FFCP PHASE1:Mm9::chr12:114503281..114503293,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=180|UniProt=|association_with_transcript=34bp_to_uc007pgh.1_5end|description=CAGE_peak_1_at_uc007pgh.1_5end|id=chr12:114503281..114503293,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!1.03e-09!24;UBERON:0001557!1.03e-09!24;UBERON:0001042!1.03e-09!24;UBERON:0008814!1.03e-09!24;UBERON:0009145!1.03e-09!24;UBERON:0004177!4.12e-09!29;UBERON:0002193!1.21e-08!48;UBERON:0002370!1.54e-08!23;UBERON:0000974!1.54e-08!23;UBERON:0004807!1.54e-08!23;UBERON:0005058!1.54e-08!23;UBERON:0003351!1.54e-08!23;UBERON:0009113!1.54e-08!23;UBERON:0003295!1.54e-08!23;UBERON:0009722!1.54e-08!23;UBERON:0005562!1.54e-08!23;UBERON:0007690!1.54e-08!23;UBERON:0000072!2.34e-08!27;UBERON:0003408!4.31e-08!24;UBERON:0000331!1.39e-07!3;UBERON:0002116!1.39e-07!3;UBERON:0001204!1.39e-07!3;UBERON:0001168!1.39e-07!3;UBERON:0000014!4.84e-07!5;UBERON:0001003!4.84e-07!5;UBERON:0002097!4.84e-07!5;UBERON:0002199!4.84e-07!5;UBERON:0007029!4.84e-07!5;UBERON:0007376!4.84e-07!5;UBERON:0002416!4.84e-07!5;UBERON:0007383!4.84e-07!5;UBERON:0000064!7.63e-07!99;UBERON:0002390!8.33e-07!45;UBERON:0003061!8.33e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.05e-16,2;UBERON:0001961,2.05e-16,2;UBERON:0001744,2.05e-16,2;UBERON:0000344,2.33e-12,15;UBERON:0002465,2.91e-11,3;UBERON:0000331,1.77e-10,3;UBERON:0002116,1.77e-10,3;UBERON:0001204,1.77e-10,3;UBERON:0001168,1.77e-10,3;UBERON:0003199,4.39e-09,1;UBERON:0002108,4.40e-08,4;UBERON:0004923,1.02e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.17008658030214,6.65249373045932,1.30599894569468,72.1565826798264,76.1638813143004,0,0,0,0.380046838912748,1.00812051903972,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,1.31796636956512,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.32225283331772,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.241251699712623,0.477489376012546,0.492422699235184,0,0,0.854354403989263,0,0,0,0.136694227721025,0,4.58941760983409,4.19854356970974,4.69879910935041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0.381034033274999,0.302478555410522,0.487289403698762,0.577271049841977,0.467507608726276,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p1@uc007pgh.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=180 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=34bp_to_uc007pgh.1_5end | |||
|cluster_id=chr12:114503281..114503293,- | |||
|description=CAGE_peak_1_at_uc007pgh.1_5end | |||
|id=chr12:114503281..114503293,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!1.03e-09!24;UBERON:0001557!1.03e-09!24;UBERON:0001042!1.03e-09!24;UBERON:0008814!1.03e-09!24;UBERON:0009145!1.03e-09!24;UBERON:0004177!4.12e-09!29;UBERON:0002193!1.21e-08!48;UBERON:0002370!1.54e-08!23;UBERON:0000974!1.54e-08!23;UBERON:0004807!1.54e-08!23;UBERON:0005058!1.54e-08!23;UBERON:0003351!1.54e-08!23;UBERON:0009113!1.54e-08!23;UBERON:0003295!1.54e-08!23;UBERON:0009722!1.54e-08!23;UBERON:0005562!1.54e-08!23;UBERON:0007690!1.54e-08!23;UBERON:0000072!2.34e-08!27;UBERON:0003408!4.31e-08!24;UBERON:0000331!1.39e-07!3;UBERON:0002116!1.39e-07!3;UBERON:0001204!1.39e-07!3;UBERON:0001168!1.39e-07!3;UBERON:0000014!4.84e-07!5;UBERON:0001003!4.84e-07!5;UBERON:0002097!4.84e-07!5;UBERON:0002199!4.84e-07!5;UBERON:0007029!4.84e-07!5;UBERON:0007376!4.84e-07!5;UBERON:0002416!4.84e-07!5;UBERON:0007383!4.84e-07!5;UBERON:0000064!7.63e-07!99;UBERON:0002390!8.33e-07!45;UBERON:0003061!8.33e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.05e-16,2;UBERON:0001961,2.05e-16,2;UBERON:0001744,2.05e-16,2;UBERON:0000344,2.33e-12,15;UBERON:0002465,2.91e-11,3;UBERON:0000331,1.77e-10,3;UBERON:0002116,1.77e-10,3;UBERON:0001204,1.77e-10,3;UBERON:0001168,1.77e-10,3;UBERON:0003199,4.39e-09,1;UBERON:0002108,4.40e-08,4;UBERON:0004923,1.02e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.17008658030214,6.65249373045932,1.30599894569468,72.1565826798264,76.1638813143004,0,0,0,0.380046838912748,1.00812051903972,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,1.31796636956512,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.32225283331772,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.241251699712623,0.477489376012546,0.492422699235184,0,0,0.854354403989263,0,0,0,0.136694227721025,0,4.58941760983409,4.19854356970974,4.69879910935041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0.381034033274999,0.302478555410522,0.487289403698762,0.577271049841977,0.467507608726276,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p1@uc007pgh.1 | |||
}} |
Latest revision as of 19:40, 4 August 2015
Short description: | p1@uc007pgh.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007pgh.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:180 |
Association with transcript: | 34bp_to_uc007pgh.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 2.05e-16 | 2 |
mucosa-associated lymphoid tissue | 2.05e-16 | 2 |
lymphoid tissue | 2.05e-16 | 2 |
mucosa | 2.33e-12 | 15 |
lymphoid system | 2.91e-11 | 3 |
ileal mucosa | 1.77e-10 | 3 |
ileum | 1.77e-10 | 3 |
mucosa of small intestine | 1.77e-10 | 3 |
wall of small intestine | 1.77e-10 | 3 |
egg chamber | 4.39e-09 | 1 |
small intestine | 4.40e-08 | 4 |
organ component layer | 1.02e-07 | 24 |