FFCP PHASE1:Hg19::chr2:113522177..113522228,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26877 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBE0,F5H0M5 | |||
|association_with_transcript=0bp_to_ENST00000435431,ENST00000481732,ENST00000541405_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_CKAP2L_5end | |||
|id=chr2:113522177..113522228,- | |||
|ontology_enrichment_celltype=CL:0000548!2.12e-12!679;CL:0000004!2.12e-12!679;CL:0000255!2.12e-12!679;CL:0000012!6.03e-12!682;CL:0000066!1.84e-10!254;CL:0002319!9.94e-08!25;CL:0000055!1.44e-07!180;CL:0000133!6.38e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.45e-08;25!CL:0000095;9.05e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.80e-11,253;CL:0002319,7.24e-08,25;CL:0000133,5.81e-07,59;CL:0000095,9.56e-07,17;CL:0000123,9.56e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.16e-58!235;DOID:14566!2.38e-57!239;DOID:0050687!1.90e-29!143;DOID:0050686!7.66e-27!137;DOID:305!2.83e-21!106;DOID:2531!3.52e-18!51;DOID:0060083!3.52e-18!51;DOID:1240!5.71e-15!39;DOID:8692!5.49e-11!31;DOID:7!8.74e-08!39;DOID:1115!4.67e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.63e-12;39!DOID:2531;1.21e-11;51!DOID:0060083;1.21e-11;51!DOID:8692;5.61e-11;31!DOID:0050687;7.79e-08;143!DOID:14566;4.47e-07;239!DOID:0050686;4.93e-07;137!DOID:1115;6.11e-07;20!DOID:305;7.89e-07;106!DOID:162;9.93e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.95e-58,235;DOID:14566,4.25e-57,239;DOID:0050687,2.65e-29,143;DOID:0050686,1.88e-26,137;DOID:305,3.37e-21,106;DOID:2531,1.50e-18,51;DOID:0060083,1.50e-18,51;DOID:1240,2.87e-15,39;DOID:8692,3.39e-11,31;DOID:7,4.96e-08,39;DOID:1115,6.31e-07,20 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@CKAP2L | |||
}} |
Revision as of 04:57, 21 January 2014
Short description: | p1@CKAP2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CKAP2L_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000435431, ENST00000481732, ENST00000541405_5end |
EntrezGene: | CKAP2L |
HGNC: | 26877 |
UniProt: | F8WBE0F5H0M5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.80e-11 | 253 |
neural cell | 7.24e-08 | 25 |
neurectodermal cell | 5.81e-07 | 59 |
neuron associated cell | 9.56e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 9.56e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.95e-58 | 235 |
disease of cellular proliferation | 4.25e-57 | 239 |
cell type cancer | 2.65e-29 | 143 |
organ system cancer | 1.88e-26 | 137 |
carcinoma | 3.37e-21 | 106 |
hematologic cancer | 1.50e-18 | 51 |
immune system cancer | 1.50e-18 | 51 |
leukemia | 2.87e-15 | 39 |
myeloid leukemia | 3.39e-11 | 31 |
disease of anatomical entity | 4.96e-08 | 39 |
sarcoma | 6.31e-07 | 20 |