FFCP PHASE1:Hg19::chr2:145157140..145157151,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1495 | |||
|description=CAGE_peak_at_chr2:145157140..145157151,- | |||
|id=chr2:145157140..145157151,- | |||
|ontology_enrichment_celltype=CL:0000557!2.04e-28!71;CL:0000839!3.58e-28!70;CL:0002194!9.17e-28!63;CL:0000576!9.17e-28!63;CL:0000040!9.17e-28!63;CL:0000559!9.17e-28!63;CL:0002009!3.54e-27!65;CL:0002057!2.38e-26!42;CL:0000766!2.46e-26!76;CL:0000860!3.84e-24!45;CL:0000763!5.48e-21!112;CL:0000049!5.48e-21!112;CL:0002031!1.43e-13!124;CL:0002087!2.46e-13!119;CL:0002032!1.70e-12!165;CL:0000837!1.70e-12!165;CL:0000738!1.84e-12!140;CL:0000037!7.90e-12!172;CL:0000566!7.90e-12!172;CL:0000988!3.22e-11!182;CL:0000134!1.53e-07!358;CL:0000219!1.92e-07!390;CL:0002320!3.55e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.66e-71;33!CL:0002057;4.66e-71;33!CL:0000473;1.58e-59;39!CL:0000234;1.58e-59;39!CL:0000576;8.28e-32;48!CL:0000766;7.72e-22;69!CL:0000763;5.81e-12;100!CL:0002087;2.33e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.77e-63,48;CL:0000234,2.77e-63,48;CL:0000860,4.27e-59,42;CL:0002057,4.27e-59,42;CL:0002194,4.63e-49,59;CL:0000576,4.63e-49,59;CL:0000040,4.63e-49,59;CL:0000559,4.63e-49,59;CL:0002009,3.16e-47,61;CL:0000839,4.05e-43,66;CL:0000557,2.27e-42,67;CL:0000766,9.16e-42,72;CL:0000763,3.53e-29,108;CL:0000049,3.53e-29,108;CL:0002087,1.20e-21,115;CL:0002031,1.93e-20,120;CL:0000738,1.43e-18,136;CL:0002032,6.05e-17,161;CL:0000837,6.05e-17,161;CL:0000037,6.57e-16,168;CL:0000988,1.07e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.61e-44;42!CL:0000049;1.01e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.68e-26!80;UBERON:0001474!3.62e-23!86;UBERON:0004765!1.10e-22!101;UBERON:0001434!1.10e-22!101;UBERON:0002390!2.79e-19!102;UBERON:0003061!2.79e-19!102;UBERON:0002193!4.45e-16!112;UBERON:0002204!8.05e-14!167;UBERON:0002405!3.55e-13!115;UBERON:0001049!3.96e-07!57;UBERON:0005068!3.96e-07!57;UBERON:0006241!3.96e-07!57;UBERON:0007135!3.96e-07!57;UBERON:0002384!6.14e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;2.60e-08;2!UBERON:0010225;2.60e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.65e-36,76;UBERON:0001474,2.62e-33,82;UBERON:0004765,1.06e-29,90;UBERON:0002405,1.66e-28,93;UBERON:0001434,6.35e-28,100;UBERON:0002390,1.12e-26,98;UBERON:0003061,1.12e-26,98;UBERON:0002193,1.58e-23,108;UBERON:0002204,5.35e-16,167;UBERON:0003081,5.38e-10,203;UBERON:0001897,3.90e-08,2;UBERON:0010225,3.90e-08,2 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0.77272670290256,3.05336301437086,1.88937971844405,1.94067248950253,3.0215774797739,1.6446715520873,2.47765096716083,2.3015391385772,2.81776777182011,1.6553756092201,1.03423704220986,1.93645405075148,2.70852973188684,4.32957380947991,2.45615535052061,1.57306439111559,2.75475503133812,0.962787081228281,3.83602275479425,0.989553900560148,2.59302754908121,2.13112375266347,6.38460324982885,2.8369261234557,4.35975574296902,1.7587406567972,2.60741459210101,0.868755378820466,6.05399502633369,1.84138817993782,3.48108626184973,0.211255286311942,0.212604299965044,0.419317291016752,0.336985893439485,0.150176892841506,0.64290234678832,0.570025487482497,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.696518949197069,0.930705723632056,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0,0,0.989067717114227,0,0,0,0.125118519871964,0.277064115484183,0,0.612975591598039,0.751190294532984,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0,0,0.504867548488229,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0.207328115540772,0.432359860250884,0.50496973370552,0.380987365753014,0.381988425558278,0,1.71072446022705,0.205654985406647,0.300343057843917,1.42913216315289,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,1.00451418286425,8.43335757932127,0.479249710983165,0,0,0.144781306667579,0,0.179060963239896,0,0.591092280605782,0.646882724578552,0.128343036279748,0,0,0,0.167516265334349,1.91381625495949,1.49801404789436,0,0,0.12269149171914,0,0,0.623912584592421,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0,0.320182673410333,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0.229628896329213,0.546273504020151,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0.731140468893853,0,0.272999822815972,0.282810863907425,0,0,1.32687795048244,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0,0,0,0,0,0,0.561594356226918,0,0.313359791546046,0,0,0.642352300414798,0.605399121573143,0.425846237690326,1.37402137902306,0.307240764308458,0.671028323677248,0.166849141711909,0.976940477010201,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0.111443384277478,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,1.11321717794222,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,1.52581736317083,0,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0.831058409500782,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0.471807930864739,0,0.468528891450678,0.364909578431332,0,0,0,0,0.30607276163049,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.0967563312890851,0,0,0.290967049465258,0,0.225980740780532,0.137041924646751,0.19871461170299,0.569797163602908,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.684526894459965,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0.328370082997356,0.340776043570843,0,0,0,0.517131825446202,0.39669780522807,0,0,0,0.157204305099666,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,4.88105059607853,0.250381861413,1.14681839138014,0.332787154610557,0.310482014706917,0.138348634936231,0,0,0.856396000634902,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0.604923695052956,0,0.147855149989634,0.477890301491107,0,0.621051827505038,0.414706207840855,0.53168342911599,0,0.450772826991655,0,0.406870733204662,0,0,0.464033759878494,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0,0,0.489473409012935,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0.163565394255844,0.327609848846413,0,0,0,0.106691729694141,0.344429959321631,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,1.91317428091515,0.743614585554013,0.558644917973244,0,0.315446980005013,0,0,0.3062454773532,0.192687675289379,0,0.478901577171454,0.82046545696302,2.01657356977374,0,1.13032951942296,2.85538840518309,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.655087670040387,0,0.472763092328763,0.781078098613847,0.620060389503552,0.317079050969534,1.64092442705466,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0.40781839786099,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0.215927591218621,0.47775168788705,0.357382720883282,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0,0.437119121007915,0,0,0,2.35570160537934,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,1.14671666521161,0,0.135982980381829,1.30905207102113,1.0580536810308,0.743990036333503,0.924351257262837,0.432626562123789,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,2.48750831837634,1.13776295448085,0.852935927603924,0.476128862927481,0.0645889098360061,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:145157140..145157151,- | |||
}} |
Revision as of 05:43, 21 January 2014
Short description: | p@chr2:145157140..145157151, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr2:145157140..145157151, - |
Coexpression cluster: | C1495_CD14_Monocytederived_parietal_medial_occipital_spinal_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.77e-63 | 48 |
phagocyte | 2.77e-63 | 48 |
classical monocyte | 4.27e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-59 | 42 |
monopoietic cell | 4.63e-49 | 59 |
monocyte | 4.63e-49 | 59 |
monoblast | 4.63e-49 | 59 |
promonocyte | 4.63e-49 | 59 |
macrophage dendritic cell progenitor | 3.16e-47 | 61 |
myeloid lineage restricted progenitor cell | 4.05e-43 | 66 |
granulocyte monocyte progenitor cell | 2.27e-42 | 67 |
myeloid leukocyte | 9.16e-42 | 72 |
myeloid cell | 3.53e-29 | 108 |
common myeloid progenitor | 3.53e-29 | 108 |
nongranular leukocyte | 1.20e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 1.93e-20 | 120 |
leukocyte | 1.43e-18 | 136 |
hematopoietic oligopotent progenitor cell | 6.05e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.05e-17 | 161 |
hematopoietic stem cell | 6.57e-16 | 168 |
hematopoietic cell | 1.07e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.65e-36 | 76 |
bone element | 2.62e-33 | 82 |
skeletal element | 1.06e-29 | 90 |
immune system | 1.66e-28 | 93 |
skeletal system | 6.35e-28 | 100 |
hematopoietic system | 1.12e-26 | 98 |
blood island | 1.12e-26 | 98 |
hemolymphoid system | 1.58e-23 | 108 |
musculoskeletal system | 5.35e-16 | 167 |
lateral plate mesoderm | 5.38e-10 | 203 |
dorsal plus ventral thalamus | 3.90e-08 | 2 |
thalamic complex | 3.90e-08 | 2 |