FFCP PHASE1:Hg19::chr3:188889737..188889767,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285386 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24759 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZUI0 | |||
|association_with_transcript=0bp_to_ENST00000345063,NM_198485,uc003frw.1_5end | |||
|coexpression_cluster_id=C629 | |||
|description=CAGE_peak_4_at_TPRG1_5end | |||
|id=chr3:188889737..188889767,+ | |||
|ontology_enrichment_celltype=CL:0002623!4.62e-10!3;CL:0000575!2.60e-07!2;CL:0002537!9.19e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.37e-15;5!CL:0000349;4.62e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.61e-15,5;CL:0000349,4.77e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.43e-10;1!UBERON:0000358;2.88e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!5.46e-11!10;UBERON:0001004!9.26e-11!72;UBERON:0000166!1.24e-10!21;UBERON:0001044!1.70e-08!6;UBERON:0003293!1.70e-08!6;UBERON:0003294!1.70e-08!6;UBERON:0010047!1.70e-08!6;UBERON:0000167!1.70e-08!6;UBERON:0001042!2.05e-08!10;UBERON:0009145!2.05e-08!10;UBERON:0000078!6.14e-08!18;UBERON:0006562!1.31e-07!11;UBERON:0000165!1.51e-07!28;UBERON:0000930!1.51e-07!28;UBERON:0003127!2.68e-07!2;UBERON:0000065!4.28e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.47e-17;2!UBERON:0005058;6.47e-17;2!UBERON:0009113;6.47e-17;2!UBERON:0005631;2.68e-13;10!UBERON:0000158;2.68e-13;10!UBERON:0001723;5.72e-12;3!UBERON:0001033;5.72e-12;3!UBERON:0000305;4.03e-11;7!UBERON:0002372;1.03e-09;1!UBERON:0001961;1.03e-09;1!UBERON:0001744;1.03e-09;1!UBERON:0001042;1.03e-09;1!UBERON:0001735;1.03e-09;1!UBERON:0005795;1.32e-09;1!UBERON:0007029;1.84e-09;1!UBERON:0000478;2.61e-08;24!UBERON:0004177;2.68e-07;5!UBERON:0005057;2.68e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001042,2.82e-20,10;UBERON:0009145,2.82e-20,10;UBERON:0006562,2.00e-18,11;UBERON:0001723,5.72e-12,3;UBERON:0001033,5.72e-12,3;UBERON:0010056,5.72e-12,3;UBERON:0000305,4.32e-11,7;UBERON:0001557,1.32e-10,19;UBERON:0004871,9.11e-10,8;UBERON:0002372,1.03e-09,1;UBERON:0001961,1.03e-09,1;UBERON:0001744,1.03e-09,1;UBERON:0001735,1.03e-09,1;UBERON:0005631,1.59e-09,14;UBERON:0000158,1.59e-09,14;UBERON:0007029,1.69e-09,1;UBERON:0002370,5.97e-09,4;UBERON:0005058,5.97e-09,4;UBERON:0009113,5.97e-09,4;UBERON:0003295,5.97e-09,4;UBERON:0005562,5.97e-09,4;UBERON:0000478,2.71e-08,24;UBERON:0000974,7.78e-08,10;UBERON:0003408,8.95e-08,10;UBERON:0008814,2.10e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,2.17342444007882,0,0.473447805734733,1.94826728407911,0.557052284425868,1.47302953737419,1.55073726208535,1.89562704635511,0.896639238079726,0.390178042679635,0,0,0,0.14828656316206,1.07016331235885,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,21.2482591416544,1.18785872333055,26.1086596784347,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67308493134324,7.9258766258911,0,0,0,0,4.78501739597879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,20.9496275614986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.6828739083758,4.14755797088455,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2352311312471,0,3.1648565819643,2.42091385753846,0,0,0,11.103554142745,5.4757328173645,14.8848037162238,3.01233262649241,0.332660356546013,0,0,0,0,2.34640942403454,0.366724332548599,9.76550827957772,0,0.603821380773079,0 | |||
|short_description=p4@TPRG1 | |||
}} |
Revision as of 23:15, 21 January 2014
Short description: | p4@TPRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TPRG1_5end |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | 0bp_to_ENST00000345063, NM_198485, uc003frw.1_5end |
EntrezGene: | TPRG1 |
HGNC: | 24759 |
UniProt: | Q6ZUI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.61e-15 | 5 |
extraembryonic cell | 4.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chordate pharynx | 2.82e-20 | 10 |
pharyngeal region of foregut | 2.82e-20 | 10 |
pharynx | 2.00e-18 | 11 |
tongue | 5.72e-12 | 3 |
gustatory system | 5.72e-12 | 3 |
future tongue | 5.72e-12 | 3 |
amnion | 4.32e-11 | 7 |
upper respiratory tract | 1.32e-10 | 19 |
somatic layer of lateral plate mesoderm | 9.11e-10 | 8 |
tonsil | 1.03e-09 | 1 |
mucosa-associated lymphoid tissue | 1.03e-09 | 1 |
lymphoid tissue | 1.03e-09 | 1 |
tonsillar ring | 1.03e-09 | 1 |
extraembryonic membrane | 1.59e-09 | 14 |
membranous layer | 1.59e-09 | 14 |
surface | 1.69e-09 | 1 |
thymus | 5.97e-09 | 4 |
hemolymphoid system gland | 5.97e-09 | 4 |
thymic region | 5.97e-09 | 4 |
pharyngeal gland | 5.97e-09 | 4 |
thymus primordium | 5.97e-09 | 4 |
extraembryonic structure | 2.71e-08 | 24 |
neck | 7.78e-08 | 10 |
gland of gut | 8.95e-08 | 10 |
pharyngeal arch system | 2.10e-07 | 18 |