FFCP PHASE1:Mm9::chr12:120476420..120476474,-: Difference between revisions
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{{FFCP|EntrezGene=320910|HGNC=|MCL_coexpression_id=931|UniProt=Q0VBD0|association_with_transcript=274bp_to_NM_177290,uc007pik.1,uc007pil.1,uc007pim.1,uc011yvv.1_5end|description=CAGE_peak_2_at_Itgb8_5end|id=chr12:120476420..120476474,-|ontology_enrichment_celltype=CL:0000221!6.05e-10!44;CL:0000133!6.05e-10!44;CL:0002319!2.37e-09!43;CL:0000117!2.41e-08!23;CL:0000337!2.41e-08!23;CL:0000540!4.51e-07!33;CL:0000047!4.51e-07!33;CL:0000031!4.51e-07!33;CL:0000404!4.51e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-10,23;CL:0000337,1.51e-10,23;CL:0000221,2.62e-10,44;CL:0000133,2.62e-10,44;CL:0002319,1.52e-09,43;CL:0000540,3.48e-07,33;CL:0000047,3.48e-07,33;CL:0000031,3.48e-07,33;CL:0000404,3.48e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.48e-28!102;UBERON:0000924!2.48e-28!102;UBERON:0006601!2.48e-28!102;UBERON:0000033!1.30e-23!63;UBERON:0000073!1.18e-22!75;UBERON:0001016!1.18e-22!75;UBERON:0001017!3.49e-21!73;UBERON:0005743!3.49e-21!73;UBERON:0002346!1.20e-20!71;UBERON:0003075!1.20e-20!71;UBERON:0007284!1.20e-20!71;UBERON:0001049!5.44e-18!52;UBERON:0005068!5.44e-18!52;UBERON:0006241!5.44e-18!52;UBERON:0007135!5.44e-18!52;UBERON:0003056!1.21e-17!49;UBERON:0000955!6.96e-17!50;UBERON:0006238!6.96e-17!50;UBERON:0002616!2.44e-16!49;UBERON:0000153!2.37e-14!94;UBERON:0007811!1.81e-13!86;UBERON:0003080!1.30e-12!40;UBERON:0002020!3.77e-12!34;UBERON:0002780!5.37e-12!39;UBERON:0001890!5.37e-12!39;UBERON:0006240!5.37e-12!39;UBERON:0002791!1.50e-09!29;UBERON:0003528!1.50e-09!29;UBERON:0001893!1.50e-09!29;UBERON:0000020!1.76e-07!12;UBERON:0001032!1.76e-07!12;UBERON:0004456!1.76e-07!12;UBERON:0005085!7.48e-07!13;UBERON:0000956!9.64e-07!21;UBERON:0001869!9.64e-07!21;UBERON:0000203!9.64e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.62e-36,95;UBERON:0000924,3.62e-36,95;UBERON:0006601,3.62e-36,95;UBERON:0010371,1.14e-34,73;UBERON:0002346,1.47e-28,64;UBERON:0003075,1.47e-28,64;UBERON:0007284,1.47e-28,64;UBERON:0001016,4.70e-25,75;UBERON:0000073,8.82e-24,54;UBERON:0001017,4.21e-23,73;UBERON:0001049,4.13e-22,52;UBERON:0005068,4.13e-22,52;UBERON:0006241,4.13e-22,52;UBERON:0007135,4.13e-22,52;UBERON:0003056,4.81e-21,49;UBERON:0000955,5.26e-18,47;UBERON:0006238,5.26e-18,47;UBERON:0002616,2.88e-17,46;UBERON:0010314,3.40e-17,92;UBERON:0002020,4.48e-16,34;UBERON:0003080,4.28e-14,40;UBERON:0002780,2.92e-13,39;UBERON:0001890,2.92e-13,39;UBERON:0006240,2.92e-13,39;UBERON:0003528,2.48e-12,29;UBERON:0002791,2.48e-12,29;UBERON:0001893,2.48e-12,29;UBERON:0005085,6.22e-10,13;UBERON:0000020,2.46e-09,12;UBERON:0001032,2.46e-09,12;UBERON:0004456,2.46e-09,12;UBERON:0003076,3.76e-09,12;UBERON:0003057,3.76e-09,12;UBERON:0000970,1.53e-08,9;UBERON:0000019,1.53e-08,9;UBERON:0000047,1.53e-08,9;UBERON:0010312,1.53e-08,9;UBERON:0004088,1.53e-08,9;UBERON:0002104,1.53e-08,9;UBERON:0001456,1.53e-08,9;UBERON:0003072,1.53e-08,9;UBERON:0004128,1.53e-08,9;UBERON:0003071,1.53e-08,9;UBERON:0000033,2.55e-08,13;UBERON:0000956,2.73e-08,21;UBERON:0001869,2.73e-08,21;UBERON:0000203,2.73e-08,21;UBERON:0002619,1.10e-07,17;UBERON:0002021,3.32e-07,10;UBERON:0000411,3.32e-07,10;UBERON:0001950,3.32e-07,10|phase1_expression=9.44878197918284,0,0,0,0,0.503637815735669,0.700837921786577,1.03298658753261,0,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,1.53077922271926,0,0,1.11994695955385,1.37645568640302,0,0.86152399231815,0.430942465371778,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.31811709640683,3.30530828426282,0.699932108126813,2.87505128729943,0,0,0,0.257259436035947,0.573066879877513,0,1.61853168687678,2.11596391708813,1.90149421051854,0,0,0,0,0,0.898800331555214,1.92109152660777,1.55534418462716,0.810035629990144,1.47227472945967,3.14216082844184,6.62605622854841,0.61245399607477,1.15014565221884,0,6.60695285996332,5.2351808614927,7.68032666281217,1.18697658957174,1.18933936683133,2.08365348222704,6.14202597803038,4.50210088025344,6.26472815884921,10.0173719061047,7.40332740155335,1.86399445825301,29.0031320466095,42.0177874193728,1.73918693221007,0,0,0,0,0,0.561777680527007,0,0,0,51.5486916382651,0,0,0,0.216491041011214,0,0,1.02765491747154,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0.808834249737046,1.10420759230197,0.484875253135222,0,5.85561594023094,5.44561437714983,0.255457055208591,0,0,0,8.38827580667007,3.20250421973039,1.00523481690292,3.12883776346098,3.06858548796397,6.2336413367868,5.84068547043927,0.611036183101898,0.746441823660558,1.51633655060205,10.9429765060966,2.99277018814219,3.44853156650209,2.16074555766419,3.46621081022145,6.12328492361951,7.55870949680614,6.37171727006156,11.9003550539947,0.215567992932842,1.70195472151037,1.05570674498369,0.657587197282725,0.556094498451196,1.74126083261083,2.05782136407943,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.23674473558521,0.590292695242212,0.154267112887378,0.465067889500816,0.536546802799238,0.233530684734339,0.329119699826961,1.47750717671186,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,6.09840850835969,1.3377599609307,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0,0,0,0.456994050438915,0,0.610953983535943,0.193952487167626,1.33258057791605,2.08680572510049,7.38050739898011,6.27994911365499,4.81248939295022,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,0.238043640886014,0,0.157635144106191,0.8858587585951,0.637819074629948,0,0,0.289298117163023,0,0,0,3.03530420935206,14.7706542788769,12.7760738385501,0.163934945376675,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0.445597348164788,0.283076530788832,0.809621403349789,0,0.395287777946524,4.4984984299053,0.283880170416537,0.712262414669021,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,1.70219802876894,3.06103859853227,0.646793418913773,2.14337035031592,0.532020700926821,0.713475270408282,1.81003922662333,0.913394847343798,0,0.63549621259146,0.220528398054962,6.10079135883476,2.09903754704677,3.37752379597673,3.10368094408155,4.59594519286172,0,17.9862542950194,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0,0.621339313086926,0,1.19613236835183,0.992750942742586,0.583353565032143,1.29159823477731,1.520605129417,1.17357238645754,1.5624526181274,1.36317147753424,0,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.100966449948148,0.0762068066549998,0.201652370273681,0.877120926657772,0.673482891482306,0.233753804363138,0.680191150845634,0,0,0,0.386379188064381,0.93841237725591,0.73260649706906,0.428736758158132,0,3.95326289831947,1.84130094602871,3.43737308063638,1.71853182343688,4.11049511862385,2.2661816921691,2.02506750069542,3.60256962579376,2.71885445390523,2.5888015587591,4.04770655578289,2.39414924040619,1.53660245178721,0.486213434136588,0.419226325255965,0.183843508450014,1.11123363900808,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,0.943131706930381,0.842773567228942,1.47257850531199,0.689225627467359,0.476293691283074,1.27472758539341,0.192909220463705,0.824171801606613,1.61918812147837,0.342869252385415,0.354951612318675,0.953744759789284,0.872078499793971,0.752875043322645,1.35383372626682,0.73171189149109,1.31534855718921,1.7654534799962,1.68342681497322,0.474540072496697,0.591026894253381,2.45538625901814,0.619747364743864,0.192906610981141,1.74867404556562,0.701794825336225,1.93383948643468,0.765153328275374,4.41182838239031,6.02856372613096|short_description=p2@Itgb8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320910 | |||
|HGNC= | |||
|MCL_coexpression_id=931 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q0VBD0 | |||
|association_with_transcript=274bp_to_NM_177290,uc007pik.1,uc007pil.1,uc007pim.1,uc011yvv.1_5end | |||
|cluster_id=chr12:120476420..120476474,- | |||
|description=CAGE_peak_2_at_Itgb8_5end | |||
|id=chr12:120476420..120476474,- | |||
|ontology_enrichment_celltype=CL:0000221!6.05e-10!44;CL:0000133!6.05e-10!44;CL:0002319!2.37e-09!43;CL:0000117!2.41e-08!23;CL:0000337!2.41e-08!23;CL:0000540!4.51e-07!33;CL:0000047!4.51e-07!33;CL:0000031!4.51e-07!33;CL:0000404!4.51e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-10,23;CL:0000337,1.51e-10,23;CL:0000221,2.62e-10,44;CL:0000133,2.62e-10,44;CL:0002319,1.52e-09,43;CL:0000540,3.48e-07,33;CL:0000047,3.48e-07,33;CL:0000031,3.48e-07,33;CL:0000404,3.48e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.48e-28!102;UBERON:0000924!2.48e-28!102;UBERON:0006601!2.48e-28!102;UBERON:0000033!1.30e-23!63;UBERON:0000073!1.18e-22!75;UBERON:0001016!1.18e-22!75;UBERON:0001017!3.49e-21!73;UBERON:0005743!3.49e-21!73;UBERON:0002346!1.20e-20!71;UBERON:0003075!1.20e-20!71;UBERON:0007284!1.20e-20!71;UBERON:0001049!5.44e-18!52;UBERON:0005068!5.44e-18!52;UBERON:0006241!5.44e-18!52;UBERON:0007135!5.44e-18!52;UBERON:0003056!1.21e-17!49;UBERON:0000955!6.96e-17!50;UBERON:0006238!6.96e-17!50;UBERON:0002616!2.44e-16!49;UBERON:0000153!2.37e-14!94;UBERON:0007811!1.81e-13!86;UBERON:0003080!1.30e-12!40;UBERON:0002020!3.77e-12!34;UBERON:0002780!5.37e-12!39;UBERON:0001890!5.37e-12!39;UBERON:0006240!5.37e-12!39;UBERON:0002791!1.50e-09!29;UBERON:0003528!1.50e-09!29;UBERON:0001893!1.50e-09!29;UBERON:0000020!1.76e-07!12;UBERON:0001032!1.76e-07!12;UBERON:0004456!1.76e-07!12;UBERON:0005085!7.48e-07!13;UBERON:0000956!9.64e-07!21;UBERON:0001869!9.64e-07!21;UBERON:0000203!9.64e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.62e-36,95;UBERON:0000924,3.62e-36,95;UBERON:0006601,3.62e-36,95;UBERON:0010371,1.14e-34,73;UBERON:0002346,1.47e-28,64;UBERON:0003075,1.47e-28,64;UBERON:0007284,1.47e-28,64;UBERON:0001016,4.70e-25,75;UBERON:0000073,8.82e-24,54;UBERON:0001017,4.21e-23,73;UBERON:0001049,4.13e-22,52;UBERON:0005068,4.13e-22,52;UBERON:0006241,4.13e-22,52;UBERON:0007135,4.13e-22,52;UBERON:0003056,4.81e-21,49;UBERON:0000955,5.26e-18,47;UBERON:0006238,5.26e-18,47;UBERON:0002616,2.88e-17,46;UBERON:0010314,3.40e-17,92;UBERON:0002020,4.48e-16,34;UBERON:0003080,4.28e-14,40;UBERON:0002780,2.92e-13,39;UBERON:0001890,2.92e-13,39;UBERON:0006240,2.92e-13,39;UBERON:0003528,2.48e-12,29;UBERON:0002791,2.48e-12,29;UBERON:0001893,2.48e-12,29;UBERON:0005085,6.22e-10,13;UBERON:0000020,2.46e-09,12;UBERON:0001032,2.46e-09,12;UBERON:0004456,2.46e-09,12;UBERON:0003076,3.76e-09,12;UBERON:0003057,3.76e-09,12;UBERON:0000970,1.53e-08,9;UBERON:0000019,1.53e-08,9;UBERON:0000047,1.53e-08,9;UBERON:0010312,1.53e-08,9;UBERON:0004088,1.53e-08,9;UBERON:0002104,1.53e-08,9;UBERON:0001456,1.53e-08,9;UBERON:0003072,1.53e-08,9;UBERON:0004128,1.53e-08,9;UBERON:0003071,1.53e-08,9;UBERON:0000033,2.55e-08,13;UBERON:0000956,2.73e-08,21;UBERON:0001869,2.73e-08,21;UBERON:0000203,2.73e-08,21;UBERON:0002619,1.10e-07,17;UBERON:0002021,3.32e-07,10;UBERON:0000411,3.32e-07,10;UBERON:0001950,3.32e-07,10 | |||
|phase1_expression=9.44878197918284,0,0,0,0,0.503637815735669,0.700837921786577,1.03298658753261,0,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,1.53077922271926,0,0,1.11994695955385,1.37645568640302,0,0.86152399231815,0.430942465371778,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.31811709640683,3.30530828426282,0.699932108126813,2.87505128729943,0,0,0,0.257259436035947,0.573066879877513,0,1.61853168687678,2.11596391708813,1.90149421051854,0,0,0,0,0,0.898800331555214,1.92109152660777,1.55534418462716,0.810035629990144,1.47227472945967,3.14216082844184,6.62605622854841,0.61245399607477,1.15014565221884,0,6.60695285996332,5.2351808614927,7.68032666281217,1.18697658957174,1.18933936683133,2.08365348222704,6.14202597803038,4.50210088025344,6.26472815884921,10.0173719061047,7.40332740155335,1.86399445825301,29.0031320466095,42.0177874193728,1.73918693221007,0,0,0,0,0,0.561777680527007,0,0,0,51.5486916382651,0,0,0,0.216491041011214,0,0,1.02765491747154,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0.808834249737046,1.10420759230197,0.484875253135222,0,5.85561594023094,5.44561437714983,0.255457055208591,0,0,0,8.38827580667007,3.20250421973039,1.00523481690292,3.12883776346098,3.06858548796397,6.2336413367868,5.84068547043927,0.611036183101898,0.746441823660558,1.51633655060205,10.9429765060966,2.99277018814219,3.44853156650209,2.16074555766419,3.46621081022145,6.12328492361951,7.55870949680614,6.37171727006156,11.9003550539947,0.215567992932842,1.70195472151037,1.05570674498369,0.657587197282725,0.556094498451196,1.74126083261083,2.05782136407943,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.23674473558521,0.590292695242212,0.154267112887378,0.465067889500816,0.536546802799238,0.233530684734339,0.329119699826961,1.47750717671186,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,6.09840850835969,1.3377599609307,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0,0,0,0.456994050438915,0,0.610953983535943,0.193952487167626,1.33258057791605,2.08680572510049,7.38050739898011,6.27994911365499,4.81248939295022,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,0.238043640886014,0,0.157635144106191,0.8858587585951,0.637819074629948,0,0,0.289298117163023,0,0,0,3.03530420935206,14.7706542788769,12.7760738385501,0.163934945376675,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0.445597348164788,0.283076530788832,0.809621403349789,0,0.395287777946524,4.4984984299053,0.283880170416537,0.712262414669021,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,1.70219802876894,3.06103859853227,0.646793418913773,2.14337035031592,0.532020700926821,0.713475270408282,1.81003922662333,0.913394847343798,0,0.63549621259146,0.220528398054962,6.10079135883476,2.09903754704677,3.37752379597673,3.10368094408155,4.59594519286172,0,17.9862542950194,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0,0.621339313086926,0,1.19613236835183,0.992750942742586,0.583353565032143,1.29159823477731,1.520605129417,1.17357238645754,1.5624526181274,1.36317147753424,0,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.100966449948148,0.0762068066549998,0.201652370273681,0.877120926657772,0.673482891482306,0.233753804363138,0.680191150845634,0,0,0,0.386379188064381,0.93841237725591,0.73260649706906,0.428736758158132,0,3.95326289831947,1.84130094602871,3.43737308063638,1.71853182343688,4.11049511862385,2.2661816921691,2.02506750069542,3.60256962579376,2.71885445390523,2.5888015587591,4.04770655578289,2.39414924040619,1.53660245178721,0.486213434136588,0.419226325255965,0.183843508450014,1.11123363900808,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,0.943131706930381,0.842773567228942,1.47257850531199,0.689225627467359,0.476293691283074,1.27472758539341,0.192909220463705,0.824171801606613,1.61918812147837,0.342869252385415,0.354951612318675,0.953744759789284,0.872078499793971,0.752875043322645,1.35383372626682,0.73171189149109,1.31534855718921,1.7654534799962,1.68342681497322,0.474540072496697,0.591026894253381,2.45538625901814,0.619747364743864,0.192906610981141,1.74867404556562,0.701794825336225,1.93383948643468,0.765153328275374,4.41182838239031,6.02856372613096 | |||
|short_description=p2@Itgb8 | |||
}} |
Revision as of 20:51, 4 August 2015
Short description: | p2@Itgb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Itgb8_5end |
Coexpression cluster: | MCL_coexpression_mm9:931 |
Association with transcript: | 274bp_to_NM_177290, uc007pik.1, uc007pil.1, uc007pim.1, uc011yvv.1_5end |
EntrezGene: | 320910 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.51e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.51e-10 | 23 |
ectodermal cell | 2.62e-10 | 44 |
neurectodermal cell | 2.62e-10 | 44 |
neural cell | 1.52e-09 | 43 |
neuron | 3.48e-07 | 33 |
neuronal stem cell | 3.48e-07 | 33 |
neuroblast | 3.48e-07 | 33 |
electrically signaling cell | 3.48e-07 | 33 |