FFCP PHASE1:Hg19::chr3:46412429..46412444,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1234 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1606 | |||
|TSSclassifier=strong | |||
|UniProt=P51681 | |||
|association_with_transcript=84bp_to_ENST00000292303_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_CCR5_5end | |||
|id=chr3:46412429..46412444,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.19e-49!140;CL:0002087!2.56e-47!119;CL:0002031!2.08e-45!124;CL:0000037!4.22e-41!172;CL:0000566!4.22e-41!172;CL:0002032!3.84e-38!165;CL:0000837!3.84e-38!165;CL:0000988!1.65e-36!182;CL:0002009!2.29e-35!65;CL:0002194!3.07e-34!63;CL:0000576!3.07e-34!63;CL:0000040!3.07e-34!63;CL:0000559!3.07e-34!63;CL:0000557!1.19e-33!71;CL:0002057!8.58e-33!42;CL:0000766!1.09e-32!76;CL:0000839!1.68e-31!70;CL:0000860!2.22e-29!45;CL:0000763!1.57e-24!112;CL:0000049!1.57e-24!112;CL:0000791!3.51e-13!18;CL:0000789!3.51e-13!18;CL:0002420!3.51e-13!18;CL:0002419!3.51e-13!18;CL:0000790!3.51e-13!18;CL:0000838!1.03e-12!52;CL:0000542!3.07e-12!53;CL:0000051!3.07e-12!53;CL:0000625!7.52e-11!11;CL:0000084!1.32e-10!25;CL:0000827!1.32e-10!25;CL:0000451!6.38e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-38;33!CL:0002057;2.61e-38;33!CL:0000473;1.29e-37;39!CL:0000234;1.29e-37;39!CL:0000576;3.15e-27;48!CL:0000766;5.50e-18;69!CL:0000791;1.03e-15;18!CL:0000789;1.03e-15;18!CL:0002419;1.03e-15;18!CL:0002087;2.10e-15;104!CL:0000625;6.77e-14;11!CL:0000738;1.95e-12;136!CL:0000084;2.55e-11;25!CL:0000763;3.41e-09;100!CL:0000451;6.73e-09;10!CL:0000235;2.90e-08;6!CL:0000988;1.02e-07;177!CL:0000990;4.56e-07;8!CL:0000840;4.83e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.95e-58,136;CL:0002087,2.80e-57,115;CL:0002031,3.62e-52,120;CL:0002009,1.16e-51,61;CL:0002194,3.67e-50,59;CL:0000576,3.67e-50,59;CL:0000040,3.67e-50,59;CL:0000559,3.67e-50,59;CL:0000473,6.36e-49,48;CL:0000234,6.36e-49,48;CL:0000557,7.17e-47,67;CL:0000037,1.25e-44,168;CL:0000766,1.88e-44,72;CL:0000839,8.20e-43,66;CL:0000860,6.32e-42,42;CL:0002057,6.32e-42,42;CL:0002032,1.16e-41,161;CL:0000837,1.16e-41,161;CL:0000988,9.10e-41,177;CL:0000763,1.78e-30,108;CL:0000049,1.78e-30,108;CL:0000791,1.14e-15,18;CL:0000789,1.14e-15,18;CL:0002420,1.14e-15,18;CL:0002419,1.14e-15,18;CL:0000790,1.14e-15,18;CL:0000625,6.88e-14,11;CL:0000084,2.75e-11,25;CL:0000827,2.75e-11,25;CL:0000838,1.73e-10,52;CL:0000542,3.86e-10,53;CL:0000051,3.86e-10,53;CL:0000451,7.21e-09,10;CL:0000235,2.88e-08,6;CL:0000134,3.43e-07,354;CL:0000840,4.30e-07,5;CL:0001029,4.30e-07,5;CL:0000990,4.82e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.89e-31;42!CL:0000790;1.03e-15;18!CL:0000049;3.20e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.63e-40!102;UBERON:0003061!9.63e-40!102;UBERON:0007023!4.73e-36!115;UBERON:0002193!6.25e-36!112;UBERON:0002371!2.35e-30!80;UBERON:0001474!1.54e-26!86;UBERON:0002405!4.55e-23!115;UBERON:0004765!8.44e-20!101;UBERON:0001434!8.44e-20!101;UBERON:0001049!3.06e-10!57;UBERON:0005068!3.06e-10!57;UBERON:0006241!3.06e-10!57;UBERON:0007135!3.06e-10!57;UBERON:0003081!1.19e-09!216;UBERON:0003080!1.75e-08!42;UBERON:0002780!3.52e-08!41;UBERON:0001890!3.52e-08!41;UBERON:0006240!3.52e-08!41;UBERON:0002616!1.71e-07!59;UBERON:0002020!2.77e-07!34;UBERON:0003528!2.77e-07!34;UBERON:0001893!3.82e-07!34;UBERON:0000178!4.00e-07!15;UBERON:0000179!4.00e-07!15;UBERON:0000463!4.00e-07!15;UBERON:0002791!6.98e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-09;15!UBERON:0000179;1.75e-09;15!UBERON:0000463;1.75e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.74e-54,98;UBERON:0003061,7.74e-54,98;UBERON:0002193,1.06e-49,108;UBERON:0002371,1.14e-40,76;UBERON:0002405,1.28e-40,93;UBERON:0001474,3.16e-36,82;UBERON:0004765,2.98e-31,90;UBERON:0001434,3.40e-26,100;UBERON:0003081,7.72e-19,203;UBERON:0007023,1.61e-15,114;UBERON:0002204,7.40e-10,167;UBERON:0000178,1.94e-09,15;UBERON:0000179,1.94e-09,15;UBERON:0000463,1.94e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,4.32700704533794,7.29275856384704,1.54816123316076,0,0,0,0,0,0.293600439334847,2.21598163412751,2.60707781711184,1.30206522429511,15.8979986710346,8.42123531649347,18.2878653020272,39.9845156643803,83.1327076115381,52.1555731553805,72.2854304776679,140.208249815443,139.058160531902,78.8277154962692,125.006424786201,131.484119818053,74.120321358373,150.397931275031,135.426486594342,58.5433675977501,114.347676874237,95.507480889161,75.9088053079838,157.255223267286,108.047974260038,40.2418586227794,101.128074414167,67.7697353346984,127.401855757948,154.896166340681,148.854517509942,97.4844821196164,148.622631749757,131.18206220189,83.5451313634049,223.176247408464,182.915259940831,4.85887158517466,2.97646019951061,4.19317291016752,2.3589012540764,1.50176892841506,1.12507910687956,0,0,0.365328307529268,3.51992488922645,1.09227722252426,0,1.28019066769952,1.60158394814405,0.574752439954483,0.661044872784862,1.90810750907073,0,0,0.382273228125229,0,3.92355994087075,2.37045676297569,0.590129310341499,2.35806457649499,3.08402248499264,35.7779100136051,0,0,1.94826728407911,41.2218690475142,12.0788422064683,19.273448828775,31.9548559242718,40.9892223122161,46.1710683837568,44.7271100521999,37.8599524366612,30.1395209164455,0.14828656316206,0,0,62.2068291409638,24.142891096921,29.5519603115062,23.2778116657943,39.502111376188,56.6442604855084,69.3829992447313,31.4701998872545,45.0512871263553,54.9695196830322,61.7988627834884,64.0479837598416,17.9430001470012,15.5115313554434,8.25499102131954,0,0,0,0,0,0,0,0,0,0,0.175669571386252,2.29213382120997,0,0,32.4547393654683,30.646833764671,24.5972226959901,10.0166062208244,8.00792875092179,10.4008100372278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.8417590592071,33.2286056497718,25.5645599136613,0,0,0,0,0,0,0,0.264145302039678,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.8657500628881,16.5744840172602,46.383466686267,0,0,0,0,0,0,10.3118332474045,11.2307533315099,5.60631694634745,3.33691894327346,0,0,0.773288812777695,0.167516265334349,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,1.07857100409308,5.22965033236877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0.426133137080504,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.97701981631236,0,0,0,0,12.1787426215721,25.2330278356984,11.9625909306574,18.105614934792,23.4476495659131,17.5087794022034,17.8210374288578,19.0350042310625,0.106824071127473,0,0,0,0.144269212976445,0,0,0,4.78763425330917,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0.111443384277478,0,0,0,0,0.994147647766298,1.96937182974718,0,0.16480387422676,0,2.98871982376605,4.69682656402951,0,0,1.96935688737711,0,0,0,5.11572370226872,0.887790650732402,4.7896618469388,0,0,0.834912883456661,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,1.68835014075571,0,0.331737779793674,0.591095237907095,0.87754158861589,0,0,1.53900517007594,0,0,0,0,0.638002319463839,0.274792780205587,1.06606955203727,0,0,0.664846727600626,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,1.68069372556344,0,0,0,0,1.68502832451693,0,0.937057782901357,0,0,0,0.394584402849391,0,0,2.14834370736859,0.150323419414493,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,1.16386819786103,0,0.225980740780532,0,0,0.379864775735272,0.195551382734803,0,3.62870091056899,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.28572909340783,1.27746588066972,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,1.0896272488926,0,0,0,2.69968669861801,1.5476039091159,0.607495566580247,0,1.26089131678717,0.209818352539992,0,0,0,2.85878130549347,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,1.42211251997706,1.98348902614035,0,0,3.41719720216623,0.78602152549833,7.87054205159671,6.94632430536731,0.395223263795889,0,0,0,0,0.306345576763462,0,0,0.886068179966986,1.09823638411767,1.1267183763585,0,1.77486482458964,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,1.36402216187572,1.19578356282027,0,0,0,0,9.99936979274649,0,6.71638420677181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,1.41696576325585,1.27707087245721,0.205116364240755,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,1.65462722368366,0,0.781514011233092,0,0,0,0.405225507710368,0.781078098613847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| |||
|short_description=p1@CCR5 | |||
}} |
Revision as of 18:37, 21 January 2014
Short description: | p1@CCR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCR5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 84bp_to_ENST00000292303_5end |
EntrezGene: | CCR5 |
HGNC: | 1606 |
UniProt: | P51681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.74e-54 | 98 |
blood island | 7.74e-54 | 98 |
hemolymphoid system | 1.06e-49 | 108 |
bone marrow | 1.14e-40 | 76 |
immune system | 1.28e-40 | 93 |
bone element | 3.16e-36 | 82 |
skeletal element | 2.98e-31 | 90 |
skeletal system | 3.40e-26 | 100 |
lateral plate mesoderm | 7.72e-19 | 203 |
adult organism | 1.61e-15 | 114 |
musculoskeletal system | 7.40e-10 | 167 |
blood | 1.94e-09 | 15 |
haemolymphatic fluid | 1.94e-09 | 15 |
organism substance | 1.94e-09 | 15 |