FFCP PHASE1:Hg19::chr2:16081912..16081931,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7559 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-114bp_to_uc010yjr.1_5end | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_2_at_MYCN_5end | |||
|id=chr2:16081912..16081931,+ | |||
|ontology_enrichment_celltype=CL:0000039!4.13e-10!7;CL:0000586!4.13e-10!7;CL:0000047!4.28e-10!8;CL:0000540!3.49e-08!6;CL:0000031!3.49e-08!6;CL:0000404!3.49e-08!6;CL:0002322!9.42e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.21e-22;7!CL:0000586;7.21e-22;7!CL:0002322;2.58e-16;5!CL:0002321;7.52e-13;15!CL:0000540;1.22e-12;6!CL:0000404;1.22e-12;6!CL:0002319;2.20e-07;25!CL:0002563;4.72e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.82e-22,7;CL:0000586,6.82e-22,7;CL:0000047,2.57e-17,8;CL:0002322,2.76e-16,5;CL:0000540,8.79e-13,6;CL:0000031,8.79e-13,6;CL:0000404,8.79e-13,6;CL:0000133,7.41e-08,59;CL:0002319,2.28e-07,25;CL:0002563,5.09e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;1.22e-12;6!UBERON:0009117;5.54e-11;10!UBERON:0005564;5.54e-11;10 | |||
|ontology_enrichment_disease=DOID:3095!2.44e-12!22;DOID:2994!2.44e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.77e-22;22!DOID:2994;7.77e-22;22!DOID:169;7.86e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.69e-22,22;DOID:2994,7.69e-22,22;DOID:169,7.96e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.54e-21!94;UBERON:0001016!7.54e-21!94;UBERON:0005743!1.13e-20!86;UBERON:0001017!2.93e-20!82;UBERON:0001049!1.99e-14!57;UBERON:0005068!1.99e-14!57;UBERON:0006241!1.99e-14!57;UBERON:0007135!1.99e-14!57;UBERON:0002346!6.70e-14!90;UBERON:0003075!1.89e-13!86;UBERON:0007284!1.89e-13!86;UBERON:0000955!1.82e-12!69;UBERON:0006238!1.82e-12!69;UBERON:0002616!2.29e-12!59;UBERON:0000924!7.78e-12!173;UBERON:0006601!7.78e-12!173;UBERON:0001893!1.81e-11!34;UBERON:0004121!2.28e-11!169;UBERON:0002020!3.53e-11!34;UBERON:0003528!3.53e-11!34;UBERON:0002791!6.25e-11!33;UBERON:0002780!1.66e-10!41;UBERON:0001890!1.66e-10!41;UBERON:0006240!1.66e-10!41;UBERON:0001869!4.00e-10!32;UBERON:0003080!4.35e-10!42;UBERON:0007023!2.11e-09!115;UBERON:0003056!2.93e-09!61;UBERON:0000956!1.26e-08!25;UBERON:0000203!1.26e-08!25;UBERON:0000153!2.95e-07!129;UBERON:0007811!2.95e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.37e-08;49!UBERON:0001242;4.72e-07;4!UBERON:0001262;4.72e-07;4!UBERON:0004786;4.72e-07;4!UBERON:0004808;4.72e-07;4!UBERON:0001277;4.72e-07;4!UBERON:0000473;9.13e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.09e-07,4;UBERON:0001262,5.09e-07,4;UBERON:0004786,5.09e-07,4;UBERON:0004808,5.09e-07,4;UBERON:0001277,5.09e-07,4;UBERON:0000473,9.01e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,2.86235987131057,0.547497700291537,0.87879847716362,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,7.04641054403633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,11.8954195721123,14.5732226375199,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.221729397462564,0,0.327447688744282,0,0,0,0,0,0.715471872916026,0,0,0.39752481473341,0,0.694281003215189,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1992145155864,27.036072737583,21.6120733737304,15.1345140322441,24.475122534936,8.02950189966826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21379189377604,0,0,0,0,0,0,0,0,3.36198174427723,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,1.54657762555539,1.67516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,6.5264102779476,0,0,0,0,0,0,0.308061348417659,0.784349769176855,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0.984043937099117,0,0.103041011647722,0,0,0.574265537996172,0,0,1.54673149267395,0,0.307007349452259,0,0.107420244868274,0,0,1.33548053470106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,1.91311527274587,1.79621434289535,12.0648383183391,4.86849240264931,0.324621940274555,5.05434920604226,0,0,10.0253790836027,6.77167111206413,0,0,0,0,0,0,0,0,0,0,0.540911356951966,3.3307196799782,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,2.98244294329889,0.281338832821026,0,0,3.1668811219199,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0,0,0,22.4083192606952,0.291604613383254,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,18.4451123510448,46.9432480263108,1.52106320690811,0.638002319463839,0.732780747214898,1.5991043280559,0,0,0,0,0,0,0,0,0,0,1.41353071433941,2.59666367690509,0,0.176915129006678,0,0,0,0,0.67401132980677,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,1.36885967914362,0,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,21.8624281912426,25.7198746436827,22.8492185916052,0,0,0.182248669974074,0,0.0788057072991982,1.57363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.332787154610557,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.92997432237433,1.56596575179127,0,0,0,0,4.94082315457555,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,126.231744476704,36.2291366292851,0,340.078813329931,0,0.425149840203366,0.371807292777007,0,0,0.552032215008773,0,0,0,0.128458450192919,0,0,0,1.00828678488687,0.760729777106397,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,11.785801251664,0,0,0.202612753855184,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,1.00885116665647,0,0,0.975726071789027,0,0,0.135939465953663,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,173.182918459068,0.929931402945002,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,1.90154234056247,0,0,0,0,3.4794432940146,0.971421986118279,0,0.198950775161368,0,0.11294608203896,1.53916723443601,0,0.0771741581079447,1.09279780251979,0,0,1.41405928260976,0.392616934229891,0,1.2679671827502,0,0,0.45120521581504,0,0,0,0,0,0,0.430018749454354,0.473314686579554,0.543931921527318,1.30905207102113,0,0,0,0,18.1679651762514,26.7700651311054,0.126698501011437,12.5446260582638,40.6170456003652,74.6186584222941,27.3271217828689,0.227336094654718,0.535928260312357,0,0,0,0.714193294391221,0.452122368852043,0.806971285846153,0,0.572824424503484,0,0.217716747896961,0.342233301085281,0.202056159043763,0.215166616178029,1.33064142618405,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p2@MYCN | |||
}} |
Revision as of 01:49, 21 January 2014
Short description: | p2@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | -114bp_to_uc010yjr.1_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.82e-22 | 7 |
germ cell | 6.82e-22 | 7 |
neuronal stem cell | 2.57e-17 | 8 |
embryonic stem cell | 2.76e-16 | 5 |
neuron | 8.79e-13 | 6 |
neuroblast | 8.79e-13 | 6 |
electrically signaling cell | 8.79e-13 | 6 |
neurectodermal cell | 7.41e-08 | 59 |
neural cell | 2.28e-07 | 25 |
intestinal epithelial cell | 5.09e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.09e-07 | 4 |
wall of intestine | 5.09e-07 | 4 |
gastrointestinal system mucosa | 5.09e-07 | 4 |
gastrointestinal system epithelium | 5.09e-07 | 4 |
intestinal epithelium | 5.09e-07 | 4 |
testis | 9.01e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.69e-22 | 22 |
germ cell cancer | 7.69e-22 | 22 |
neuroendocrine tumor | 7.96e-09 | 6 |