FFCP PHASE1:Hg19::chr2:20251730..20251739,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6924 | |||
|TSSclassifier=strong | |||
|UniProt=Q15012,Q6IBP4 | |||
|association_with_transcript=49bp_to_ENST00000175091,NM_014713,uc002rdm.2,uc002rdn.2,uc010yjx.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_LAPTM4A_5end | |||
|id=chr2:20251730..20251739,- | |||
|ontology_enrichment_celltype=CL:0002057!4.86e-14!42;CL:0000860!6.95e-13!45;CL:0000766!1.28e-12!76;CL:0000839!2.00e-12!70;CL:0000557!3.43e-12!71;CL:0002274!4.05e-12!5;CL:0000457!4.05e-12!5;CL:0002191!4.05e-12!5;CL:0000097!4.05e-12!5;CL:0000831!4.05e-12!5;CL:0002028!4.05e-12!5;CL:0002194!4.06e-08!63;CL:0000576!4.06e-08!63;CL:0000040!4.06e-08!63;CL:0000559!4.06e-08!63;CL:0002009!8.84e-08!65;CL:0002031!9.04e-08!124;CL:0000738!3.39e-07!140;CL:0000763!3.46e-07!112;CL:0000049!3.46e-07!112;CL:0000163!9.83e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000632;9.90e-11;3!CL:0000097;5.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,8.99e-11,3;CL:0000097,5.08e-07,5;CL:0002028,5.08e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.37e-29;1!UBERON:0007297;2.05e-15;2!UBERON:0009117;2.24e-12;10!UBERON:0005564;2.24e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!4.11e-12!3;UBERON:0004054!4.11e-12!3;UBERON:0001474!5.91e-12!86;UBERON:0002371!1.05e-11!80;UBERON:0004765!1.70e-09!101;UBERON:0001434!1.70e-09!101;UBERON:0005904!3.49e-09!4;UBERON:0002405!9.19e-09!115;UBERON:0003135!1.28e-08!11;UBERON:0002390!2.97e-08!102;UBERON:0003061!2.97e-08!102;UBERON:0003101!2.43e-07!22;UBERON:0000079!2.43e-07!22;UBERON:0002193!3.81e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.26e-41;11!UBERON:0006947;2.64e-38;3!UBERON:0004054;2.64e-38;3!UBERON:0000473;1.97e-32;8!UBERON:0001000;2.37e-29;1!UBERON:0000998;2.37e-29;1!UBERON:0006868;2.37e-29;1!UBERON:0005352;2.37e-29;1!UBERON:0005904;4.86e-29;4!UBERON:0003101;4.86e-21;22!UBERON:0000079;4.86e-21;22!UBERON:0000991;7.13e-13;21!UBERON:0000058;2.81e-12;10!UBERON:0003133;3.88e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.26e-41,11;UBERON:0006947,2.64e-38,3;UBERON:0004054,2.64e-38,3;UBERON:0000473,1.59e-32,8;UBERON:0000998,1.33e-29,1;UBERON:0006868,1.33e-29,1;UBERON:0001000,4.20e-29,1;UBERON:0005352,4.20e-29,1;UBERON:0005904,4.86e-29,4;UBERON:0003101,4.86e-21,22;UBERON:0000079,4.86e-21,22;UBERON:0000991,6.58e-13,21;UBERON:0009196,6.58e-13,21;UBERON:0009117,6.58e-13,21;UBERON:0005564,6.58e-13,21;UBERON:0004176,2.35e-12,22;UBERON:0003133,6.16e-10,48;UBERON:0005156,3.63e-08,59;UBERON:0000990,3.63e-08,59;UBERON:0000058,6.57e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43979526614655,3.21556956187414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@LAPTM4A | |||
}} |
Revision as of 01:55, 21 January 2014
Short description: | p10@LAPTM4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LAPTM4A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 49bp_to_ENST00000175091, NM_014713, uc002rdm.2, uc002rdn.2, uc010yjx.1_5end |
EntrezGene: | LAPTM4A |
HGNC: | 6924 |
UniProt: | Q15012Q6IBP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 8.99e-11 | 3 |
mast cell | 5.08e-07 | 5 |
basophil mast progenitor cell | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.26e-41 | 11 |
male genital duct | 2.64e-38 | 3 |
internal male genitalia | 2.64e-38 | 3 |
testis | 1.59e-32 | 8 |
seminal vesicle | 1.33e-29 | 1 |
seminal fluid secreting gland | 1.33e-29 | 1 |
vas deferens | 4.20e-29 | 1 |
spermatic cord | 4.20e-29 | 1 |
duct of male reproductive system | 4.86e-29 | 4 |
male organism | 4.86e-21 | 22 |
male reproductive system | 4.86e-21 | 22 |
gonad | 6.58e-13 | 21 |
indifferent external genitalia | 6.58e-13 | 21 |
indifferent gonad | 6.58e-13 | 21 |
gonad primordium | 6.58e-13 | 21 |
external genitalia | 2.35e-12 | 22 |
reproductive organ | 6.16e-10 | 48 |
reproductive structure | 3.63e-08 | 59 |
reproductive system | 3.63e-08 | 59 |
duct | 6.57e-07 | 19 |