FFCP PHASE1:Hg19::chr2:234077635..234077640,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1033 | |||
|description=CAGE_peak_at_chr2:234077635..234077640,+ | |||
|id=chr2:234077635..234077640,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.66e-23;3!UBERON:0003057;3.66e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!1.58e-58!9;UBERON:0000125!1.58e-58!9;UBERON:0001049!2.95e-54!57;UBERON:0005068!2.95e-54!57;UBERON:0006241!2.95e-54!57;UBERON:0007135!2.95e-54!57;UBERON:0002298!4.35e-51!8;UBERON:0002616!6.36e-47!59;UBERON:0002420!1.70e-44!9;UBERON:0007245!1.70e-44!9;UBERON:0010009!1.70e-44!9;UBERON:0010011!1.70e-44!9;UBERON:0000454!1.70e-44!9;UBERON:0009663!2.92e-42!7;UBERON:0000955!3.52e-39!69;UBERON:0006238!3.52e-39!69;UBERON:0001017!1.73e-36!82;UBERON:0003075!4.04e-35!86;UBERON:0007284!4.04e-35!86;UBERON:0005743!1.10e-34!86;UBERON:0002346!1.96e-33!90;UBERON:0002020!2.32e-32!34;UBERON:0003528!2.32e-32!34;UBERON:0000073!3.62e-31!94;UBERON:0001016!3.62e-31!94;UBERON:0002780!4.97e-31!41;UBERON:0001890!4.97e-31!41;UBERON:0006240!4.97e-31!41;UBERON:0003080!2.94e-30!42;UBERON:0007023!1.05e-28!115;UBERON:0002791!1.21e-27!33;UBERON:0003076!4.48e-27!15;UBERON:0003057!4.48e-27!15;UBERON:0001893!8.36e-27!34;UBERON:0006331!2.07e-26!3;UBERON:0001896!2.91e-26!3;UBERON:0005290!2.91e-26!3;UBERON:0010096!2.91e-26!3;UBERON:0000988!5.75e-26!3;UBERON:0004733!4.78e-25!12;UBERON:0002028!4.78e-25!12;UBERON:0007277!4.78e-25!12;UBERON:0000033!2.02e-23!123;UBERON:0004732!4.32e-23!13;UBERON:0000153!3.38e-22!129;UBERON:0007811!3.38e-22!129;UBERON:0003056!2.58e-20!61;UBERON:0001869!4.37e-19!32;UBERON:0000369!7.03e-19!4;UBERON:0002435!7.03e-19!4;UBERON:0000204!7.03e-19!4;UBERON:0010082!7.03e-19!4;UBERON:0002148!2.24e-18!2;UBERON:0009662!2.24e-18!2;UBERON:0001875!3.45e-18!2;UBERON:0006514!3.45e-18!2;UBERON:0004121!3.90e-16!169;UBERON:0000924!1.08e-15!173;UBERON:0006601!1.08e-15!173;UBERON:0000349!1.35e-15!5;UBERON:0000025!7.83e-14!194;UBERON:0005383!6.23e-12!3;UBERON:0005382!6.23e-12!3;UBERON:0000477!1.35e-10!286;UBERON:0004111!1.77e-10!241;UBERON:0003112!7.50e-10!1;UBERON:0000032!7.50e-10!1;UBERON:0005253!7.50e-10!1;UBERON:0003128!7.50e-10!1;UBERON:0002241!7.50e-10!1;UBERON:0001703!7.50e-10!1;UBERON:0004761!7.50e-10!1;UBERON:0009617!7.50e-10!1;UBERON:0002038!8.17e-10!1;UBERON:0009661!8.17e-10!1;UBERON:0001874!1.15e-09!1;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1;UBERON:0002680!4.95e-09!9;UBERON:0001895!4.95e-09!9;UBERON:0010092!4.95e-09!9;UBERON:0000064!5.38e-08!219;UBERON:0000475!1.79e-07!365;UBERON:0000483!2.07e-07!309;UBERON:0000119!2.64e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.09e-44;6!UBERON:0002148;3.61e-34;2!UBERON:0006331;3.61e-34;2!UBERON:0009662;3.61e-34;2!UBERON:0000988;2.62e-23;3!UBERON:0001896;3.66e-23;3!UBERON:0002240;3.66e-23;3!UBERON:0005174;3.66e-23;3!UBERON:0005290;3.66e-23;3!UBERON:0001137;3.66e-23;3!UBERON:0004733;4.86e-23;12!UBERON:0002028;4.86e-23;12!UBERON:0004732;2.28e-21;13!UBERON:0002680;1.04e-08;9!UBERON:0000125;1.04e-08;9!UBERON:0002308;1.04e-08;9!UBERON:0001895;1.04e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,9.76e-45,6;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0002148,3.61e-34,2;UBERON:0006331,3.61e-34,2;UBERON:0009662,3.61e-34,2;UBERON:0000988,2.62e-23,3;UBERON:0001896,3.27e-23,3;UBERON:0005290,3.27e-23,3;UBERON:0010096,3.27e-23,3;UBERON:0002240,4.09e-23,3;UBERON:0005174,4.09e-23,3;UBERON:0001137,4.09e-23,3;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0002680,1.04e-08,9;UBERON:0000125,1.04e-08,9;UBERON:0002308,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,3.49063982176186,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,1.72022758707021,0.776503360757966,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:234077635..234077640,+ | |||
}} |
Revision as of 09:16, 21 January 2014
Short description: | p@chr2:234077635..234077640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:234077635..234077640, + |
Coexpression cluster: | C1033_locus_medulla_spinal_globus_amygdala_pineal_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 9.76e-45 | 6 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
locus ceruleus | 3.61e-34 | 2 |
brainstem nucleus | 3.61e-34 | 2 |
hindbrain nucleus | 3.61e-34 | 2 |
pons | 2.62e-23 | 3 |
medulla oblongata | 3.27e-23 | 3 |
myelencephalon | 3.27e-23 | 3 |
future myelencephalon | 3.27e-23 | 3 |
spinal cord | 4.09e-23 | 3 |
dorsal region element | 4.09e-23 | 3 |
dorsum | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
regional part of metencephalon | 1.04e-08 | 9 |
neural nucleus | 1.04e-08 | 9 |
nucleus of brain | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |