FFCP PHASE1:Hg19::chr22:37633537..37633546,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr22:37633537..37633546,- | |||
|id=chr22:37633537..37633546,- | |||
|ontology_enrichment_celltype=CL:0002586!1.35e-26!3;CL:0000149!4.13e-20!4;CL:0002274!2.23e-15!5;CL:0000457!2.23e-15!5;CL:0002191!2.23e-15!5;CL:0000097!2.23e-15!5;CL:0000831!2.23e-15!5;CL:0002028!2.23e-15!5;CL:0000163!5.74e-15!9;CL:0000077!3.94e-11!19;CL:0000151!4.28e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002586;6.61e-74;3!CL:0000149;1.07e-55;4!CL:0000077;2.32e-21;19!CL:0000147;1.52e-16;14!CL:0002097;1.14e-13;2!CL:0000174;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.14e-74,3;CL:0000149,4.58e-56,4;CL:0000077,2.86e-21,19;CL:0000147,1.20e-16,14;CL:0002097,1.55e-13,2;CL:0000174,1.81e-09,3;CL:0000213,2.90e-07,58;CL:0000215,2.90e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!1.36e-09!1;DOID:10165!1.36e-09!1;DOID:1798!1.36e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001781!1.35e-26!3;UBERON:0001782!1.35e-26!3;UBERON:0005424!1.35e-26!3;UBERON:0000966!3.29e-16!5;UBERON:0005388!3.29e-16!5;UBERON:0001802!3.29e-16!5;UBERON:0007625!1.22e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;6.61e-74;3!UBERON:0001782;6.61e-74;3!UBERON:0000966;9.21e-45;5!UBERON:0005388;9.21e-45;5!UBERON:0001802;9.21e-45;5!UBERON:0007625;7.74e-21;11!UBERON:0000019;2.19e-12;19!UBERON:0000047;2.19e-12;19!UBERON:0004088;2.19e-12;19!UBERON:0010230;2.19e-12;19!UBERON:0000970;8.42e-12;20!UBERON:0002104;2.85e-11;21!UBERON:0001456;2.85e-11;21!UBERON:0000020;2.37e-10;23!UBERON:0001032;6.01e-10;24!UBERON:0004456;6.01e-10;24!UBERON:0002369;1.47e-09;3!UBERON:0001235;1.47e-09;3!UBERON:0006858;1.47e-09;3!UBERON:0010371;2.64e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.14e-74,3;UBERON:0005424,2.14e-74,3;UBERON:0001781,4.58e-56,4;UBERON:0000966,1.04e-37,6;UBERON:0005388,1.04e-37,6;UBERON:0001802,1.04e-37,6;UBERON:0007625,5.70e-21,11;UBERON:0000019,7.13e-12,20;UBERON:0000047,7.13e-12,20;UBERON:0010312,7.13e-12,20;UBERON:0004088,7.13e-12,20;UBERON:0010230,7.13e-12,20;UBERON:0003072,7.13e-12,20;UBERON:0004128,7.13e-12,20;UBERON:0003071,7.13e-12,20;UBERON:0000970,2.43e-11,21;UBERON:0002104,2.43e-11,21;UBERON:0001456,7.41e-11,22;UBERON:0000020,5.23e-10,24;UBERON:0001032,5.23e-10,24;UBERON:0004456,5.23e-10,24;UBERON:0002369,1.81e-09,3;UBERON:0001235,1.81e-09,3;UBERON:0006858,1.81e-09,3;UBERON:0005085,6.85e-08,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,2.61460037580088,3.39908170018994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,1.53870075069834,1.64007322849853,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,1.52322084867518,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:37633537..37633546,- | |||
}} |
Revision as of 15:48, 21 January 2014
Short description: | p@chr22:37633537..37633546, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37633537..37633546, - |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.14e-74 | 3 |
visual pigment cell | 4.58e-56 | 4 |
mesothelial cell | 2.86e-21 | 19 |
pigment cell | 1.20e-16 | 14 |
cortical cell of adrenal gland | 1.55e-13 | 2 |
steroid hormone secreting cell | 1.81e-09 | 3 |
lining cell | 2.90e-07 | 58 |
barrier cell | 2.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.14e-74 | 3 |
presumptive retinal pigmented epithelium | 2.14e-74 | 3 |
layer of retina | 4.58e-56 | 4 |
retina | 1.04e-37 | 6 |
photoreceptor array | 1.04e-37 | 6 |
posterior segment of eyeball | 1.04e-37 | 6 |
pigment epithelium of eye | 5.70e-21 | 11 |
camera-type eye | 7.13e-12 | 20 |
simple eye | 7.13e-12 | 20 |
immature eye | 7.13e-12 | 20 |
ocular region | 7.13e-12 | 20 |
eyeball of camera-type eye | 7.13e-12 | 20 |
optic cup | 7.13e-12 | 20 |
optic vesicle | 7.13e-12 | 20 |
eye primordium | 7.13e-12 | 20 |
eye | 2.43e-11 | 21 |
visual system | 2.43e-11 | 21 |
face | 7.41e-11 | 22 |
sense organ | 5.23e-10 | 24 |
sensory system | 5.23e-10 | 24 |
entire sense organ system | 5.23e-10 | 24 |
adrenal gland | 1.81e-09 | 3 |
adrenal cortex | 1.81e-09 | 3 |
adrenal/interrenal gland | 1.81e-09 | 3 |
ectodermal placode | 6.85e-08 | 31 |