FFCP PHASE1:Hg19::chr3:112358263..112358270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30649 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=240bp_to_BC023639,BC042128_5end | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_35_at_CCDC80_5end | |||
|id=chr3:112358263..112358270,- | |||
|ontology_enrichment_celltype=CL:0000055!7.85e-21!180;CL:0000057!1.13e-15!75;CL:0002334!1.57e-12!12;CL:0000680!1.45e-10!57;CL:0000056!1.45e-10!57;CL:0000355!1.45e-10!57;CL:0002620!1.85e-09!23;CL:0000187!5.66e-09!54;CL:0000048!2.41e-08!430;CL:0000723!8.17e-08!436;CL:0000183!1.59e-07!59;CL:0000136!1.77e-07!15;CL:0000393!2.87e-07!60;CL:0000211!2.87e-07!60;CL:0000034!3.83e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:1000306;3.21e-17;4!CL:0002547;3.21e-17;4!CL:0002334;5.19e-12;12!CL:0002620;2.51e-10;23!CL:0000136;7.33e-08;13!CL:0000135;5.40e-07;3!CL:0000388;5.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.60e-19,76;CL:1000306,1.51e-17,4;CL:0002547,1.51e-17,4;CL:0002334,3.91e-12,12;CL:0002620,5.31e-10,23;CL:0000136,1.73e-09,15;CL:0000135,5.44e-07,3;CL:0000388,5.44e-07,3;CL:0002579,6.11e-07,3;CL:0002320,7.73e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.75e-08;5!DOID:450;5.75e-08;5!DOID:66;5.75e-08;5!DOID:423;5.75e-08;5!DOID:0080000;5.75e-08;5!DOID:11722;5.75e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.30e-08,5;DOID:450,7.30e-08,5;DOID:66,7.30e-08,5;DOID:423,7.30e-08,5;DOID:0080000,7.30e-08,5;DOID:11722,7.30e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!5.20e-10!63;UBERON:0001015!5.20e-10!63;UBERON:0000383!5.20e-10!63;UBERON:0001134!2.95e-09!61;UBERON:0002036!2.95e-09!61;UBERON:0003082!2.95e-09!61;UBERON:0001013!2.82e-08!14;UBERON:0004290!3.00e-08!70;UBERON:0000486!5.32e-08!82;UBERON:0002199!1.05e-07!45;UBERON:0002416!1.05e-07!45;UBERON:0000914!3.25e-07!83;UBERON:0002329!3.25e-07!83;UBERON:0003077!3.25e-07!83;UBERON:0003059!3.25e-07!83;UBERON:0007282!3.25e-07!83;UBERON:0009618!3.25e-07!83;UBERON:0007285!3.25e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.21e-17;4!UBERON:0000415;3.21e-17;4!UBERON:0007240;3.21e-17;4!UBERON:0005742;3.21e-17;4!UBERON:0005734;3.21e-17;4!UBERON:0004664;3.21e-17;4!UBERON:0004663;3.21e-17;4!UBERON:0003688;1.80e-11;6!UBERON:0002358;1.80e-11;6!UBERON:0003684;1.80e-11;6!UBERON:0001178;1.80e-11;6!UBERON:0001013;3.33e-10;14!UBERON:0005406;1.17e-09;2!UBERON:0004457;1.16e-07;9!UBERON:0000042;1.16e-07;9!UBERON:0007846;5.40e-07;3!UBERON:0000043;5.40e-07;3!UBERON:0007845;5.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.51e-17,4;UBERON:0007240,1.51e-17,4;UBERON:0005742,1.51e-17,4;UBERON:0005734,1.51e-17,4;UBERON:0004664,1.51e-17,4;UBERON:0004663,1.51e-17,4;UBERON:0004797,4.40e-15,7;UBERON:0003688,9.46e-12,6;UBERON:0002358,9.46e-12,6;UBERON:0003684,9.46e-12,6;UBERON:0001178,9.46e-12,6;UBERON:0001013,3.11e-10,14;UBERON:0005406,1.09e-09,2;UBERON:0002199,1.99e-08,46;UBERON:0002416,1.99e-08,46;UBERON:0002097,5.35e-08,41;UBERON:0002384,4.35e-07,371;UBERON:0007846,5.44e-07,3;UBERON:0000043,5.44e-07,3;UBERON:0007845,5.44e-07,3;UBERON:0000947,9.35e-07,21;UBERON:0010191,9.35e-07,21 | |||
|phase1_expression=0.181678379270557,1.71280419112787,1.69145284915165,0,1.34088328328186,2.61701557230111,0,1.26343974685366,0.522371256399677,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0.869079113764942,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.13967460498122,1.72131935057184,7.45775213946916,1.77334191099179,1.68203280042692,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0.89694817844431,1.49490172172997,1.05965950579781,1.50045548042201,0.824420233907511,0.257640540045629,0.744467425326359,0.506328996723799,1.36411807225678,1.26216887122057,1.10459878370759,0.646584227275248,2.13005755509969,1.30977727695932,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0.823240336780769,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,0,0.868687840005475,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0.623912584592421,1.42743191037729,0.630809660135739,0.937131319941706,0.300946099727719,0,0,1.99267679560631,0,0,0,0,0,0,0,0,0,0.907170879989041,1.73675465473144,0.153461973288062,1.40330047216537,2.94720043288112,0.511707249066704,1.76939313257968,1.48418066444991,0.771048469013278,0.532685175939381,0.246381468041427,1.03850885836724,0.697262270759755,0,0,0,0.459257792658427,0.728364672026868,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.356128142586949,0,0,0,0.10115778085555,1.39453664789186,1.88887408098384,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0,0,0,0.539617372749944,1.09814811894422,0.471249609382746,0.606547444719948,0,0,0,0.487426979262569,0,0.272999822815972,1.41405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.196498082026242,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0,0,1.55519793830904,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.873633341210151,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,1.39641200636127,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,1.72844298240254,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,1.63599316893057,1.66441758450784,0.378806010550178,0.50313580350515,0,0.686520205190771,2.26846385644859,0,0.443565449968902,0,0,0.310525913752519,0.414706207840855,0.53168342911599,1.04349012362347,0.450772826991655,1.52322084867518,0,0.181848659202559,0.214821114084977,0.928067519756987,0.398095888698616,0.800055529326307,1.37358282073117,0.673498977531838,0,0,0,0,0.906823702049089,0.231522474323834,0.244736704506468,0.179088841081487,0.308801447160972,1.53498834705095,0.353378291891762,0.578742114812744,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,1.1441462864015,0,0.198916222116275,0.150420656698515,0.60511520611056,0,0,0.327543835020193,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0.509781344063451,0,0.128915775947154,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,2.60396512716726,2.31087814315709,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0.448527450322454,0,0,0.653150243690884,0,0.0673520530145875,0.0717222053926763,0,0,0.2134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| |||
|short_description=p35@CCDC80 | |||
}} |
Revision as of 20:32, 21 January 2014
Short description: | p35@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 240bp_to_BC023639, BC042128_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.60e-19 | 76 |
fibroblast of tunica adventitia of artery | 1.51e-17 | 4 |
fibroblast of the aortic adventitia | 1.51e-17 | 4 |
preadipocyte | 3.91e-12 | 12 |
skin fibroblast | 5.31e-10 | 23 |
fat cell | 1.73e-09 | 15 |
fibrocyte | 5.44e-07 | 3 |
tendon cell | 5.44e-07 | 3 |
omentum preadipocyte | 6.11e-07 | 3 |
connective tissue cell | 7.73e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.51e-17 | 4 |
tunica adventitia of artery | 1.51e-17 | 4 |
adventitia | 1.51e-17 | 4 |
tunica adventitia of blood vessel | 1.51e-17 | 4 |
aorta tunica adventitia | 1.51e-17 | 4 |
aorta wall | 1.51e-17 | 4 |
blood vessel layer | 4.40e-15 | 7 |
omentum | 9.46e-12 | 6 |
peritoneum | 9.46e-12 | 6 |
abdominal cavity | 9.46e-12 | 6 |
visceral peritoneum | 9.46e-12 | 6 |
adipose tissue | 3.11e-10 | 14 |
perirenal fat | 1.09e-09 | 2 |
integument | 1.99e-08 | 46 |
integumental system | 1.99e-08 | 46 |
skin of body | 5.35e-08 | 41 |
connective tissue | 4.35e-07 | 371 |
dense regular connective tissue | 5.44e-07 | 3 |
tendon | 5.44e-07 | 3 |
regular connective tissue | 5.44e-07 | 3 |
aorta | 9.35e-07 | 21 |
aortic system | 9.35e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.30e-08 | 5 |
myotonic disease | 7.30e-08 | 5 |
muscle tissue disease | 7.30e-08 | 5 |
myopathy | 7.30e-08 | 5 |
muscular disease | 7.30e-08 | 5 |
myotonic dystrophy | 7.30e-08 | 5 |