FFCP PHASE1:Hg19::chr2:165424899..165424913,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2888 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4565 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=80bp_to_ENST00000469573_5end | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_6_at_GRB14_5end | |||
|id=chr2:165424899..165424913,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;6.43e-14;2!CL:0000182;3.07e-09;12!CL:0002563;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.43e-14,2;CL:0000182,3.41e-09,12;CL:0002563,1.31e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-18!115;UBERON:0004921!3.09e-09!129;UBERON:0004185!3.09e-09!129;UBERON:0000160!3.33e-07!27;UBERON:0000077!3.68e-07!130;UBERON:0001723!3.81e-07!3;UBERON:0001033!3.81e-07!3;UBERON:0010056!3.81e-07!3;UBERON:0000059!4.18e-07!11;UBERON:0001007!5.58e-07!155;UBERON:0001555!5.58e-07!155;UBERON:0007026!5.58e-07!155;UBERON:0005409!6.22e-07!35;UBERON:0004119!6.69e-07!169;UBERON:0000925!6.69e-07!169;UBERON:0006595!6.69e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;3.58e-26;1!UBERON:0001052;5.94e-26;4!UBERON:0004907;5.44e-21;5!UBERON:0000059;4.22e-10;11!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.23e-26,4;UBERON:0004907,4.92e-21,5;UBERON:0000059,4.03e-10,11;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.2085440906225,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,2.36225955635397,0,0,0.136203406111576,0,0,0,0,0,0,0,0.788057072991982,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.451261970095544,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,1.87574891109325,0,0,0,0,0,0,0,0,0,0.653150243690884,0.684466602170562,0.0673520530145875,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,2.44137706989443,0,0,0 | |||
|short_description=p6@GRB14 | |||
}} |
Revision as of 06:22, 21 January 2014
Short description: | p6@GRB14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GRB14_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 80bp_to_ENST00000469573_5end |
EntrezGene: | GRB14 |
HGNC: | 4565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.43e-14 | 2 |
hepatocyte | 3.41e-09 | 12 |
intestinal epithelial cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 5.23e-26 | 4 |
lower digestive tract | 4.92e-21 | 5 |
large intestine | 4.03e-10 | 11 |
intestinal mucosa | 1.31e-07 | 4 |
wall of intestine | 1.31e-07 | 4 |
gastrointestinal system mucosa | 1.31e-07 | 4 |
gastrointestinal system epithelium | 1.31e-07 | 4 |
intestinal epithelium | 1.31e-07 | 4 |