FFCP PHASE1:Mm9::chr12:80309915..80309926,+: Difference between revisions
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{{FFCP|EntrezGene=77974|HGNC=|MCL_coexpression_id=3|UniProt=Q8BYK4|association_with_transcript=0bp_to_ENSMUST00000122227_5end|description=CAGE_peak_2_at_Rdh12_5end|id=chr12:80309915..80309926,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000197,8.88e-07,2;CL:0002491,8.88e-07,2;CL:0000098,8.88e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-10,3;DOID:4045,1.03e-10,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.78e-10,5;UBERON:0001003,8.78e-10,5;UBERON:0002097,8.78e-10,5;UBERON:0002199,8.78e-10,5;UBERON:0007029,8.78e-10,5;UBERON:0007376,8.78e-10,5;UBERON:0002416,8.78e-10,5;UBERON:0007383,8.78e-10,5;UBERON:0003102,1.89e-09,22;UBERON:0007524,5.05e-07,11;UBERON:0003077,5.05e-07,11;UBERON:0007285,5.05e-07,11;UBERON:0000058,7.95e-07,7;UBERON:0004766,8.88e-07,2;UBERON:0008193,8.88e-07,2;UBERON:0005913,8.88e-07,2;UBERON:0011158,8.88e-07,2;UBERON:0005744,8.88e-07,2;UBERON:0003457,8.88e-07,2;UBERON:0008001,8.88e-07,2;UBERON:0007497,8.88e-07,2;UBERON:0009955,8.88e-07,2;UBERON:0003067,8.88e-07,2;UBERON:0002546,8.88e-07,2;UBERON:0007914,8.88e-07,2;UBERON:0005253,8.88e-07,2;UBERON:0002227,8.88e-07,2;UBERON:0001846,8.88e-07,2;UBERON:0004339,8.88e-07,2;UBERON:0002105,8.88e-07,2;UBERON:0001678,8.88e-07,2;UBERON:0003128,8.88e-07,2;UBERON:0001694,8.88e-07,2;UBERON:0004681,8.88e-07,2;UBERON:0001839,8.88e-07,2;UBERON:0001690,8.88e-07,2;UBERON:0001844,8.88e-07,2;UBERON:0001849,8.88e-07,2;UBERON:0002499,8.88e-07,2;UBERON:0001855,8.88e-07,2;UBERON:0011137,8.88e-07,2;UBERON:0001703,8.88e-07,2;UBERON:0010323,8.88e-07,2;UBERON:0003129,8.88e-07,2;UBERON:0003069,8.88e-07,2;UBERON:0003051,8.88e-07,2;UBERON:0004637,8.88e-07,2;UBERON:0004761,8.88e-07,2;UBERON:0010113,8.88e-07,2;UBERON:0009123,8.88e-07,2;UBERON:0010351,8.88e-07,2;UBERON:0009617,8.88e-07,2;UBERON:0005641,8.88e-07,2;UBERON:0010349,8.88e-07,2|phase1_expression=2.08193501236232,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.342401459862411,0,0.666219523631325,0,0,0.473193248037357,0.548457734422955,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,26.7860243671621,19.533383613095,18.3233310390829,22.3527965451785,21.1744100337118,23.3044969454954,0,0,0,0,0,0.219686182734472,0,0,0,0.503347818173209,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.558365998002762,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,1.10420759230197,0,0,0,0,0.255457055208591,0,0.599902730993408,0.127070227073065,0,0,0,0.347648640384553,0,0,0.162241263067758,0.203678727700633,0.373220911830279,1.51633655060205,6.10281382070775,0.130120442962704,0,0,0.150704817835715,0,0.384341160854549,0.655912071918102,24.0594134787285,0,0,0,0.876782929710299,1.11218899690239,0.348252166522167,1.85203922767149,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0,0.228497025219458,0,0,0,0.140271639780637,0.126473074248515,0.590440591918409,0.470996183524124,0,0,0,0,0,0,0.72353147925725,1.01850340712568,0.287696137450811,0.486405680325106,0.549122826376163,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0,0,0.35163505977661,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0.63549621259146,0,1.81374878235628,2.09903754704677,1.26657142349127,2.74556391207214,0.984845398470368,0,0.370850604021019,0.341741761595705,0,0.555583582109135,0,0.136694227721025,0.228778173206523,0.509935289981566,0.279902904647316,0.829199842826543,1.90934123603023,0.316335993581135,0,1.40406943068342,2.29997125615916,0.436725127492355,1.48350781023303,0.826534557253359,1.83229159388821,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0.39736270956253,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,2.49403421976732,0,0,0,0.386379188064381,3.19060208267009,0,2.78678892802786,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0.25384382367503,0,0,0.407412341537585,0,0,0,0.818462086339379,0.309873682371932,0.578719832943424,0.499621155875892,1.16965804222704,1.07435527024149,0.191288332068843,0.441182838239031,0|short_description=p2@Rdh12}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77974 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BYK4 | |||
|association_with_transcript=0bp_to_ENSMUST00000122227_5end | |||
|cluster_id=chr12:80309915..80309926,+ | |||
|description=CAGE_peak_2_at_Rdh12_5end | |||
|id=chr12:80309915..80309926,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.88e-07,2;CL:0002491,8.88e-07,2;CL:0000098,8.88e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-10,3;DOID:4045,1.03e-10,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.78e-10,5;UBERON:0001003,8.78e-10,5;UBERON:0002097,8.78e-10,5;UBERON:0002199,8.78e-10,5;UBERON:0007029,8.78e-10,5;UBERON:0007376,8.78e-10,5;UBERON:0002416,8.78e-10,5;UBERON:0007383,8.78e-10,5;UBERON:0003102,1.89e-09,22;UBERON:0007524,5.05e-07,11;UBERON:0003077,5.05e-07,11;UBERON:0007285,5.05e-07,11;UBERON:0000058,7.95e-07,7;UBERON:0004766,8.88e-07,2;UBERON:0008193,8.88e-07,2;UBERON:0005913,8.88e-07,2;UBERON:0011158,8.88e-07,2;UBERON:0005744,8.88e-07,2;UBERON:0003457,8.88e-07,2;UBERON:0008001,8.88e-07,2;UBERON:0007497,8.88e-07,2;UBERON:0009955,8.88e-07,2;UBERON:0003067,8.88e-07,2;UBERON:0002546,8.88e-07,2;UBERON:0007914,8.88e-07,2;UBERON:0005253,8.88e-07,2;UBERON:0002227,8.88e-07,2;UBERON:0001846,8.88e-07,2;UBERON:0004339,8.88e-07,2;UBERON:0002105,8.88e-07,2;UBERON:0001678,8.88e-07,2;UBERON:0003128,8.88e-07,2;UBERON:0001694,8.88e-07,2;UBERON:0004681,8.88e-07,2;UBERON:0001839,8.88e-07,2;UBERON:0001690,8.88e-07,2;UBERON:0001844,8.88e-07,2;UBERON:0001849,8.88e-07,2;UBERON:0002499,8.88e-07,2;UBERON:0001855,8.88e-07,2;UBERON:0011137,8.88e-07,2;UBERON:0001703,8.88e-07,2;UBERON:0010323,8.88e-07,2;UBERON:0003129,8.88e-07,2;UBERON:0003069,8.88e-07,2;UBERON:0003051,8.88e-07,2;UBERON:0004637,8.88e-07,2;UBERON:0004761,8.88e-07,2;UBERON:0010113,8.88e-07,2;UBERON:0009123,8.88e-07,2;UBERON:0010351,8.88e-07,2;UBERON:0009617,8.88e-07,2;UBERON:0005641,8.88e-07,2;UBERON:0010349,8.88e-07,2 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.342401459862411,0,0.666219523631325,0,0,0.473193248037357,0.548457734422955,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,26.7860243671621,19.533383613095,18.3233310390829,22.3527965451785,21.1744100337118,23.3044969454954,0,0,0,0,0,0.219686182734472,0,0,0,0.503347818173209,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.558365998002762,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,1.10420759230197,0,0,0,0,0.255457055208591,0,0.599902730993408,0.127070227073065,0,0,0,0.347648640384553,0,0,0.162241263067758,0.203678727700633,0.373220911830279,1.51633655060205,6.10281382070775,0.130120442962704,0,0,0.150704817835715,0,0.384341160854549,0.655912071918102,24.0594134787285,0,0,0,0.876782929710299,1.11218899690239,0.348252166522167,1.85203922767149,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0,0.228497025219458,0,0,0,0.140271639780637,0.126473074248515,0.590440591918409,0.470996183524124,0,0,0,0,0,0,0.72353147925725,1.01850340712568,0.287696137450811,0.486405680325106,0.549122826376163,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0,0,0.35163505977661,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0.63549621259146,0,1.81374878235628,2.09903754704677,1.26657142349127,2.74556391207214,0.984845398470368,0,0.370850604021019,0.341741761595705,0,0.555583582109135,0,0.136694227721025,0.228778173206523,0.509935289981566,0.279902904647316,0.829199842826543,1.90934123603023,0.316335993581135,0,1.40406943068342,2.29997125615916,0.436725127492355,1.48350781023303,0.826534557253359,1.83229159388821,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0.39736270956253,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,2.49403421976732,0,0,0,0.386379188064381,3.19060208267009,0,2.78678892802786,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0.25384382367503,0,0,0.407412341537585,0,0,0,0.818462086339379,0.309873682371932,0.578719832943424,0.499621155875892,1.16965804222704,1.07435527024149,0.191288332068843,0.441182838239031,0 | |||
|short_description=p2@Rdh12 | |||
}} |
Revision as of 07:42, 5 August 2015
Short description: | p2@Rdh12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rdh12_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000122227_5end |
EntrezGene: | 77974 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.88e-07 | 2 |
auditory epithelial cell | 8.88e-07 | 2 |
sensory epithelial cell | 8.88e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.03e-10 | 3 |
muscle cancer | 1.03e-10 | 3 |