FFCP PHASE1:Mm9::chr13:24695737..24695755,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=76024|HGNC=|MCL_coexpression_id=40|UniProt=|association_with_transcript=352bp_to_uc007pvy.2_5end|description=CAGE_peak_2_at_Gm11346_5end|id=chr13:24695737..24695755,-|ontology_enrichment_celltype=CL:0000791!3.11e-13!9;CL:0000789!3.11e-13!9;CL:0002420!3.11e-13!9;CL:0002419!3.11e-13!9;CL:0000790!3.11e-13!9;CL:0002031!8.69e-13!25;CL:0000553!3.77e-12!6;CL:0000556!3.77e-12!6;CL:0000624!2.24e-11!8;CL:0000084!1.60e-10!11;CL:0000827!1.60e-10!11;CL:0000838!1.65e-09!12;CL:0000988!3.39e-09!32;CL:0002032!3.39e-09!32;CL:0000037!3.39e-09!32;CL:0000566!3.39e-09!32;CL:0000837!3.39e-09!32;CL:0000542!1.19e-08!13;CL:0000051!1.19e-08!13;CL:0000893!8.56e-08!6;CL:0002489!8.56e-08!6;CL:0000898!8.56e-08!6;CL:0000809!8.56e-08!6;CL:0000810!8.56e-08!6;CL:0000895!8.56e-08!6;CL:0000808!8.56e-08!6;CL:0000894!8.56e-08!6;CL:0000806!8.56e-08!6;CL:0000807!8.56e-08!6;CL:0000805!8.56e-08!6;CL:0002425!8.56e-08!6;CL:0002436!8.56e-08!6;CL:0002427!8.56e-08!6;CL:0002428!8.56e-08!6;CL:0002429!8.56e-08!6;CL:0002433!8.56e-08!6;CL:0002431!8.56e-08!6;CL:0002432!8.56e-08!6;CL:0000050!8.88e-08!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.99e-20,9;CL:0000789,2.99e-20,9;CL:0002420,2.99e-20,9;CL:0002419,2.99e-20,9;CL:0000790,2.99e-20,9;CL:0000084,1.15e-16,11;CL:0000827,1.15e-16,11;CL:0002031,5.20e-16,25;CL:0000838,2.57e-15,12;CL:0000542,3.55e-14,13;CL:0000051,3.55e-14,13;CL:0000624,2.64e-13,8;CL:0000988,1.55e-12,32;CL:0002032,1.55e-12,32;CL:0000037,1.55e-12,32;CL:0000837,1.55e-12,32;CL:0000815,2.01e-12,1;CL:0000792,2.01e-12,1;CL:0000625,2.59e-12,1;CL:0000738,6.06e-11,17;CL:0002087,6.06e-11,17;CL:0002320,9.82e-09,46;CL:0000134,9.82e-09,46;CL:0000893,1.75e-08,6;CL:0002489,1.75e-08,6;CL:0000898,1.75e-08,6;CL:0000809,1.75e-08,6;CL:0000810,1.75e-08,6;CL:0000895,1.75e-08,6;CL:0000808,1.75e-08,6;CL:0000894,1.75e-08,6;CL:0000806,1.75e-08,6;CL:0000807,1.75e-08,6;CL:0000805,1.75e-08,6;CL:0002425,1.75e-08,6;CL:0002436,1.75e-08,6;CL:0002427,1.75e-08,6;CL:0002428,1.75e-08,6;CL:0002429,1.75e-08,6;CL:0002433,1.75e-08,6;CL:0002431,1.75e-08,6;CL:0002432,1.75e-08,6;CL:0000553,3.41e-08,6;CL:0000556,3.41e-08,6;CL:0000219,1.94e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.33e-26!48;UBERON:0002390!1.82e-26!45;UBERON:0003061!1.82e-26!45;UBERON:0004177!1.03e-25!29;UBERON:0000065!2.19e-21!41;UBERON:0002370!2.39e-21!23;UBERON:0000974!2.39e-21!23;UBERON:0004807!2.39e-21!23;UBERON:0005058!2.39e-21!23;UBERON:0003351!2.39e-21!23;UBERON:0009113!2.39e-21!23;UBERON:0003295!2.39e-21!23;UBERON:0009722!2.39e-21!23;UBERON:0005562!2.39e-21!23;UBERON:0007690!2.39e-21!23;UBERON:0001004!1.02e-20!42;UBERON:0006562!2.93e-20!24;UBERON:0003408!2.93e-20!24;UBERON:0001557!2.93e-20!24;UBERON:0001042!2.93e-20!24;UBERON:0008814!2.93e-20!24;UBERON:0009145!2.93e-20!24;UBERON:0003081!1.27e-17!88;UBERON:0000072!1.76e-17!27;UBERON:0002405!8.50e-16!70;UBERON:0000063!2.00e-12!35;UBERON:0005057!4.27e-12!51;UBERON:0001041!1.85e-10!92;UBERON:0005911!4.19e-10!69;UBERON:0000926!4.46e-10!193;UBERON:0004120!4.46e-10!193;UBERON:0006603!4.46e-10!193;UBERON:0000077!1.53e-09!97;UBERON:0001048!1.66e-09!147;UBERON:0000477!2.42e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.53e-12,1;UBERON:0001097,5.53e-12,1;UBERON:0003968,5.53e-12,1;UBERON:0001467,5.53e-12,1;UBERON:0002384,9.82e-09,46;UBERON:0002193,2.92e-08,48;UBERON:0002405,2.92e-08,48|phase1_expression=0,0,0,0,0,0,0,5.93967287831251,0.281577444303333,0.234064526321993,0,0.0797721589953364,8.04643430676667,7.86783621770977,0.333109761815663,0.607425802169478,0.699561878128147,2.5236973228659,2.33094537129756,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.565105371014073,0.410082683163076,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.504130925684203,0.292373642219257,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Gm11346}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76024 | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=352bp_to_uc007pvy.2_5end | |||
|cluster_id=chr13:24695737..24695755,- | |||
|description=CAGE_peak_2_at_Gm11346_5end | |||
|id=chr13:24695737..24695755,- | |||
|ontology_enrichment_celltype=CL:0000791!3.11e-13!9;CL:0000789!3.11e-13!9;CL:0002420!3.11e-13!9;CL:0002419!3.11e-13!9;CL:0000790!3.11e-13!9;CL:0002031!8.69e-13!25;CL:0000553!3.77e-12!6;CL:0000556!3.77e-12!6;CL:0000624!2.24e-11!8;CL:0000084!1.60e-10!11;CL:0000827!1.60e-10!11;CL:0000838!1.65e-09!12;CL:0000988!3.39e-09!32;CL:0002032!3.39e-09!32;CL:0000037!3.39e-09!32;CL:0000566!3.39e-09!32;CL:0000837!3.39e-09!32;CL:0000542!1.19e-08!13;CL:0000051!1.19e-08!13;CL:0000893!8.56e-08!6;CL:0002489!8.56e-08!6;CL:0000898!8.56e-08!6;CL:0000809!8.56e-08!6;CL:0000810!8.56e-08!6;CL:0000895!8.56e-08!6;CL:0000808!8.56e-08!6;CL:0000894!8.56e-08!6;CL:0000806!8.56e-08!6;CL:0000807!8.56e-08!6;CL:0000805!8.56e-08!6;CL:0002425!8.56e-08!6;CL:0002436!8.56e-08!6;CL:0002427!8.56e-08!6;CL:0002428!8.56e-08!6;CL:0002429!8.56e-08!6;CL:0002433!8.56e-08!6;CL:0002431!8.56e-08!6;CL:0002432!8.56e-08!6;CL:0000050!8.88e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.99e-20,9;CL:0000789,2.99e-20,9;CL:0002420,2.99e-20,9;CL:0002419,2.99e-20,9;CL:0000790,2.99e-20,9;CL:0000084,1.15e-16,11;CL:0000827,1.15e-16,11;CL:0002031,5.20e-16,25;CL:0000838,2.57e-15,12;CL:0000542,3.55e-14,13;CL:0000051,3.55e-14,13;CL:0000624,2.64e-13,8;CL:0000988,1.55e-12,32;CL:0002032,1.55e-12,32;CL:0000037,1.55e-12,32;CL:0000837,1.55e-12,32;CL:0000815,2.01e-12,1;CL:0000792,2.01e-12,1;CL:0000625,2.59e-12,1;CL:0000738,6.06e-11,17;CL:0002087,6.06e-11,17;CL:0002320,9.82e-09,46;CL:0000134,9.82e-09,46;CL:0000893,1.75e-08,6;CL:0002489,1.75e-08,6;CL:0000898,1.75e-08,6;CL:0000809,1.75e-08,6;CL:0000810,1.75e-08,6;CL:0000895,1.75e-08,6;CL:0000808,1.75e-08,6;CL:0000894,1.75e-08,6;CL:0000806,1.75e-08,6;CL:0000807,1.75e-08,6;CL:0000805,1.75e-08,6;CL:0002425,1.75e-08,6;CL:0002436,1.75e-08,6;CL:0002427,1.75e-08,6;CL:0002428,1.75e-08,6;CL:0002429,1.75e-08,6;CL:0002433,1.75e-08,6;CL:0002431,1.75e-08,6;CL:0002432,1.75e-08,6;CL:0000553,3.41e-08,6;CL:0000556,3.41e-08,6;CL:0000219,1.94e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.33e-26!48;UBERON:0002390!1.82e-26!45;UBERON:0003061!1.82e-26!45;UBERON:0004177!1.03e-25!29;UBERON:0000065!2.19e-21!41;UBERON:0002370!2.39e-21!23;UBERON:0000974!2.39e-21!23;UBERON:0004807!2.39e-21!23;UBERON:0005058!2.39e-21!23;UBERON:0003351!2.39e-21!23;UBERON:0009113!2.39e-21!23;UBERON:0003295!2.39e-21!23;UBERON:0009722!2.39e-21!23;UBERON:0005562!2.39e-21!23;UBERON:0007690!2.39e-21!23;UBERON:0001004!1.02e-20!42;UBERON:0006562!2.93e-20!24;UBERON:0003408!2.93e-20!24;UBERON:0001557!2.93e-20!24;UBERON:0001042!2.93e-20!24;UBERON:0008814!2.93e-20!24;UBERON:0009145!2.93e-20!24;UBERON:0003081!1.27e-17!88;UBERON:0000072!1.76e-17!27;UBERON:0002405!8.50e-16!70;UBERON:0000063!2.00e-12!35;UBERON:0005057!4.27e-12!51;UBERON:0001041!1.85e-10!92;UBERON:0005911!4.19e-10!69;UBERON:0000926!4.46e-10!193;UBERON:0004120!4.46e-10!193;UBERON:0006603!4.46e-10!193;UBERON:0000077!1.53e-09!97;UBERON:0001048!1.66e-09!147;UBERON:0000477!2.42e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.53e-12,1;UBERON:0001097,5.53e-12,1;UBERON:0003968,5.53e-12,1;UBERON:0001467,5.53e-12,1;UBERON:0002384,9.82e-09,46;UBERON:0002193,2.92e-08,48;UBERON:0002405,2.92e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,5.93967287831251,0.281577444303333,0.234064526321993,0,0.0797721589953364,8.04643430676667,7.86783621770977,0.333109761815663,0.607425802169478,0.699561878128147,2.5236973228659,2.33094537129756,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.565105371014073,0.410082683163076,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.504130925684203,0.292373642219257,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Gm11346 | |||
}} |
Revision as of 20:04, 5 August 2015
Short description: | p2@Gm11346 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm11346_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | 352bp_to_uc007pvy.2_5end |
EntrezGene: | 76024 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 5.53e-12 | 1 |
axillary lymph node | 5.53e-12 | 1 |
peripheral lymph node | 5.53e-12 | 1 |
shoulder | 5.53e-12 | 1 |
connective tissue | 9.82e-09 | 46 |
hemolymphoid system | 2.92e-08 | 48 |
immune system | 2.92e-08 | 48 |