FFCP PHASE1:Hg19::chr3:15374764..15374776,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9467 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10827 | |||
|TSSclassifier=strong | |||
|UniProt=B3KQW6 | |||
|association_with_transcript=-68bp_to_ENST00000426925,uc003bzq.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_SH3BP5_5end | |||
|id=chr3:15374764..15374776,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.68e-30;10!UBERON:0005564;1.68e-30;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.11e-23!115;UBERON:0000007!5.76e-17!2;UBERON:0001049!4.73e-14!57;UBERON:0005068!4.73e-14!57;UBERON:0006241!4.73e-14!57;UBERON:0007135!4.73e-14!57;UBERON:0002616!1.60e-13!59;UBERON:0000955!2.40e-13!69;UBERON:0006238!2.40e-13!69;UBERON:0000988!4.90e-11!3;UBERON:0001017!5.86e-11!82;UBERON:0002780!1.12e-10!41;UBERON:0001890!1.12e-10!41;UBERON:0006240!1.12e-10!41;UBERON:0003080!2.11e-10!42;UBERON:0005743!2.29e-10!86;UBERON:0002336!2.40e-09!1;UBERON:0001018!2.40e-09!1;UBERON:0002473!2.40e-09!1;UBERON:0005340!2.40e-09!1;UBERON:0002316!2.40e-09!1;UBERON:0003544!2.40e-09!1;UBERON:0001020!2.40e-09!1;UBERON:0005970!2.40e-09!1;UBERON:0002437!2.40e-09!1;UBERON:0005418!2.82e-09!1;UBERON:0001389!2.82e-09!1;UBERON:0000026!2.82e-09!1;UBERON:0008784!2.82e-09!1;UBERON:0006058!2.82e-09!1;UBERON:0003663!2.82e-09!1;UBERON:0001383!2.82e-09!1;UBERON:0004256!2.82e-09!1;UBERON:0002529!2.82e-09!1;UBERON:0004708!2.82e-09!1;UBERON:0002101!2.82e-09!1;UBERON:0004709!2.82e-09!1;UBERON:0003661!2.82e-09!1;UBERON:0002471!2.82e-09!1;UBERON:0004357!2.82e-09!1;UBERON:0009872!2.82e-09!1;UBERON:0004347!2.82e-09!1;UBERON:0005420!2.82e-09!1;UBERON:0005732!2.82e-09!1;UBERON:0006057!2.82e-09!1;UBERON:0000978!2.82e-09!1;UBERON:0002103!2.82e-09!1;UBERON:0001665!2.82e-09!1;UBERON:0003823!2.82e-09!1;UBERON:0000154!2.82e-09!1;UBERON:0005733!2.82e-09!1;UBERON:0005730!2.82e-09!1;UBERON:0003112!3.05e-09!1;UBERON:0000032!3.05e-09!1;UBERON:0005253!3.05e-09!1;UBERON:0003128!3.05e-09!1;UBERON:0002241!3.05e-09!1;UBERON:0001703!3.05e-09!1;UBERON:0004761!3.05e-09!1;UBERON:0009617!3.05e-09!1;UBERON:0000073!3.28e-09!94;UBERON:0001016!3.28e-09!94;UBERON:0001882!4.19e-09!1;UBERON:0005403!4.19e-09!1;UBERON:0001301!4.54e-09!1;UBERON:0001874!4.91e-09!1;UBERON:0002298!5.42e-09!8;UBERON:0002581!5.75e-09!1;UBERON:0003296!6.23e-09!4;UBERON:0010133!6.23e-09!4;UBERON:0000153!7.67e-09!129;UBERON:0007811!7.67e-09!129;UBERON:0003075!9.40e-09!86;UBERON:0007284!9.40e-09!86;UBERON:0000369!1.16e-08!4;UBERON:0002435!1.16e-08!4;UBERON:0000204!1.16e-08!4;UBERON:0010082!1.16e-08!4;UBERON:0002346!2.74e-08!90;UBERON:0002308!2.98e-08!9;UBERON:0000125!2.98e-08!9;UBERON:0000033!5.38e-08!123;UBERON:0002791!1.30e-07!33;UBERON:0001893!2.21e-07!34;UBERON:0002020!2.50e-07!34;UBERON:0003528!2.50e-07!34;UBERON:0003135!4.60e-07!11;UBERON:0001872!6.18e-07!5;UBERON:0003056!6.93e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;8.34e-34;1!UBERON:0011215;8.34e-34;1!UBERON:0001018;8.34e-34;1!UBERON:0002473;8.34e-34;1!UBERON:0005340;8.34e-34;1!UBERON:0003544;8.34e-34;1!UBERON:0005970;8.34e-34;1!UBERON:0002316;8.34e-34;1!UBERON:0001020;8.34e-34;1!UBERON:0002437;8.34e-34;1!UBERON:0000007;1.17e-17;2!UBERON:0005162;1.17e-17;2!UBERON:0000122;1.17e-17;2!UBERON:0000473;1.27e-17;8!UBERON:0000991;5.40e-15;21!UBERON:0003135;4.13e-13;11!UBERON:0003296;1.63e-09;4!UBERON:0010133;1.63e-09;4!UBERON:0003101;4.86e-07;22!UBERON:0000079;4.86e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,9.85e-34,1;UBERON:0011215,9.85e-34,1;UBERON:0001018,9.85e-34,1;UBERON:0002473,9.85e-34,1;UBERON:0005340,9.85e-34,1;UBERON:0003544,9.85e-34,1;UBERON:0005970,9.85e-34,1;UBERON:0002316,9.85e-34,1;UBERON:0001020,9.85e-34,1;UBERON:0002437,9.85e-34,1;UBERON:0000007,1.07e-17,2;UBERON:0005162,1.27e-17,2;UBERON:0000122,1.27e-17,2;UBERON:0000473,1.33e-17,8;UBERON:0000991,5.40e-15,21;UBERON:0009196,5.40e-15,21;UBERON:0009117,5.40e-15,21;UBERON:0005564,5.40e-15,21;UBERON:0004176,2.38e-14,22;UBERON:0003135,4.25e-13,11;UBERON:0003296,1.57e-09,4;UBERON:0010133,1.57e-09,4;UBERON:0007023,1.11e-07,114;UBERON:0002323,3.06e-07,46;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22;UBERON:0003133,5.76e-07,48;UBERON:0004458,7.75e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,4.88867134270172,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,1.21393120847326,0.682986574053893,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16782840200317,11.7904217268719,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SH3BP5 | |||
}} |
Revision as of 17:37, 21 January 2014
Short description: | p5@SH3BP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SH3BP5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -68bp_to_ENST00000426925, uc003bzq.1_5end |
EntrezGene: | SH3BP5 |
HGNC: | 10827 |
UniProt: | B3KQW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 9.85e-34 | 1 |
central nervous system cell part cluster | 9.85e-34 | 1 |
axon tract | 9.85e-34 | 1 |
intercerebral commissure | 9.85e-34 | 1 |
dorsal telencephalic commissure | 9.85e-34 | 1 |
brain white matter | 9.85e-34 | 1 |
brain commissure | 9.85e-34 | 1 |
white matter | 9.85e-34 | 1 |
nervous system commissure | 9.85e-34 | 1 |
cerebral hemisphere white matter | 9.85e-34 | 1 |
pituitary gland | 1.07e-17 | 2 |
multi cell component structure | 1.27e-17 | 2 |
neuron projection bundle | 1.27e-17 | 2 |
testis | 1.33e-17 | 8 |
gonad | 5.40e-15 | 21 |
indifferent external genitalia | 5.40e-15 | 21 |
indifferent gonad | 5.40e-15 | 21 |
gonad primordium | 5.40e-15 | 21 |
external genitalia | 2.38e-14 | 22 |
male reproductive organ | 4.25e-13 | 11 |
gland of diencephalon | 1.57e-09 | 4 |
neuroendocrine gland | 1.57e-09 | 4 |
adult organism | 1.11e-07 | 114 |
body cavity | 3.06e-07 | 46 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |
reproductive organ | 5.76e-07 | 48 |
body cavity or lining | 7.75e-07 | 49 |