FFCP PHASE1:Mm9::chr13:44825163..44825176,+: Difference between revisions
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{{FFCP|EntrezGene=16468|HGNC=|MCL_coexpression_id=17|UniProt=G3UXE0|association_with_transcript=0bp_to_ENSMUST00000172830_5end|description=CAGE_peak_18_at_Jarid2_5end|id=chr13:44825163..44825176,+|ontology_enrichment_celltype=CL:0002563!3.41e-07!9;CL:0002251!3.41e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.04e-11,6;CL:0000677,1.04e-11,6;CL:0000584,1.04e-11,6;CL:0000075,4.03e-10,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.01e-11!15;UBERON:0005409!8.78e-11!59;UBERON:0001242!1.54e-10!13;UBERON:0000060!1.54e-10!13;UBERON:0001262!1.54e-10!13;UBERON:0004786!1.54e-10!13;UBERON:0000160!3.85e-09!43;UBERON:0004923!1.63e-07!24;UBERON:0003350!3.41e-07!9;UBERON:0004808!3.41e-07!9;UBERON:0001277!3.41e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.48e-17,15;UBERON:0003101,1.89e-16,16;UBERON:0000079,1.89e-16,16;UBERON:0001242,3.60e-14,13;UBERON:0001262,3.60e-14,13;UBERON:0004786,3.60e-14,13;UBERON:0000473,2.03e-13,14;UBERON:0000344,2.75e-12,15;UBERON:0004176,4.69e-11,17;UBERON:0009196,4.69e-11,17;UBERON:0009117,4.69e-11,17;UBERON:0003133,6.69e-11,24;UBERON:0000991,1.93e-10,18;UBERON:0005564,1.93e-10,18;UBERON:0005156,4.82e-10,26;UBERON:0000990,4.82e-10,26;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9;UBERON:0004923,1.12e-07,24;UBERON:0003886,8.80e-07,38|phase1_expression=0,2.09385244583617,0.454999239389536,2.11724947914781,1.50268718983904,0.16787927191189,0.467225281191051,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.799962113967033,0.22940928106717,0,0.86152399231815,0.646413698057667,1.71021077510736,0.504060259519861,0.886922042621219,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.274462930807229,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.628340120440365,0,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0,1.0108910337347,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0.646703978798527,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0.232236671860439,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0,0,0.538192240565737,0.482443521363367,0,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.712262414669021,0.488660878060728,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,5.07323644815771,0,0,0.583353565032143,0.904118764344118,0.337912250981556,1.17357238645754,0.13020438484395,1.99232754408851,5.31485065817213,2.59227005632079,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p18@Jarid2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16468 | |||
|HGNC= | |||
|MCL_coexpression_id=17 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UXE0 | |||
|association_with_transcript=0bp_to_ENSMUST00000172830_5end | |||
|cluster_id=chr13:44825163..44825176,+ | |||
|description=CAGE_peak_18_at_Jarid2_5end | |||
|id=chr13:44825163..44825176,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.41e-07!9;CL:0002251!3.41e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.04e-11,6;CL:0000677,1.04e-11,6;CL:0000584,1.04e-11,6;CL:0000075,4.03e-10,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.01e-11!15;UBERON:0005409!8.78e-11!59;UBERON:0001242!1.54e-10!13;UBERON:0000060!1.54e-10!13;UBERON:0001262!1.54e-10!13;UBERON:0004786!1.54e-10!13;UBERON:0000160!3.85e-09!43;UBERON:0004923!1.63e-07!24;UBERON:0003350!3.41e-07!9;UBERON:0004808!3.41e-07!9;UBERON:0001277!3.41e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.48e-17,15;UBERON:0003101,1.89e-16,16;UBERON:0000079,1.89e-16,16;UBERON:0001242,3.60e-14,13;UBERON:0001262,3.60e-14,13;UBERON:0004786,3.60e-14,13;UBERON:0000473,2.03e-13,14;UBERON:0000344,2.75e-12,15;UBERON:0004176,4.69e-11,17;UBERON:0009196,4.69e-11,17;UBERON:0009117,4.69e-11,17;UBERON:0003133,6.69e-11,24;UBERON:0000991,1.93e-10,18;UBERON:0005564,1.93e-10,18;UBERON:0005156,4.82e-10,26;UBERON:0000990,4.82e-10,26;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9;UBERON:0004923,1.12e-07,24;UBERON:0003886,8.80e-07,38 | |||
|phase1_expression=0,2.09385244583617,0.454999239389536,2.11724947914781,1.50268718983904,0.16787927191189,0.467225281191051,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.799962113967033,0.22940928106717,0,0.86152399231815,0.646413698057667,1.71021077510736,0.504060259519861,0.886922042621219,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.274462930807229,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.628340120440365,0,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0,1.0108910337347,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0.646703978798527,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0.232236671860439,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0,0,0.538192240565737,0.482443521363367,0,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.712262414669021,0.488660878060728,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,5.07323644815771,0,0,0.583353565032143,0.904118764344118,0.337912250981556,1.17357238645754,0.13020438484395,1.99232754408851,5.31485065817213,2.59227005632079,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p18@Jarid2 | |||
}} |
Revision as of 00:39, 6 August 2015
Short description: | p18@Jarid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Jarid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:17 |
Association with transcript: | 0bp_to_ENSMUST00000172830_5end |
EntrezGene: | 16468 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.04e-11 | 6 |
gut absorptive cell | 1.04e-11 | 6 |
enterocyte | 1.04e-11 | 6 |
columnar/cuboidal epithelial cell | 4.03e-10 | 7 |
intestinal epithelial cell | 5.41e-08 | 9 |
epithelial cell of alimentary canal | 5.41e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.48e-17 | 15 |
male organism | 1.89e-16 | 16 |
male reproductive system | 1.89e-16 | 16 |
intestinal mucosa | 3.60e-14 | 13 |
wall of intestine | 3.60e-14 | 13 |
gastrointestinal system mucosa | 3.60e-14 | 13 |
testis | 2.03e-13 | 14 |
mucosa | 2.75e-12 | 15 |
external genitalia | 4.69e-11 | 17 |
indifferent external genitalia | 4.69e-11 | 17 |
indifferent gonad | 4.69e-11 | 17 |
reproductive organ | 6.69e-11 | 24 |
gonad | 1.93e-10 | 18 |
gonad primordium | 1.93e-10 | 18 |
reproductive structure | 4.82e-10 | 26 |
reproductive system | 4.82e-10 | 26 |
epithelium of mucosa | 5.41e-08 | 9 |
gastrointestinal system epithelium | 5.41e-08 | 9 |
intestinal epithelium | 5.41e-08 | 9 |
organ component layer | 1.12e-07 | 24 |
body cavity precursor | 8.80e-07 | 38 |