FFCP PHASE1:Mm9::chr12:25367561..25367565,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=479|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:25367561..25367565,+|id=chr12:25367561..25367565,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.84e-08,1;CL:0002078,1.84e-08,1;CL:0000115,1.84e-08,1;CL:0002262,1.84e-08,1;CL:1000398,1.84e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!2.62e-17!14;UBERON:0003918!2.62e-17!14;UBERON:0005095!2.62e-17!14;UBERON:0007687!2.62e-17!14;UBERON:0006554!9.85e-15!16;UBERON:0001008!1.13e-13!17;UBERON:0005177!4.04e-13!85;UBERON:0005172!3.34e-12!49;UBERON:0005173!3.34e-12!49;UBERON:0002417!3.34e-12!49;UBERON:0000916!3.34e-12!49;UBERON:0000489!1.84e-10!21;UBERON:0002100!2.90e-10!98;UBERON:0009569!3.01e-10!66|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-38,14;UBERON:0003918,1.86e-38,14;UBERON:0011143,1.86e-38,14;UBERON:0005095,1.86e-38,14;UBERON:0007687,1.86e-38,14;UBERON:0006554,9.05e-30,18;UBERON:0001008,3.62e-28,19;UBERON:0000489,2.03e-25,21;UBERON:0005172,8.97e-16,49;UBERON:0005173,8.97e-16,49;UBERON:0002417,8.97e-16,49;UBERON:0000916,8.97e-16,49;UBERON:0003104,1.85e-12,61;UBERON:0009142,1.85e-12,61;UBERON:0003103,5.19e-12,43;UBERON:0009569,1.98e-11,66;UBERON:0005177,2.33e-09,79;UBERON:0002394,1.84e-08,1;UBERON:0001281,1.84e-08,1;UBERON:0000353,1.84e-08,1;UBERON:0003497,1.84e-08,1;UBERON:0003909,1.84e-08,1;UBERON:0003928,1.84e-08,1;UBERON:0003835,1.84e-08,1;UBERON:0003513,1.84e-08,1;UBERON:0001280,1.84e-08,1;UBERON:0004647,1.84e-08,1;UBERON:0002294,1.84e-08,1;UBERON:0001173,1.84e-08,1;UBERON:0004912,1.84e-08,1;UBERON:0005171,1.84e-08,1;UBERON:0006834,2.98e-08,1;UBERON:0002100,4.55e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08715426273523,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,1.25673363870702,2.25415471346161,2.03651327845314,2.32742984601151,2.10407459670956,3.28829993046138,5.75679577120448,6.43694784149637,4.56569506510662,0.592905254174298,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.538192240565737,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94133198447482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0,0.952587382566147,0,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0,0,0,0|short_description=p@chr12:25367561..25367565,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=479 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:25367561..25367565,+ | |||
|description=CAGE_peak_at_chr12:25367561..25367565,+ | |||
|id=chr12:25367561..25367565,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.84e-08,1;CL:0002078,1.84e-08,1;CL:0000115,1.84e-08,1;CL:0002262,1.84e-08,1;CL:1000398,1.84e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.62e-17!14;UBERON:0003918!2.62e-17!14;UBERON:0005095!2.62e-17!14;UBERON:0007687!2.62e-17!14;UBERON:0006554!9.85e-15!16;UBERON:0001008!1.13e-13!17;UBERON:0005177!4.04e-13!85;UBERON:0005172!3.34e-12!49;UBERON:0005173!3.34e-12!49;UBERON:0002417!3.34e-12!49;UBERON:0000916!3.34e-12!49;UBERON:0000489!1.84e-10!21;UBERON:0002100!2.90e-10!98;UBERON:0009569!3.01e-10!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-38,14;UBERON:0003918,1.86e-38,14;UBERON:0011143,1.86e-38,14;UBERON:0005095,1.86e-38,14;UBERON:0007687,1.86e-38,14;UBERON:0006554,9.05e-30,18;UBERON:0001008,3.62e-28,19;UBERON:0000489,2.03e-25,21;UBERON:0005172,8.97e-16,49;UBERON:0005173,8.97e-16,49;UBERON:0002417,8.97e-16,49;UBERON:0000916,8.97e-16,49;UBERON:0003104,1.85e-12,61;UBERON:0009142,1.85e-12,61;UBERON:0003103,5.19e-12,43;UBERON:0009569,1.98e-11,66;UBERON:0005177,2.33e-09,79;UBERON:0002394,1.84e-08,1;UBERON:0001281,1.84e-08,1;UBERON:0000353,1.84e-08,1;UBERON:0003497,1.84e-08,1;UBERON:0003909,1.84e-08,1;UBERON:0003928,1.84e-08,1;UBERON:0003835,1.84e-08,1;UBERON:0003513,1.84e-08,1;UBERON:0001280,1.84e-08,1;UBERON:0004647,1.84e-08,1;UBERON:0002294,1.84e-08,1;UBERON:0001173,1.84e-08,1;UBERON:0004912,1.84e-08,1;UBERON:0005171,1.84e-08,1;UBERON:0006834,2.98e-08,1;UBERON:0002100,4.55e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08715426273523,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,1.25673363870702,2.25415471346161,2.03651327845314,2.32742984601151,2.10407459670956,3.28829993046138,5.75679577120448,6.43694784149637,4.56569506510662,0.592905254174298,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.538192240565737,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94133198447482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0,0.952587382566147,0,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr12:25367561..25367565,+ | |||
}} |
Latest revision as of 22:07, 4 August 2015
Short description: | p@chr12:25367561..25367565, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:25367561..25367565, + |
Coexpression cluster: | MCL_coexpression_mm9:479 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.84e-08 | 1 |
meso-epithelial cell | 1.84e-08 | 1 |
endothelial cell | 1.84e-08 | 1 |
endothelial cell of sinusoid | 1.84e-08 | 1 |
endothelial cell of hepatic sinusoid | 1.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.86e-38 | 14 |
kidney mesenchyme | 1.86e-38 | 14 |
upper urinary tract | 1.86e-38 | 14 |
kidney rudiment | 1.86e-38 | 14 |
kidney field | 1.86e-38 | 14 |
urinary system structure | 9.05e-30 | 18 |
renal system | 3.62e-28 | 19 |
cavitated compound organ | 2.03e-25 | 21 |
abdomen element | 8.97e-16 | 49 |
abdominal segment element | 8.97e-16 | 49 |
abdominal segment of trunk | 8.97e-16 | 49 |
abdomen | 8.97e-16 | 49 |
mesenchyme | 1.85e-12 | 61 |
entire embryonic mesenchyme | 1.85e-12 | 61 |
compound organ | 5.19e-12 | 43 |
subdivision of trunk | 1.98e-11 | 66 |
trunk region element | 2.33e-09 | 79 |
bile duct | 1.84e-08 | 1 |
hepatic sinusoid | 1.84e-08 | 1 |
parenchyma | 1.84e-08 | 1 |
abdomen blood vessel | 1.84e-08 | 1 |
sinusoid | 1.84e-08 | 1 |
digestive system duct | 1.84e-08 | 1 |
abdominal segment blood vessel | 1.84e-08 | 1 |
trunk blood vessel | 1.84e-08 | 1 |
liver parenchyma | 1.84e-08 | 1 |
liver lobule | 1.84e-08 | 1 |
biliary system | 1.84e-08 | 1 |
biliary tree | 1.84e-08 | 1 |
biliary bud | 1.84e-08 | 1 |
hepatic duct | 1.84e-08 | 1 |
uterus or analog | 2.98e-08 | 1 |
trunk | 4.55e-08 | 90 |