FFCP PHASE1:Hg19::chr2:48796120..48796136,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30651 | |||
|TSSclassifier=strong | |||
|UniProt=Q53S48,Q3MIM1 | |||
|association_with_transcript=-22bp_to_ENST00000394754,NM_172311,uc002rwp.1_5end | |||
|description=CAGE_peak_1_at_STON1-GTF2A1L_5end | |||
|id=chr2:48796120..48796136,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.87e-20!15;CL:0002615!2.67e-09!3;CL:0000325!8.14e-09!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.47e-33;13!CL:0002615;5.42e-21;3!CL:0000746;5.12e-10;3!CL:0000737;1.01e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.23e-28,15;CL:0002615,6.22e-21,3;CL:0000746,5.49e-10,3;CL:0000513,5.49e-10,3;CL:0000737,1.07e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;5.12e-10;3!UBERON:0003124;4.87e-08;1!UBERON:0010227;4.87e-08;1!UBERON:0010115;4.87e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.17e-24!115;UBERON:0003076!1.20e-09!15;UBERON:0003057!1.20e-09!15;UBERON:0000988!3.63e-08!3;UBERON:0002298!8.05e-08!8;UBERON:0003688!1.80e-07!6;UBERON:0002358!1.80e-07!6;UBERON:0003684!1.80e-07!6;UBERON:0001178!1.80e-07!6;UBERON:0004457!1.82e-07!12;UBERON:0000042!1.82e-07!12;UBERON:0004733!5.23e-07!12;UBERON:0002028!5.23e-07!12;UBERON:0007277!5.23e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;2.20e-14;2!UBERON:0001905;8.40e-14;2!UBERON:0002757;8.40e-14;2!UBERON:0010134;8.40e-14;2!UBERON:0005408;8.40e-14;2!UBERON:0001899;8.40e-14;2!UBERON:0003688;9.02e-11;6!UBERON:0002358;9.02e-11;6!UBERON:0003684;9.02e-11;6!UBERON:0001178;9.02e-11;6!UBERON:0004151;6.86e-10;3!UBERON:0001282;1.65e-08;1!UBERON:0009842;1.65e-08;1!UBERON:0003704;1.65e-08;1!UBERON:0001171;1.65e-08;1!UBERON:0001172;1.65e-08;1!UBERON:0002363;4.87e-08;1!UBERON:0007029;4.87e-08;1!UBERON:0002079;4.87e-08;1!UBERON:0002134;4.87e-08;1!UBERON:0005208;4.87e-08;1!UBERON:0004145;4.87e-08;1!UBERON:0005946;4.87e-08;1!UBERON:0005965;4.87e-08;1!UBERON:0002078;4.87e-08;1!UBERON:0003296;2.43e-07;4!UBERON:0010133;2.43e-07;4!UBERON:0002784;2.43e-07;4!UBERON:0004457;2.48e-07;9!UBERON:0000042;2.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,2.21e-14,2;UBERON:0010227,2.21e-14,2;UBERON:0001905,1.09e-13,2;UBERON:0002757,1.09e-13,2;UBERON:0010134,1.09e-13,2;UBERON:0005408,1.09e-13,2;UBERON:0001899,1.09e-13,2;UBERON:0003688,9.65e-11,6;UBERON:0002358,9.65e-11,6;UBERON:0003684,9.65e-11,6;UBERON:0001178,9.65e-11,6;UBERON:0004151,6.87e-10,3;UBERON:0004457,3.57e-09,12;UBERON:0000042,3.57e-09,12;UBERON:0001282,1.65e-08,1;UBERON:0009842,1.65e-08,1;UBERON:0003704,1.65e-08,1;UBERON:0001171,1.65e-08,1;UBERON:0001172,1.65e-08,1;UBERON:0007029,3.34e-08,1;UBERON:0002079,3.58e-08,1;UBERON:0002363,3.83e-08,1;UBERON:0007645,3.83e-08,1;UBERON:0007647,3.83e-08,1;UBERON:0010115,3.83e-08,1;UBERON:0002134,6.63e-08,1;UBERON:0005208,6.63e-08,1;UBERON:0005946,6.63e-08,1;UBERON:0005965,6.63e-08,1;UBERON:0002078,6.63e-08,1;UBERON:0003296,2.77e-07,4;UBERON:0010133,2.77e-07,4;UBERON:0002784,2.77e-07,4 | |||
|phase1_expression=0.54503513781167,30.8304754403016,6.20199378022273,1.0007329835313,5.81049422755474,0,5.06599756336621,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780356085359269,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.69490601792545,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,2.01799707191048,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0.111443384277478,0,0,0,0,0,0,0,5.43852784948307,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,32.8153120839363,0,0,0,0.957003479195758,0,0,0,5.65128923022089,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84339608328196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,2.15361907373044,0,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.79339561045614,0,0,0.427149650270779,0,0.828478110694391,0.992332043623902,0,0,0,0.544017803369474,2.506898940227,12.2538230705385,11.803414705553,0,0,0,0,2.29363678276028,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,1.07140367175657,1.00885116665647,0,0.455324382702595,2.57236873471653,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,1.78227840196252,0,0,2.34959794949634,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,2.51027718874367,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@STON1-GTF2A1L | |||
}} |
Revision as of 03:03, 21 January 2014
Short description: | p1@STON1-GTF2A1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STON1-GTF2A1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000394754, NM_172311, uc002rwp.1_5end |
EntrezGene: | STON1-GTF2A1L |
HGNC: | 30651 |
UniProt: | Q53S48Q3MIM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.23e-28 | 15 |
adipocyte of omentum tissue | 6.22e-21 | 3 |
cardiac muscle cell | 5.49e-10 | 3 |
cardiac muscle myoblast | 5.49e-10 | 3 |
striated muscle cell | 1.07e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 2.21e-14 | 2 |
future cardiac atrium | 2.21e-14 | 2 |
pineal body | 1.09e-13 | 2 |
regional part of epithalamus | 1.09e-13 | 2 |
secretory circumventricular organ | 1.09e-13 | 2 |
circumventricular organ | 1.09e-13 | 2 |
epithalamus | 1.09e-13 | 2 |
omentum | 9.65e-11 | 6 |
peritoneum | 9.65e-11 | 6 |
abdominal cavity | 9.65e-11 | 6 |
visceral peritoneum | 9.65e-11 | 6 |
cardiac chamber | 6.87e-10 | 3 |
cavity lining | 3.57e-09 | 12 |
serous membrane | 3.57e-09 | 12 |
intralobular bile duct | 1.65e-08 | 1 |
acinus | 1.65e-08 | 1 |
intrahepatic bile duct | 1.65e-08 | 1 |
portal lobule | 1.65e-08 | 1 |
hepatic acinus | 1.65e-08 | 1 |
surface | 3.34e-08 | 1 |
left cardiac atrium | 3.58e-08 | 1 |
dura mater | 3.83e-08 | 1 |
future meninx | 3.83e-08 | 1 |
ectomeninx | 3.83e-08 | 1 |
future dura mater | 3.83e-08 | 1 |
tricuspid valve | 6.63e-08 | 1 |
right atrium valve | 6.63e-08 | 1 |
outflow tract of atrium | 6.63e-08 | 1 |
outflow part of right atrium | 6.63e-08 | 1 |
right cardiac atrium | 6.63e-08 | 1 |
gland of diencephalon | 2.77e-07 | 4 |
neuroendocrine gland | 2.77e-07 | 4 |
regional part of diencephalon | 2.77e-07 | 4 |