FFCP PHASE1:Hg19::chr2:207629997..207630030,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17836 | |||
|TSSclassifier=strong | |||
|UniProt=B4DY40 | |||
|association_with_transcript=0bp_to_ENST00000432911,ENST00000436472,ENST00000454776,ENST00000471988_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_MDH1B_5end | |||
|id=chr2:207629997..207630030,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.48e-10;82 | |||
|ontology_enrichment_disease=DOID:0050687!9.30e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.83e-27!86;UBERON:0000073!7.28e-27!94;UBERON:0001016!7.28e-27!94;UBERON:0001017!1.12e-25!82;UBERON:0000955!2.85e-21!69;UBERON:0006238!2.85e-21!69;UBERON:0000924!1.56e-19!173;UBERON:0006601!1.56e-19!173;UBERON:0004121!3.36e-19!169;UBERON:0001049!4.63e-19!57;UBERON:0005068!4.63e-19!57;UBERON:0006241!4.63e-19!57;UBERON:0007135!4.63e-19!57;UBERON:0002616!8.75e-19!59;UBERON:0000033!3.34e-18!123;UBERON:0000153!4.47e-18!129;UBERON:0007811!4.47e-18!129;UBERON:0002346!5.74e-17!90;UBERON:0003075!8.68e-17!86;UBERON:0007284!8.68e-17!86;UBERON:0002780!1.77e-16!41;UBERON:0001890!1.77e-16!41;UBERON:0006240!1.77e-16!41;UBERON:0003080!1.69e-15!42;UBERON:0003056!3.98e-14!61;UBERON:0007023!1.75e-13!115;UBERON:0001893!2.09e-13!34;UBERON:0002020!2.30e-13!34;UBERON:0003528!2.30e-13!34;UBERON:0001869!5.74e-13!32;UBERON:0002791!6.77e-13!33;UBERON:0000475!1.29e-12!365;UBERON:0000956!7.90e-10!25;UBERON:0000203!7.90e-10!25;UBERON:0000481!1.51e-09!347;UBERON:0002619!1.75e-09!22;UBERON:0001950!1.54e-08!20;UBERON:0000119!2.12e-08!312;UBERON:0000483!4.91e-08!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.60e-14;34!UBERON:0002020;3.60e-14;34!UBERON:0002780;3.67e-14;41!UBERON:0001890;3.67e-14;41!UBERON:0000073;3.71e-14;53!UBERON:0002616;3.71e-14;53!UBERON:0001869;3.82e-14;32!UBERON:0001893;4.82e-14;34!UBERON:0002791;2.96e-13;32!UBERON:0002619;3.83e-13;22!UBERON:0000956;5.72e-12;25!UBERON:0000203;5.72e-12;25!UBERON:0000955;5.92e-12;68!UBERON:0001017;8.27e-12;75!UBERON:0001016;1.33e-11;83!UBERON:0001950;1.34e-11;20!UBERON:0002298;3.26e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.78e-31,81;UBERON:0001016,8.54e-31,89;UBERON:0000955,8.67e-26,68;UBERON:0006238,8.67e-26,68;UBERON:0001049,2.42e-25,56;UBERON:0005068,2.42e-25,56;UBERON:0006241,2.42e-25,56;UBERON:0007135,2.42e-25,56;UBERON:0000073,1.25e-23,53;UBERON:0002616,1.25e-23,53;UBERON:0002346,1.28e-23,86;UBERON:0003075,1.43e-23,82;UBERON:0007284,1.43e-23,82;UBERON:0004121,2.65e-23,171;UBERON:0000924,2.65e-23,171;UBERON:0006601,2.65e-23,171;UBERON:0002780,1.42e-20,41;UBERON:0001890,1.42e-20,41;UBERON:0003080,1.42e-20,41;UBERON:0006240,1.42e-20,41;UBERON:0003056,5.71e-20,61;UBERON:0010371,9.78e-20,104;UBERON:0007023,4.19e-17,114;UBERON:0001893,2.04e-16,34;UBERON:0003528,2.34e-16,34;UBERON:0002020,2.34e-16,34;UBERON:0001869,2.48e-16,32;UBERON:0011216,2.82e-16,223;UBERON:0010314,2.89e-15,132;UBERON:0002791,8.59e-15,32;UBERON:0002619,3.71e-13,22;UBERON:0000956,4.32e-12,25;UBERON:0000203,4.32e-12,25;UBERON:0001950,1.13e-11,20;UBERON:0002298,2.58e-07,6 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,7.59899634504932,0,0.783556884599516,0.737201809504527,0,0.218441372130172,0,2.47532705920093,0.662794751455832,0.672325146451775,0.602694528023977,0,0.487932798790507,1.23121058076788,0.612002073732759,0.313454721478088,1.71741592278634,0.821246550437305,0.753255837568817,0,0.164201178899891,0.157421562627358,0,0,0,0,0.30120591877825,0,1.54934401160603,1.13735385989937,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.790152254325231,0,0,0.205601498999509,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0.444859689486181,0.535081656179426,0,0,0,0,0.253019692019503,0,1.30216690771284,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0.201606743224732,0,0.434473211648397,0,2.01210257911091,0.383587685530591,1.0843174571537,1.50401373190767,1.01392563272577,0.795285947051099,0.486634870302636,4.53767122387526,1.10864698731282,2.10803485663503,12.8359493987758,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0.775250277507987,0.35576626268671,0,0,0,0,0.367663080345869,0,0.803697554556718,0.898117490504679,0.450445921933289,0,0,0.549605231791222,0,0,0.872188104285069,0,0.25326102332916,1.32409180813219,0.860509862246441,0,0.560677600142307,0,0.49333509683432,0.933633106199299,0.942974704487816,0,1.21085942115945,1.15235184896,0.468642863667593,0.624320153660641,1.71141546463335,0.149448680551801,0.822041490506354,1.29498355494505,0.561803226808994,1.02077085627447,0.245668634623536,1.13658359293342,0,0.741800787835671,0.910161361938026,0,0.336672227908132,0.375355559615893,0.277064115484183,0.438977620880838,0.612975591598039,0,0.226864366320042,0.358779271377724,0.85422955527427,0.211931901159562,0,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,1.26216887122057,0.552299391853796,2.58633690910099,0,0.906768884048762,1.01736355386293,0.57978255948989,0.545492241181669,0,0.487894824518382,1.59035721985782,1.2781333715647,1.45125477021519,1.26160425437814,2.55484151353081,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.473227200159376,0.168584690078102,0,0.110293972732394,0.653638332277218,0,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0.882926198829301,0.614942192715568,0.857839051492628,0.439001141634502,0,0.402115889646523,1.29623823221941,0,0,0,1.73895607462615,0.352226082707465,0.433099343283221,0,0.190254152234598,1.58040879591855,1.71697232418975,0,0,0,1.87467667973554,0.503946384596579,0.141775097242386,0.53735113621709,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0.144119953416961,0,0.317489471460845,2.29193055334967,2.34434894420094,0,0.514137463516618,0.300343057843917,1.71495859578347,0.784917590417525,0.87192013766656,1.39342743059805,0.775630294546667,0,0,1.59562869950922,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.579125226670317,1.02738161275192,0.716243852959582,0.560425719967636,0.394061520403854,0,0,2.03275699377971,2.60279707715243,0.773288812777695,2.34522771468088,0.637938751653163,0,0,0,2.33113834266366,1.50051156317903,0.542530047399471,0.207970861530807,0.178428988797162,0.315404830067869,0.468565659970853,2.10662269809403,0,2.0694614258501,1.32845119707087,0.553107505625109,1.04260337361699,1.56640925970192,0.343143423810856,0.206768026122887,0.215714200818617,0,0.606255142892519,0,0.604780586659361,0.496215615637554,0.306923946576125,0.280660094433074,0.512556597022804,0,0.321707842287215,1.48418066444991,0.154209693802656,0.177561725313127,0.328508624055237,0.519254429183621,0.232420756919918,0.241718899183244,0.200506470303285,0.184161977871793,0.68888668898764,0.364182336013434,0.524497659837696,0.451199612907412,0.231046011313244,0,0,0.73886140225013,0,0,0.431831832204279,0,1.08378575017541,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0,1.28225062558195,1.96808787419823,4.88067591996455,0.618246069886334,0.54941678891006,1.32015199872941,0,0,0,0.96670718292122,2.46477787383431,0.921022048356777,0.275673144969061,1.71872391789238,1.0151168573996,0.511359764496605,0.979352392114111,0.165284915360978,0,0.765676274967505,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,1.48863347743867,0.949138274156178,0.571890581771475,0,1.28381696410176,0.636406495851874,0,1.61885211824983,0.823611089208164,1.06031162111118,0,0,0.421258456238981,0,0,0,1.36499911407986,0.565621727814851,0,0,1.99031692572366,0.876901770507525,0,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,0.573645408816206,0.491245205065606,0.35667105148125,1.06428319221179,0.422215270595328,1.64647446479951,0.379473173765715,0,0.0962221127255121,0,0,0.941438007767792,0.43050537267123,0,0.443430153536676,0.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| |||
|short_description=p1@MDH1B | |||
}} |
Revision as of 08:05, 21 January 2014
Short description: | p1@MDH1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MDH1B_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000432911, ENST00000436472, ENST00000454776, ENST00000471988_5end |
EntrezGene: | MDH1B |
HGNC: | 17836 |
UniProt: | B4DY40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data