FFCP PHASE1:Mm9::chr10:80477623..80477646,-: Difference between revisions
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{{FFCP|EntrezGene=14708|HGNC=|MCL_coexpression_id=90|UniProt=D3Z483|association_with_transcript=11bp_to_ENSMUST00000126317_5end|description=CAGE_peak_1_at_Gng7_5end|id=chr10:80477623..80477646,-|ontology_enrichment_celltype=CL:0000221!3.50e-16!44;CL:0000133!3.50e-16!44;CL:0002319!9.89e-16!43;CL:0000540!2.69e-15!33;CL:0000047!2.69e-15!33;CL:0000031!2.69e-15!33;CL:0000404!2.69e-15!33;CL:0000393!4.84e-13!39;CL:0000211!4.84e-13!39;CL:0000055!5.23e-13!50;CL:0000117!1.21e-10!23;CL:0000337!1.21e-10!23|ontology_enrichment_celltype_v019_2=CL:0000221,2.68e-17,44;CL:0000133,2.68e-17,44;CL:0002319,8.19e-17,43;CL:0000540,2.41e-16,33;CL:0000047,2.41e-16,33;CL:0000031,2.41e-16,33;CL:0000404,2.41e-16,33;CL:0000393,2.64e-14,39;CL:0000211,2.64e-14,39;CL:0000117,2.46e-11,23;CL:0000337,2.46e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.56e-35!102;UBERON:0000924!4.56e-35!102;UBERON:0006601!4.56e-35!102;UBERON:0000073!6.55e-33!75;UBERON:0001016!6.55e-33!75;UBERON:0001017!7.89e-33!73;UBERON:0005743!7.89e-33!73;UBERON:0002346!1.32e-25!71;UBERON:0003075!1.32e-25!71;UBERON:0007284!1.32e-25!71;UBERON:0000033!6.93e-25!63;UBERON:0001049!4.54e-23!52;UBERON:0005068!4.54e-23!52;UBERON:0006241!4.54e-23!52;UBERON:0007135!4.54e-23!52;UBERON:0000955!3.60e-22!50;UBERON:0006238!3.60e-22!50;UBERON:0002616!1.29e-21!49;UBERON:0003056!1.42e-19!49;UBERON:0003080!1.00e-17!40;UBERON:0002020!1.70e-17!34;UBERON:0002780!3.89e-17!39;UBERON:0001890!3.89e-17!39;UBERON:0006240!3.89e-17!39;UBERON:0002791!4.29e-15!29;UBERON:0003528!4.29e-15!29;UBERON:0001893!4.29e-15!29;UBERON:0000153!1.04e-14!94;UBERON:0007811!5.39e-14!86;UBERON:0000956!5.81e-11!21;UBERON:0001869!5.81e-11!21;UBERON:0000203!5.81e-11!21;UBERON:0002619!5.06e-10!17;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.29e-38,95;UBERON:0000924,3.29e-38,95;UBERON:0006601,3.29e-38,95;UBERON:0001016,2.57e-35,75;UBERON:0001017,3.14e-35,73;UBERON:0010371,2.36e-30,73;UBERON:0002346,1.31e-28,64;UBERON:0003075,1.31e-28,64;UBERON:0007284,1.31e-28,64;UBERON:0000073,5.63e-26,54;UBERON:0001049,1.03e-24,52;UBERON:0005068,1.03e-24,52;UBERON:0006241,1.03e-24,52;UBERON:0007135,1.03e-24,52;UBERON:0000955,7.91e-22,47;UBERON:0006238,7.91e-22,47;UBERON:0002616,3.05e-21,46;UBERON:0003056,5.94e-21,49;UBERON:0003080,5.85e-19,40;UBERON:0002020,1.03e-18,34;UBERON:0002780,2.51e-18,39;UBERON:0001890,2.51e-18,39;UBERON:0006240,2.51e-18,39;UBERON:0003528,3.98e-16,29;UBERON:0002791,3.98e-16,29;UBERON:0001893,3.98e-16,29;UBERON:0010314,7.14e-15,92;UBERON:0000956,1.11e-11,21;UBERON:0001869,1.11e-11,21;UBERON:0000203,1.11e-11,21;UBERON:0002619,1.14e-10,17;UBERON:0002021,3.88e-08,10;UBERON:0000411,3.88e-08,10;UBERON:0001950,3.88e-08,10|phase1_expression=5.2849119544582,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,12.0761472014519,0.397163804803541,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,2.89562681343828,4.35920804243913,3.67093504323363,1.56478268869608,3.48840250208714,1.97717564461025,3.11087838518853,1.53985063787899,1.43752564364972,0,0,0,0.257259436035947,0,0,6.47412674750713,4.7609188134483,4.43681982454325,1.0165335962074,1.77858959222228,1.7997994345628,0.988866362566974,4.2628806896766,8.08920298399693,13.0634223809329,3.62913643079672,2.56511282830212,2.73422449756797,13.4255962669788,15.2399293256613,14.5764051065795,11.2139201091337,22.0612508786405,18.7196997698961,18.0039146700115,13.8245879930619,5.53922408466814,5.6722339033494,8.85552729946492,17.8677119360884,13.5063026407603,19.0997809721013,12.0797720044204,12.386336229522,7.45597783301202,1.06016670666458,7.48158445057177,0.579728977403356,0,0,0,0,0,4.91555470461132,1.02258193546835,0,0.70667914902068,9.43650912503759,1.28326477414318,0,7.11066703153331,0,0,0,1.59857431606684,0.776813650941515,3.41416919849097,2.08182392119363,0.913396434936424,1.15307748628029,1.80867168663147,1.41106448562846,1.63366568728578,0,2.74738778147832,0,1.13236794963186,0.662524555381181,0,0,8.19786231632332,9.42510180660548,0.255457055208591,0.11981512450592,0,0.127070227073065,18.4242486467932,579.195763168381,125.0260803523,53.3640662990289,55.7459696980121,58.3884405212364,163.214710646164,2.64782346010822,1.36847667671102,1.0108910337347,402.785712166711,1.69156575851515,2.06911893990126,2.34080768746954,2.41127708537144,2.31324097114515,3.20284300712124,4.12287588062807,93.9093235782627,1.5089759505299,2.26927296201383,3.34307135911503,1.97276159184817,1.94633074457919,3.1342694986995,3.2925141825271,1.99034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.946978942340841,0,0,0.465067889500816,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,61.4046649807252,6.68879980465349,0.330418782983798,0,2.55945900642281,1.85789337488351,1.15980715189884,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14708 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z483 | |||
|association_with_transcript=11bp_to_ENSMUST00000126317_5end | |||
|cluster_id=chr10:80477623..80477646,- | |||
|description=CAGE_peak_1_at_Gng7_5end | |||
|id=chr10:80477623..80477646,- | |||
|ontology_enrichment_celltype=CL:0000221!3.50e-16!44;CL:0000133!3.50e-16!44;CL:0002319!9.89e-16!43;CL:0000540!2.69e-15!33;CL:0000047!2.69e-15!33;CL:0000031!2.69e-15!33;CL:0000404!2.69e-15!33;CL:0000393!4.84e-13!39;CL:0000211!4.84e-13!39;CL:0000055!5.23e-13!50;CL:0000117!1.21e-10!23;CL:0000337!1.21e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.68e-17,44;CL:0000133,2.68e-17,44;CL:0002319,8.19e-17,43;CL:0000540,2.41e-16,33;CL:0000047,2.41e-16,33;CL:0000031,2.41e-16,33;CL:0000404,2.41e-16,33;CL:0000393,2.64e-14,39;CL:0000211,2.64e-14,39;CL:0000117,2.46e-11,23;CL:0000337,2.46e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.56e-35!102;UBERON:0000924!4.56e-35!102;UBERON:0006601!4.56e-35!102;UBERON:0000073!6.55e-33!75;UBERON:0001016!6.55e-33!75;UBERON:0001017!7.89e-33!73;UBERON:0005743!7.89e-33!73;UBERON:0002346!1.32e-25!71;UBERON:0003075!1.32e-25!71;UBERON:0007284!1.32e-25!71;UBERON:0000033!6.93e-25!63;UBERON:0001049!4.54e-23!52;UBERON:0005068!4.54e-23!52;UBERON:0006241!4.54e-23!52;UBERON:0007135!4.54e-23!52;UBERON:0000955!3.60e-22!50;UBERON:0006238!3.60e-22!50;UBERON:0002616!1.29e-21!49;UBERON:0003056!1.42e-19!49;UBERON:0003080!1.00e-17!40;UBERON:0002020!1.70e-17!34;UBERON:0002780!3.89e-17!39;UBERON:0001890!3.89e-17!39;UBERON:0006240!3.89e-17!39;UBERON:0002791!4.29e-15!29;UBERON:0003528!4.29e-15!29;UBERON:0001893!4.29e-15!29;UBERON:0000153!1.04e-14!94;UBERON:0007811!5.39e-14!86;UBERON:0000956!5.81e-11!21;UBERON:0001869!5.81e-11!21;UBERON:0000203!5.81e-11!21;UBERON:0002619!5.06e-10!17;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.29e-38,95;UBERON:0000924,3.29e-38,95;UBERON:0006601,3.29e-38,95;UBERON:0001016,2.57e-35,75;UBERON:0001017,3.14e-35,73;UBERON:0010371,2.36e-30,73;UBERON:0002346,1.31e-28,64;UBERON:0003075,1.31e-28,64;UBERON:0007284,1.31e-28,64;UBERON:0000073,5.63e-26,54;UBERON:0001049,1.03e-24,52;UBERON:0005068,1.03e-24,52;UBERON:0006241,1.03e-24,52;UBERON:0007135,1.03e-24,52;UBERON:0000955,7.91e-22,47;UBERON:0006238,7.91e-22,47;UBERON:0002616,3.05e-21,46;UBERON:0003056,5.94e-21,49;UBERON:0003080,5.85e-19,40;UBERON:0002020,1.03e-18,34;UBERON:0002780,2.51e-18,39;UBERON:0001890,2.51e-18,39;UBERON:0006240,2.51e-18,39;UBERON:0003528,3.98e-16,29;UBERON:0002791,3.98e-16,29;UBERON:0001893,3.98e-16,29;UBERON:0010314,7.14e-15,92;UBERON:0000956,1.11e-11,21;UBERON:0001869,1.11e-11,21;UBERON:0000203,1.11e-11,21;UBERON:0002619,1.14e-10,17;UBERON:0002021,3.88e-08,10;UBERON:0000411,3.88e-08,10;UBERON:0001950,3.88e-08,10 | |||
|phase1_expression=5.2849119544582,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,12.0761472014519,0.397163804803541,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,2.89562681343828,4.35920804243913,3.67093504323363,1.56478268869608,3.48840250208714,1.97717564461025,3.11087838518853,1.53985063787899,1.43752564364972,0,0,0,0.257259436035947,0,0,6.47412674750713,4.7609188134483,4.43681982454325,1.0165335962074,1.77858959222228,1.7997994345628,0.988866362566974,4.2628806896766,8.08920298399693,13.0634223809329,3.62913643079672,2.56511282830212,2.73422449756797,13.4255962669788,15.2399293256613,14.5764051065795,11.2139201091337,22.0612508786405,18.7196997698961,18.0039146700115,13.8245879930619,5.53922408466814,5.6722339033494,8.85552729946492,17.8677119360884,13.5063026407603,19.0997809721013,12.0797720044204,12.386336229522,7.45597783301202,1.06016670666458,7.48158445057177,0.579728977403356,0,0,0,0,0,4.91555470461132,1.02258193546835,0,0.70667914902068,9.43650912503759,1.28326477414318,0,7.11066703153331,0,0,0,1.59857431606684,0.776813650941515,3.41416919849097,2.08182392119363,0.913396434936424,1.15307748628029,1.80867168663147,1.41106448562846,1.63366568728578,0,2.74738778147832,0,1.13236794963186,0.662524555381181,0,0,8.19786231632332,9.42510180660548,0.255457055208591,0.11981512450592,0,0.127070227073065,18.4242486467932,579.195763168381,125.0260803523,53.3640662990289,55.7459696980121,58.3884405212364,163.214710646164,2.64782346010822,1.36847667671102,1.0108910337347,402.785712166711,1.69156575851515,2.06911893990126,2.34080768746954,2.41127708537144,2.31324097114515,3.20284300712124,4.12287588062807,93.9093235782627,1.5089759505299,2.26927296201383,3.34307135911503,1.97276159184817,1.94633074457919,3.1342694986995,3.2925141825271,1.99034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.946978942340841,0,0,0.465067889500816,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,61.4046649807252,6.68879980465349,0.330418782983798,0,2.55945900642281,1.85789337488351,1.15980715189884,0.605050573870028,0.889512175379481,0.570676878337677,0,0.658795818896044,0.502670417600539,0.795825888164603,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,1.89667900953082,1.02823661348756,2.25415471346161,2.03651327845314,2.13347735884388,0.98190147846446,0.316182685621286,0.442830443938806,0.31399745568275,0,0.296452627087149,0,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,1.13694847062291,1.95557971730431,1.69745085775188,1.40814148973101,1.34005005953453,1.42826184531608,0.390267295715598,0.630540576424764,1.10732344824387,0.637819074629948,0.983179888294428,0,1.3018415272336,1.50791283939272,0,17.7035138286853,14.0727740615414,21.3532284683763,19.8087750340823,1.14754461763673,1.00988370881749,8.51872192423893,9.76096860741596,12.4945570685023,17.9226598464414,15.1503098376028,13.0215204162863,9.71545684019746,12.5670018901864,13.8350722281283,13.8168166061377,1.70328102249922,3.38324646967785,2.11753047159649,1.81467135269789,0,2.18502572539483,2.11626489875326,1.88605079755898,3.2483208216885,2.76691633149535,1.80899805217755,3.99887102425256,2.13898427030833,1.26414703174326,0,1.03135543248187,2.7235168460303,2.70091641046965,2.8458910432206,2.7863814554107,3.01478397191865,2.14042581122485,2.13913726782757,3.04464949114599,0,0.21183207086382,0.441056796109924,1.81374878235628,4.19807509409354,1.68876189798836,1.07435109602823,1.47726809770555,0.582961673259701,21.6947603352296,0.341741761595705,2.27025554759545,0.555583582109135,0.188368457004691,0,0,0.339956859987711,0.279902904647316,0,0,1.10717597753397,1.62655573701479,0.756037385752609,1.04544148007234,1.09181281873089,0.134864346384821,0.826534557253359,0.523511883968059,0.388844919875379,3.72803587852155,1.69107881605257,1.64468200648377,0.66183396182839,1.55560950675238,1.03327858782185,0.506868376472335,2.46450201156083,1.69265700297135,6.8158573876712,2.65742532908607,2.01621004380506,0.316011120628178,0.608175645870493,1.1298205288131,0.77952493786677,1.9692936523423,0.993406773906324,1.20195449519969,0.738447635872886,0.403865799792591,1.600342939755,0.806609481094724,0.38983152295901,0.192423683280659,0.701261413089414,0.680191150845634,0.221985953374065,0.269141569828427,0.335769232728157,2.31827512838629,0.750729901804728,1.09890974560359,0.428736758158132,0.501572104035363,59.298943474792,57.5406545633971,44.6858500482729,30.5898664571764,27.4033007908257,24.9279986138601,24.300810008345,27.9199145999017,29.4542565839733,32.6188996403647,1.86817225651518,2.39414924040619,2.73173769206615,1.70174701947806,3.5634237646757,3.12533964365024,2.66696073361938,2.88449080134452,1.60459604795908,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| |||
|short_description=p1@Gng7 | |||
}} |
Revision as of 20:41, 4 August 2015
Short description: | p1@Gng7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gng7_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 11bp_to_ENSMUST00000126317_5end |
EntrezGene: | 14708 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.68e-17 | 44 |
neurectodermal cell | 2.68e-17 | 44 |
neural cell | 8.19e-17 | 43 |
neuron | 2.41e-16 | 33 |
neuronal stem cell | 2.41e-16 | 33 |
neuroblast | 2.41e-16 | 33 |
electrically signaling cell | 2.41e-16 | 33 |
electrically responsive cell | 2.64e-14 | 39 |
electrically active cell | 2.64e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.46e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.46e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.29e-38 | 95 |
ectoderm | 3.29e-38 | 95 |
presumptive ectoderm | 3.29e-38 | 95 |
nervous system | 2.57e-35 | 75 |
central nervous system | 3.14e-35 | 73 |
ecto-epithelium | 2.36e-30 | 73 |
neurectoderm | 1.31e-28 | 64 |
neural plate | 1.31e-28 | 64 |
presumptive neural plate | 1.31e-28 | 64 |
regional part of nervous system | 5.63e-26 | 54 |
neural tube | 1.03e-24 | 52 |
neural rod | 1.03e-24 | 52 |
future spinal cord | 1.03e-24 | 52 |
neural keel | 1.03e-24 | 52 |
brain | 7.91e-22 | 47 |
future brain | 7.91e-22 | 47 |
regional part of brain | 3.05e-21 | 46 |
pre-chordal neural plate | 5.94e-21 | 49 |
anterior neural tube | 5.85e-19 | 40 |
gray matter | 1.03e-18 | 34 |
regional part of forebrain | 2.51e-18 | 39 |
forebrain | 2.51e-18 | 39 |
future forebrain | 2.51e-18 | 39 |
brain grey matter | 3.98e-16 | 29 |
regional part of telencephalon | 3.98e-16 | 29 |
telencephalon | 3.98e-16 | 29 |
structure with developmental contribution from neural crest | 7.14e-15 | 92 |
cerebral cortex | 1.11e-11 | 21 |
cerebral hemisphere | 1.11e-11 | 21 |
pallium | 1.11e-11 | 21 |
regional part of cerebral cortex | 1.14e-10 | 17 |
occipital lobe | 3.88e-08 | 10 |
visual cortex | 3.88e-08 | 10 |
neocortex | 3.88e-08 | 10 |