FFCP PHASE1:Hg19::chr2:201997603..201997615,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENST00000470178_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_44_at_CFLAR_5end | |||
|id=chr2:201997603..201997615,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.80e-51!42;CL:0000860!2.15e-47!45;CL:0002009!6.89e-44!65;CL:0002194!9.60e-43!63;CL:0000576!9.60e-43!63;CL:0000040!9.60e-43!63;CL:0000559!9.60e-43!63;CL:0000557!7.03e-42!71;CL:0000766!1.43e-40!76;CL:0000839!5.44e-40!70;CL:0000738!1.65e-36!140;CL:0002087!9.97e-32!119;CL:0000763!7.33e-31!112;CL:0000049!7.33e-31!112;CL:0002031!2.13e-30!124;CL:0002032!1.57e-27!165;CL:0000837!1.57e-27!165;CL:0000037!4.62e-27!172;CL:0000566!4.62e-27!172;CL:0000988!8.50e-25!182;CL:0000990!1.12e-13!8;CL:0000451!5.88e-11!10;CL:0000453!4.28e-09!5;CL:0000134!1.25e-07!358;CL:0002320!3.08e-07!365;CL:0000840!4.08e-07!5;CL:0001029!4.08e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-78;33!CL:0002057;1.36e-78;33!CL:0000473;1.26e-54;39!CL:0000234;1.26e-54;39!CL:0000576;7.17e-34;48!CL:0000453;2.06e-24;5!CL:0000766;6.13e-24;69!CL:0000990;1.17e-20;8!CL:0000451;6.97e-17;10!CL:0000738;3.79e-11;136!CL:0002087;1.49e-10;104!CL:0000763;6.68e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.75e-67,42;CL:0002057,7.75e-67,42;CL:0000473,4.77e-58,48;CL:0000234,4.77e-58,48;CL:0002009,5.96e-54,61;CL:0000557,1.05e-53,67;CL:0002194,1.32e-50,59;CL:0000576,1.32e-50,59;CL:0000040,1.32e-50,59;CL:0000559,1.32e-50,59;CL:0000839,1.30e-49,66;CL:0000766,3.15e-45,72;CL:0000763,6.25e-42,108;CL:0000049,6.25e-42,108;CL:0000738,1.56e-32,136;CL:0002031,1.76e-28,120;CL:0002032,7.05e-27,161;CL:0000837,7.05e-27,161;CL:0000037,1.36e-25,168;CL:0002087,2.20e-24,115;CL:0000453,2.62e-24,5;CL:0000988,4.34e-24,177;CL:0000990,1.27e-20,8;CL:0000451,7.46e-17,10;CL:0000134,6.29e-10,354;CL:0002320,1.19e-09,361;CL:0000219,1.14e-08,386;CL:0000034,5.71e-08,441;CL:0000048,1.83e-07,427;CL:0000723,2.69e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.48e-49;42!CL:0000049;1.03e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.81e-39!112;UBERON:0002390!5.06e-38!102;UBERON:0003061!5.06e-38!102;UBERON:0002371!5.90e-36!80;UBERON:0002405!8.96e-36!115;UBERON:0001474!1.08e-32!86;UBERON:0004765!3.06e-26!101;UBERON:0001434!3.06e-26!101;UBERON:0003081!3.73e-13!216;UBERON:0002204!8.60e-12!167;UBERON:0004177!5.97e-08!7;UBERON:0002106!1.16e-07!3;UBERON:0004854!1.16e-07!3;UBERON:0009034!1.16e-07!3;UBERON:0002095!1.16e-07!3;UBERON:0004782!1.16e-07!3;UBERON:0003281!1.16e-07!3;UBERON:0009664!1.16e-07!3;UBERON:0002296!1.16e-07!3;UBERON:0005602!1.16e-07!3;UBERON:0001179!1.16e-07!3;UBERON:0006293!1.16e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.55e-47,76;UBERON:0001474,2.62e-43,82;UBERON:0004765,3.68e-39,90;UBERON:0002405,8.71e-38,93;UBERON:0002390,1.11e-35,98;UBERON:0003061,1.11e-35,98;UBERON:0001434,6.74e-35,100;UBERON:0002193,4.76e-32,108;UBERON:0002204,2.15e-19,167;UBERON:0003081,2.97e-15,203;UBERON:0002384,2.86e-09,371;UBERON:0000926,2.26e-08,315;UBERON:0004120,2.26e-08,315;UBERON:0006603,2.26e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,0.868043482863407,0,0,0,0.290796477559129,1.13362783106643,0,1.39457422143411,2.87817521615278,2.78735733805593,0.575384784644301,0,0.47296445977717,6.55016793399575,6.45484683583826,8.12558919566051,0.752969358170419,1.09162460023138,1.57306439111559,8.57034898638527,2.88836124368484,7.67204550958849,0.659702600373432,0.398927315243264,0.426224750532694,1.45104619314292,3.40431134814684,1.86846674698672,0,1.0429658368404,1.52032191293582,1.81619850790011,3.31449872388808,6.0127853613768,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,0.348259474598534,1.59549552622638,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.743155811443641,0,0,0,0,0,0,2.95597942737566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.369254416383208,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27450393947851,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28692679446655,2.12583744501381,2.61704630809351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p44@CFLAR | |||
}} |
Revision as of 07:54, 21 January 2014
Short description: | p44@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_44_at_CFLAR_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 8bp_to_ENST00000470178_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.75e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.75e-67 | 42 |
defensive cell | 4.77e-58 | 48 |
phagocyte | 4.77e-58 | 48 |
macrophage dendritic cell progenitor | 5.96e-54 | 61 |
granulocyte monocyte progenitor cell | 1.05e-53 | 67 |
monopoietic cell | 1.32e-50 | 59 |
monocyte | 1.32e-50 | 59 |
monoblast | 1.32e-50 | 59 |
promonocyte | 1.32e-50 | 59 |
myeloid lineage restricted progenitor cell | 1.30e-49 | 66 |
myeloid leukocyte | 3.15e-45 | 72 |
myeloid cell | 6.25e-42 | 108 |
common myeloid progenitor | 6.25e-42 | 108 |
leukocyte | 1.56e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 1.76e-28 | 120 |
hematopoietic oligopotent progenitor cell | 7.05e-27 | 161 |
hematopoietic multipotent progenitor cell | 7.05e-27 | 161 |
hematopoietic stem cell | 1.36e-25 | 168 |
nongranular leukocyte | 2.20e-24 | 115 |
Langerhans cell | 2.62e-24 | 5 |
hematopoietic cell | 4.34e-24 | 177 |
conventional dendritic cell | 1.27e-20 | 8 |
dendritic cell | 7.46e-17 | 10 |
mesenchymal cell | 6.29e-10 | 354 |
connective tissue cell | 1.19e-09 | 361 |
motile cell | 1.14e-08 | 386 |
stem cell | 5.71e-08 | 441 |
multi fate stem cell | 1.83e-07 | 427 |
somatic stem cell | 2.69e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.55e-47 | 76 |
bone element | 2.62e-43 | 82 |
skeletal element | 3.68e-39 | 90 |
immune system | 8.71e-38 | 93 |
hematopoietic system | 1.11e-35 | 98 |
blood island | 1.11e-35 | 98 |
skeletal system | 6.74e-35 | 100 |
hemolymphoid system | 4.76e-32 | 108 |
musculoskeletal system | 2.15e-19 | 167 |
lateral plate mesoderm | 2.97e-15 | 203 |
connective tissue | 2.86e-09 | 371 |
mesoderm | 2.26e-08 | 315 |
mesoderm-derived structure | 2.26e-08 | 315 |
presumptive mesoderm | 2.26e-08 | 315 |