0010191!8.46e-08!21;UBERON:0002100!9.56e-08!216;UBERON:0000487!1.65e-07!22;UBERON:0001986!1.91e-07!18;UBERON:0004638!1.91e-07!18;UBERON:0004852!1.91e-07!18;UBERON:0000353!5.82e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.49e-12;42!UBERON:0003509;8.49e-12;42!UBERON:0004572;8.49e-12;42!UBERON:0007500;1.66e-11;56!UBERON:0001981;1.66e-11;56!UBERON:0004537;1.66e-11;56!UBERON:0004573;2.14e-11;33!UBERON:0004571;2.14e-11;33!UBERON:0003914;6.97e-11;74!UBERON:0000055;1.28e-09;65!UBERON:0002049;1.54e-09;75!UBERON:0007798;1.54e-09;75!UBERON:0000947;6.63e-08;21!UBERON:0010191;6.63e-08;21!UBERON:0000487;1.71e-07;22!UBERON:0006555;2.29e-07;15!UBERON:0004819;2.29e-07;15!UBERON:0001285;2.29e-07;15!UBERON:0007684;2.29e-07;15!UBERON:0004638;2.31e-07;18!UBERON:0001986;2.31e-07;18!UBERON:0004852;2.31e-07;18!UBERON:0000353;3.06e-07;15!UBERON:0000025;4.01e-07;93!UBERON:0000490;7.02e-07;33!UBERON:0004535;7.36e-07;109 | |||
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| |||
|short_description=p4@WDR1 | |||
}} |
Revision as of 00:12, 22 January 2014
Short description: | p4@WDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WDR1_5end |
Coexpression cluster: | C4355_Smooth_CD14_Alveolar_Astrocyte_Meningeal_Fibroblast_Renal |
Association with transcript: | 29bp_to_ENST00000499869_5end |
EntrezGene: | WDR1 |
HGNC: | 12754 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.55e-23 | 121 |
embryonic cell | 2.01e-20 | 250 |
electrically responsive cell | 6.93e-14 | 61 |
electrically active cell | 6.93e-14 | 61 |
vascular associated smooth muscle cell | 8.18e-14 | 32 |
smooth muscle cell | 1.08e-13 | 43 |
smooth muscle myoblast | 1.08e-13 | 43 |
muscle cell | 7.44e-13 | 55 |
muscle precursor cell | 7.55e-13 | 58 |
myoblast | 7.55e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.55e-13 | 58 |
endothelial cell | 1.78e-10 | 36 |
meso-epithelial cell | 4.31e-10 | 45 |
lining cell | 6.50e-09 | 58 |
barrier cell | 6.50e-09 | 58 |
endothelial cell of vascular tree | 1.95e-08 | 24 |
epithelial cell of nephron | 1.84e-07 | 15 |
somatic stem cell | 1.85e-07 | 433 |
blood vessel endothelial cell | 1.91e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.91e-07 | 18 |
multi fate stem cell | 1.95e-07 | 427 |
stem cell | 2.23e-07 | 441 |