FFCP PHASE1:Hg19::chr3:129693523..129693541,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12298 | |||
|TSSclassifier=strong | |||
|UniProt=D6RFM1 | |||
|association_with_transcript=0bp_to_ENST00000507066_5end | |||
|coexpression_cluster_id=C430 | |||
|description=CAGE_peak_2_at_TRH_5end | |||
|id=chr3:129693523..129693541,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.83e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.19e-10;7!CL:0000586;1.19e-10;7!CL:0002032;1.32e-09;1!CL:0000557;1.32e-09;1!CL:0000037;1.76e-09;1!CL:0001024;1.76e-09;1!CL:0000228;3.53e-09;1!CL:0002372;3.53e-09;1!CL:0002591;3.53e-09;1!CL:0002322;2.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-10,7;CL:0000586,1.28e-10,7;CL:0001024,1.56e-09,1;CL:0000228,2.77e-09,1;CL:0002372,2.77e-09,1;CL:0002591,4.50e-09,1;CL:0002322,2.07e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.33e-07;10!UBERON:0005564;1.33e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.31e-19!57;UBERON:0005068!9.31e-19!57;UBERON:0006241!9.31e-19!57;UBERON:0007135!9.31e-19!57;UBERON:0005743!9.26e-18!86;UBERON:0001017!1.23e-17!82;UBERON:0000073!2.26e-16!94;UBERON:0001016!2.26e-16!94;UBERON:0002616!9.42e-15!59;UBERON:0002346!1.62e-14!90;UBERON:0003075!1.66e-14!86;UBERON:0007284!1.66e-14!86;UBERON:0002020!3.00e-13!34;UBERON:0003528!3.00e-13!34;UBERON:0000955!1.28e-12!69;UBERON:0006238!1.28e-12!69;UBERON:0007023!1.12e-11!115;UBERON:0001893!1.73e-11!34;UBERON:0002780!2.01e-11!41;UBERON:0001890!2.01e-11!41;UBERON:0006240!2.01e-11!41;UBERON:0003080!4.79e-11!42;UBERON:0001869!6.27e-11!32;UBERON:0002791!1.52e-10!33;UBERON:0003076!8.58e-10!15;UBERON:0003057!8.58e-10!15;UBERON:0002308!1.06e-09!9;UBERON:0000125!1.06e-09!9;UBERON:0001950!7.01e-09!20;UBERON:0000924!1.45e-08!173;UBERON:0006601!1.45e-08!173;UBERON:0002298!1.47e-08!8;UBERON:0004121!2.14e-08!169;UBERON:0003056!2.88e-08!61;UBERON:0000153!4.14e-08!129;UBERON:0007811!4.14e-08!129;UBERON:0002619!6.68e-08!22;UBERON:0004733!1.37e-07!12;UBERON:0002028!1.37e-07!12;UBERON:0007277!1.37e-07!12;UBERON:0000033!1.40e-07!123;UBERON:0002420!3.57e-07!9;UBERON:0007245!3.57e-07!9;UBERON:0010009!3.57e-07!9;UBERON:0010011!3.57e-07!9;UBERON:0000454!3.57e-07!9;UBERON:0004732!6.50e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.72e-10;49!UBERON:0000473;2.20e-09;8!UBERON:0003135;5.92e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.34e-09,8;UBERON:0003135,6.18e-07,11 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0.626909442956176,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,2.64240395401362,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0.419317291016752,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,4.47752944117631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,1.51052125730374,3.31715376049185,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55046890945169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,1.32845119707087,0.921845842708516,0,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34053759092657,0,19.8019383567479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,1.69290568708354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06765333404958,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0,3.83239764200917,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.665574309221114,0.558867626472451,0,0,0,0,0,0,0.434763085832475,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,4.17967248506643,0,0,0,0.321146125482298,0,0,0.615349092722265,3.27693205088234,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0.339848664884159,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,2.5359343655004,0.849635573439084,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,1.30905207102113,0,0.371995018166751,0,5.19151874548547,0,0.109265571963696,0,1.52983244612973,1.06886962106224,0,1.25353769646188,0.151557396436479,0,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0.813792356631477,0,0,0 | |||
|short_description=p2@TRH | |||
}} |
Revision as of 21:21, 21 January 2014
Short description: | p2@TRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRH_5end |
Coexpression cluster: | C430_acute_giant_chronic_CD34_CD133_melanoma_skeletal |
Association with transcript: | 0bp_to_ENST00000507066_5end |
EntrezGene: | TRH |
HGNC: | 12298 |
UniProt: | D6RFM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-10 | 7 |
germ cell | 1.28e-10 | 7 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.56e-09 | 1 |
multinucleate cell | 2.77e-09 | 1 |
myotube | 2.77e-09 | 1 |
smooth muscle cell of the pulmonary artery | 4.50e-09 | 1 |
embryonic stem cell | 2.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.34e-09 | 8 |
male reproductive organ | 6.18e-07 | 11 |